KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:53 2014 Check: 00 .. Name: ENSP00000307607/1-309 Len: 372 Check: 7495 Weight: 1.00 Name: ENSBTAP00000024714/1-309 Len: 372 Check: 270 Weight: 1.00 Name: ENSTTRP00000015977/1-247 Len: 372 Check: 8151 Weight: 1.00 Name: bmy_18225T0/1-265 Len: 372 Check: 7911 Weight: 1.00 Name: BACU002322/1-372 Len: 372 Check: 8922 Weight: 1.00 // 1 50 ENSP00000307607/1-309 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024714/1-309 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015977/1-247 ---------- ---------- ---------- ---------- ---------- bmy_18225T0/1-265 ---------- ---------- ---------- ---------- ---------- BACU002322/1-372 MVPVGSLPFL SSESATRRDV YITLLGFFHF CRKYELHGVS KLRGIGYRGP 51 100 ENSP00000307607/1-309 ---------- ---MSFNLQS SKKLFIFLGK SLFSLLEAMI FALLPKPRKN ENSBTAP00000024714/1-309 ---------- ---MALKLKA AKKLLIFLGK SVLALVEAVV FVIIPKPRKN ENSTTRP00000015977/1-247 ---------- ---------- ---------- ---------- ---------- bmy_18225T0/1-265 ---------- ---MPPNLNS VKNFFVFLGK SVFALLEVMV FTLIPRPQKS BACU002322/1-372 HGSLSCFIGV SQNMAPNLNS VKNLFVFLGK SVFALLEVMV FTFIPRPQKS 101 150 ENSP00000307607/1-309 VAGEIVLITG AGSGLGRLLA LQFARLGSVL VLWDINKEGN EETCKMAREA ENSBTAP00000024714/1-309 VAGEIVLITG AGSGLGRLLA LKFAQLGSVL VLWDISQESN EETCKMAVEA ENSTTRP00000015977/1-247 ---------- ---------- ----RLGSVL VLWDVSQEGN EETCKMAQEA bmy_18225T0/1-265 VAGEIVLITG SGSGLGRLLA LKFARLGSVL VLWDVSQEGN EETSKMAWEA BACU002322/1-372 VAGEIVLITG SGSGLGRLLA LKFARLGSVL VLWDVSKEGN EETSKMACEA 151 200 ENSP00000307607/1-309 GATRVHAYTC DCSQKEGVYR VADQVKKEVG DVSILINNAG IVTGKKFLDC ENSBTAP00000024714/1-309 GATRVYAYTC DCSRKEEIYR VANQVKKEVG DASILINNAG IVTGRKFMDC ENSTTRP00000015977/1-247 G-TGVYAYTC DCSRKEEVYR VADQVKKEVG DVSILINNAG IVTGKKFLDC bmy_18225T0/1-265 GATKVYAYTC DCSRKEEVYR VADQ------ ---------- ---------- BACU002322/1-372 GAAKVYTYTC DCSRKEEVYR VADQVKKEVG DVSILINNAG IVTGKKFLDC 201 250 ENSP00000307607/1-309 PDELMEKSFD VNFKAHLWTY KAFLPAMIAN DHGHLVCISS SAGLSGVNGL ENSBTAP00000024714/1-309 PDELIEKSLD VNFKSHIWTY KAFLPAMIAN NRGHLVCISS SAGLIGMNGL ENSTTRP00000015977/1-247 PDELMEKSFD VNFKAHLWXX XXXXXXXIAN DHGHLVCISS SAGLIGVNGL bmy_18225T0/1-265 ---------- --------TY KAFLPAMIAN DHGHLVCISS SAGLIGVNGL BACU002322/1-372 PDELMEKSID VNFKAHLWTY KAFLPAMIAN DHGHLVCISS SAGLIGVNGL 251 300 ENSP00000307607/1-309 ADYCASKFAA FGFAESVFVE TFVQKQKGIK TTIVCPFFIK TGMFEGCTTG ENSBTAP00000024714/1-309 ADYCASKFAA YGFAESIFLE SFTKGQNGIK TTIVCPFFIK TGMFDGCTTG ENSTTRP00000015977/1-247 ADYCASKFAA FGFAESVFME TFAKKQNGIK TTIVCPFFIN TGMFDGCTTG bmy_18225T0/1-265 ADYCATKFAA FGFAESVFME TFAKKQNGIK TTIVCPFFIN TGMFDGCTTG BACU002322/1-372 ADYCATKFAA FGFAESVFME TFAKKQNGVK TTIVCPFFIN TGMFDGCTTG 301 350 ENSP00000307607/1-309 CPSLLPILEP KYAVEKIVEA ILQEKMYLYM PKLLYFMMFL KSFLPLKTGL ENSBTAP00000024714/1-309 CPSLLPILEP EYAVRKIVDA ILQENMYLYM PKFIYFIVFL KSFLPLKLGL ENSTTRP00000015977/1-247 CPSLLPILEP EYAVRKIVDA ILQEKSYLYM PRFIYFIVFL KSFLPLKLGM bmy_18225T0/1-265 CPFLLPILEP EYAVRKIVDA ILQDKPYLYM PRFMYFIVFL KSFLPLKLGM BACU002322/1-372 CTFLLPILEP EYAVRKIVAA ILQEKPYLYM PRFMYFIVFL KSFLPLKIGM 351 400 ENSP00000307607/1-309 LIADYLGILH AMDGFVDQKK KL ENSBTAP00000024714/1-309 LLGEYLGAFN LMDGFTGAKK KN ENSTTRP00000015977/1-247 LLAEYMGVFN AMDGFCGHKK KD bmy_18225T0/1-265 LLAEYMGIFN SMDGFSGHKK KD BACU002322/1-372 LLAEYMGIFN SMDGFSGHKK KD