KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:53 2014 Check: 00 .. Name: bmy_19718T0/1-887 Len: 988 Check: 3905 Weight: 1.00 Name: ENSTTRP00000002780/1-892 Len: 988 Check: 4140 Weight: 1.00 Name: ENSBTAP00000024713/1-965 Len: 988 Check: 3720 Weight: 1.00 Name: BACU007521/1-708 Len: 988 Check: 6882 Weight: 1.00 Name: ENSP00000384109/1-913 Len: 988 Check: 5602 Weight: 1.00 // 1 50 bmy_19718T0/1-887 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002780/1-892 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024713/1-965 LQTPSRSFSR HHPSLPASHS GSSNPELRRC LEGPPPPSFP PSLPPFSSPP BACU007521/1-708 ---------- ---------- ---------- ---------- ---------- ENSP00000384109/1-913 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_19718T0/1-887 ---------- ----MKSVCS VTSGFSSPNP SAAAAAVQEV RSATDGNTST ENSTTRP00000002780/1-892 ---------- ---------- ----FSSPNP SAAAAAAQEV RSATDGNTST ENSBTAP00000024713/1-965 PQVLQTWGLR DLGAMKSVCP VTSGFSSPNP S-AAAAAQEV RSATDGNTST BACU007521/1-708 ---------- ------MLPK EVYSFSSPNP SAAAAAAQEV RSATDGNTST ENSP00000384109/1-913 -MMSQSSGSG DGNDDEATTS KDGGFSSPSP S-AAAAAQEV RSATDGNTST 101 150 bmy_19718T0/1-887 TPPCSAKKRK LNSSSSSSGS NSSNEREDFD STSPSSST-P LQPRDSASPS ENSTTRP00000002780/1-892 TPPTSAKKRK LNSSSSSSGS NSSNEREDFD STSPSSST-P LQPRDSASPS ENSBTAP00000024713/1-965 TPPTSAKKRK LNSSSSSSGS NSSNEREDFD STSSSSSTPP LQPRDSASPS BACU007521/1-708 TPPTSAKKRK LNSSSSSSGS NSSNEREDFD STSPSSST-P LQPRDSASPS ENSP00000384109/1-913 TPPTSAKKRK LNSSSSSS-S NSSNEREDFD STSSSSSTPP LQPRDSASPS 151 200 bmy_19718T0/1-887 TSSFSCLGVS VAAPSHVPIQ KKLRFEDTLE FVGFDAKMAE ESSSSSSSSS ENSTTRP00000002780/1-892 TSSFSCLGVS VAAPSHVPIQ KKLRFEDTLE FVGFDAKMAE ESSSSSSSSS ENSBTAP00000024713/1-965 TSSFSCLGVP VTAPSHVPIQ KKLRFEENLE FVGFDAKMAE E-SSSSSSSS BACU007521/1-708 TSSFSCLGVS VAAPSHVPIQ KKLRFEDTLE FVGFDAKMAE ESSSSSSSSS ENSP00000384109/1-913 TSSF-CLGVS VAASSHVPIQ KKLRFEDTLE FVGFDAKMAE ESSSSSSSSS 201 250 bmy_19718T0/1-887 PTAATSQQQQ LKNKSILISS VASVHHANGL AKSSTTVSSF ANSKPGSAKK ENSTTRP00000002780/1-892 PTAATSQQQQ LKNKSILISS VASVHHANGL AKSSTTVSSF ANSKPGSAKK ENSBTAP00000024713/1-965 PTAATSQQQQ LKNKSILIST VASVHHANGL AKSSTTVSSF ANSKPGSAKK BACU007521/1-708 PTAATSQQQQ LKNKSILISS VASVHHANGL AKSSTTVSSF ANSKPGSAKK ENSP00000384109/1-913 PTAATSQQQQ LKNKSILISS VASVHHANGL AKSSTTVSSF ANSKPGSAKK 251 300 bmy_19718T0/1-887 LVIKNFKDKP KLPENYTDET WQKLKEAVEA IQNSTSIKYN LEELYQAVEN ENSTTRP00000002780/1-892 LVIKNFKDKP KLPENYTDET WQKLKEAVEA IQNSTSIKYN LEELYQAVEN ENSBTAP00000024713/1-965 LVIKNFKDKP KLPENYTDET WQKLKEAVEA IQNSTSIKYN LEELYQAVEN BACU007521/1-708 LVIKNFKDKP KLPENYTDET WQKLKEAVEA IQNSTSIKYN LEELYQ---- ENSP00000384109/1-913 LVIKNFKDKP KLPENYTDET WQKLKEAVEA IQNSTSIKYN LEELYQAVEN 301 350 bmy_19718T0/1-887 LCSYKISANL YKQLRQICED HIKAQIHQFR EDSLDSVLFL KKIDRCWQNH ENSTTRP00000002780/1-892 LCSYKISANL YKQLRQICED HIKAQIHQFR EDSLDSVLFL KKIDRCWQNH ENSBTAP00000024713/1-965 LCSYKISANL YKQLRQICED HIKAQIHQFR EYSLDSVLFL KKIDRCWQNH BACU007521/1-708 ---------- ---------- ---------- ---------- ---------- ENSP00000384109/1-913 LCSYKISANL YKQLRQICED HIKAQIHQFR EDSLDSVLFL KKIDRCWQNH 351 400 bmy_19718T0/1-887 CRQMIMIRSI FLFLDRTYVL QNSMLPSIWD MGLELFRAHI ISDQKVQNKT ENSTTRP00000002780/1-892 CRQMIMIRSI FLFLDRTYVL QNSMLPSIWX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000024713/1-965 CRQMIMIRSI FLFLDRTYVL QNSMLPSIWD MGLELFRAHI ISDQKVQNKT BACU007521/1-708 ----IMIRSI FLFLDRTYVL QNSMLPSIWD MGLELFRAHI ISDQKVQNKT ENSP00000384109/1-913 CRQMIMIRSI FLFLDRTYVL QNSMLPSIWD MGLELFRAHI ISDQKVQNKT 401 450 bmy_19718T0/1-887 IDGILLLIER ERNGEAIDRS LLRSLLSMLS DLQIYQDSFE QRFLEETNRL ENSTTRP00000002780/1-892 IDGILLLIER ERNGEAIDRS LLRSLLSMLS DLQIYQDSFE QRFLEETNRL ENSBTAP00000024713/1-965 IDGILLLIER ERNGEAIDRS LLRSLLSMLS DLQIYQDSFE QRFLEETNRL BACU007521/1-708 IDGILLLIER ERNGEAIDRS LLRSLLSMLS DLQIYQDSFE QRFLEETNRL ENSP00000384109/1-913 IDGILLLIER ERNGEAIDRS LLRSLLSMLS DLQIYQDSFE QRFLEETNRL 451 500 bmy_19718T0/1-887 YAAEGQKLMQ EREVPEYLHH VNKRLEEEAD RLITYLDQTT QKSLIATVEK ENSTTRP00000002780/1-892 YAAEGQKLMQ EREVPEYLHH VNKRLEEEAD RLITYLDQTT QKSLIATVEK ENSBTAP00000024713/1-965 YAAEGQKLMQ EREVPEYLHH VNKRLEEEAD RLITYLDQTT QKSLIATVEK BACU007521/1-708 YAAEGQKLMQ EREVPEYLHH VNKRLEEEAD RLITYLDQTT QKSLIATVEK ENSP00000384109/1-913 YAAEGQKLMQ EREVPEYLHH VNKRLEEEAD RLITYLDQTT QKSLIATVEK 501 550 bmy_19718T0/1-887 QLLGEHLTAI LQKGLNNLLD ENRIQDLSLL YQLFSRVRGG VQVLLQQWIE ENSTTRP00000002780/1-892 QLLGEHLTAI LQKXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000024713/1-965 QLLGEHLTAI LQKGLNNLLD ENRIQDLSLL YQLFSRVRGG VQVLLQQWIE BACU007521/1-708 QLLGEHLTAI LQK------- ---------- ---------- ---------- ENSP00000384109/1-913 QLLGEHLTAI LQKGLNNLLD ENRIQDLSLL YQLFSRVRGG VQVLLQQWIE 551 600 bmy_19718T0/1-887 YIKAFGSTIV INPEKDKTMV QELLDFKDKV DHIIDICFLK NEKFINAMKE ENSTTRP00000002780/1-892 XXXXXXXXXX XXXXXDKTMV QELQDFKDKV DHIIDICFLK NEKFINAMKE ENSBTAP00000024713/1-965 YIKAFGSTIV INPEKDKTMV QELLDFKDKV DHIIDICFLK NEKFINAMKE BACU007521/1-708 ---------- ---------- ---------- ---------- ---------- ENSP00000384109/1-913 YIKAFGSTIV INPEKDKTMV QELLDFKDKV DHIIDICFLK NEKFINAMKE 601 650 bmy_19718T0/1-887 AFETFINKRP NKPAELIAKY VDSKLRAGNK EATDEELEKM LDKIMIIFRF ENSTTRP00000002780/1-892 AFETFINKRP NKPAELIAKY VDSKLRAGNK EATDEELEKM LDKIMIIFRF ENSBTAP00000024713/1-965 AFETFINKRP NKPAELIAKY VDSKLRAGNK EATDEELEKM LDKIMIIFRF BACU007521/1-708 ---------- -------AKY VDSKLRAGNK EATDEELEKM LDKIMIIFRF ENSP00000384109/1-913 AFETFINKRP NKPAELIAKY VDSKLRAGNK EATDEELEKM LDKIMIIFRF 651 700 bmy_19718T0/1-887 IYGKDVFEAF YKKDLAKRLL VGKSASVDAE KSMLSKLKHE CGAAFTSKLE ENSTTRP00000002780/1-892 IYGKDVFEAF YKKDLAKRLL VGKSASVDAE KSMLSKLKHE CGAAFTSKLE ENSBTAP00000024713/1-965 IYGKDVFEAF YKKDLAKRLL VGKSASVDAE KSMLSKLKHE CGAAFTSKLE BACU007521/1-708 IYGKDVFEAF YKKDLAKRLL VGKSASVDAE KSMLSKLKHE CGAAFTSKLE ENSP00000384109/1-913 IYGKDVFEAF YKKDLAKRLL VGKSASVDAE KSMLSKLKHE CGAAFTSKLE 701 750 bmy_19718T0/1-887 GMFKDMELSK DIMIQFKQ-- ---------- ---------Y MQNQNVPGNI ENSTTRP00000002780/1-892 GMFKDMELSK DIMIQFKQ-- ---------- ---------Y MQNQNVPGNI ENSBTAP00000024713/1-965 GMFKDMELSK DIMIQFKQ-- ---------- ---------Y MQNQNVPGNI BACU007521/1-708 GMFKDMELSK DIMIQFKQVT PCKQAVEQVK NRRLGLAGGY MQNQNVPGNI ENSP00000384109/1-913 GMFKDMELSK DIMIQFKQ-- ---------- ---------Y MQNQNVPGNI 751 800 bmy_19718T0/1-887 ELTVNILTMG YWPTYVPMEV HLPPEMVKLQ EIFKTFYLGK HSGRKLQWQS ENSTTRP00000002780/1-892 ELTVNILTMG YWPTYVPMEV HLPPEMVKLQ EIFKTFYLGK HSGRKLQWQS ENSBTAP00000024713/1-965 ELTVNILTMG YWPTYVPMEV HLPPEMVKLQ EIFKTFYLGK HSGRKLQWQS BACU007521/1-708 ELTVNILTMG YWPTYVPMEV HLPPEMVKLQ EIFKTFYLGK HSGRKLQWQS ENSP00000384109/1-913 ELTVNILTMG YWPTYVPMEV HLPPEMVKLQ EIFKTFYLGK HSGRKLQWQS 801 850 bmy_19718T0/1-887 TLGHCVLKAE FKEVGSHLNP TL-------- -------NIP AFLDNVNPKD ENSTTRP00000002780/1-892 TLGHCVLKAE FKEGKKELQV SLFQTLVLLM FNEGEEFSLE EIKQATGIED ENSBTAP00000024713/1-965 TLGHCVLKAE FKEGKKELQV SLFQTLVLLM FNEGEEFSLE EIKQATGIED BACU007521/1-708 TLGHCVLKAE FKEGKKELQV SLFQTLVLLM FNEGEEFSLE EIKQATGIED ENSP00000384109/1-913 TLGHCVLKAE FKEGKKELQV SLFQTLVLLM FNEGEEFSLE EIKQATGIED 851 900 bmy_19718T0/1-887 GELRRTLQSL ACGKARVLAK NPKGKDIEDG DKFICNDDFK HKLFRIKINQ ENSTTRP00000002780/1-892 GELRRTLQSL ACGKARVLAK NPKGKDIEDG DKFICNDDFK HKLFRIKINQ ENSBTAP00000024713/1-965 GELRRTLQSL ACGKARVLAK NPKGKDIEDG DKFICNDDFK HKLFRIKINQ BACU007521/1-708 GELRRTLQSL ACGKARVLAK NPKGKDIEDG DKFICNDDFK HKLFRIKINQ ENSP00000384109/1-913 GELRRTLQSL ACGKARVLAK NPKGKDIEDG DKFICNDDFK HKLFRIKINQ 901 950 bmy_19718T0/1-887 IQMKETVEEQ ASTTERVFQD RQYQIDAAIV RIMKMRKTLS HNLLVSEVYN ENSTTRP00000002780/1-892 IQMKETVEEQ ASTTERVFQD RQYQIDAAIV RIMKMRKTLS HNLLVSEVYN ENSBTAP00000024713/1-965 IQMKETVEEQ ASTTERVFQD RQYQIDAAIV RIMKMRKTLS HNLLVSEVYN BACU007521/1-708 IQMKET---- ---------- ---------- ---------- ---------- ENSP00000384109/1-913 IQMKETVEEQ ASTTERVFQD RQYQIDAAIV RIMKMRKTLS HNLLVSEVYN 951 1000 bmy_19718T0/1-887 QLKFPVKPAD LKKRIESLID RDYMERDKEN PNQYNYIA ENSTTRP00000002780/1-892 QLKFPVKPAD LKKRIESLID RDYMERDKEN PNQYNYIA ENSBTAP00000024713/1-965 QLKFPVKPAD LKKRIESLID RDYMERDKEN PNQYNYIA BACU007521/1-708 -------PAD LKKRIESLID RDYMERDKEN PNQYNYIA ENSP00000384109/1-913 QLKFPVKPAD LKKRIESLID RDYMERDKEN PNQYNYIA