KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:55 2014 Check: 00 .. Name: ENSTTRP00000012075/1-752 Len: 804 Check: 8445 Weight: 1.00 Name: ENSP00000264094/1-753 Len: 804 Check: 2179 Weight: 1.00 Name: ENSBTAP00000024724/1-752 Len: 804 Check: 5120 Weight: 1.00 Name: bmy_12433T0/1-803 Len: 804 Check: 8738 Weight: 1.00 Name: BACU010582/1-752 Len: 804 Check: 5129 Weight: 1.00 // 1 50 ENSTTRP00000012075/1-752 MRPVSVWQWS LWGLLLCLLC SSCLGSPSPS TAPEKRAGSQ GLRFRLAGFP ENSP00000264094/1-753 MRPVSVWQWS PWGLLLCLLC SSCLGSPSPS TGPEKKAGSQ GLRFRLAGFP ENSBTAP00000024724/1-752 MGPVSVWQWS LWGLLLCLLC SSCLGSPTPS TAPEKRAGSQ GLRFRLAGFP bmy_12433T0/1-803 MRPVSVWQWS LWGLLLCLLC SSCLGSPSPS TAPEKRAGSQ GLRFRLAGFP BACU010582/1-752 MRPVSVWQWS LWGLLLCLLC SSCLGSPSPS TAPEKRAGSQ GLRFRLAGFP 51 100 ENSTTRP00000012075/1-752 RKPFEGRVEI QRAGEWGTIC DDDFTLQAAH VLCRELGFTE ATGWTHSAKY ENSP00000264094/1-753 RKPYEGRVEI QRAGEWGTIC DDDFTLQAAH ILCRELGFTE ATGWTHSAKY ENSBTAP00000024724/1-752 RKPSEGRVEI QRAGEWGTIC DDDFTLQAAH VLCRELGFTE ATGWTHSAKY bmy_12433T0/1-803 RKPFEGRVEI QRAGEWGTIC DDDFTLQAAH VLCRELGFTE ATGWTHSAKY BACU010582/1-752 RKPFEGRVEI QRAGEWGTIC DDDFTLQAAH VLCRELGFTE ATGWTHSAKY 101 150 ENSTTRP00000012075/1-752 GPGT------ ------GRIW LDNLSCSGTE RSVTECASRG WGNSDCTHDE ENSP00000264094/1-753 GPGT------ ------GRIW LDNLSCSGTE QSVTECASRG WGNSDCTHDE ENSBTAP00000024724/1-752 GPGT------ ------GRIW LDNLSCSGTE RSVTECASRG WGNSDCTHDE bmy_12433T0/1-803 GPGTGSPVPS PLITLPGRIW LDNLSCSGTE RSVTECASRG WGNSDCTHDE BACU010582/1-752 GPGT------ ------GRIW LDNLSCSGTE RSVTECASRG WGNSDCTHDE 151 200 ENSTTRP00000012075/1-752 DAGVICKDER LPGFSDSNVI EVEHHLQVEE VRIRPAVGRG RRPLPVTEGL ENSP00000264094/1-753 DAGVICKDQR LPGFSDSNVI EVEHHLQVEE VRIRPAVGWG RRPLPVTEGL ENSBTAP00000024724/1-752 DAGVICKDER LPGFSDSNVI EVEHHLQVEE VRLRPAVGRG RRPLPVTEGL bmy_12433T0/1-803 DAGVICKDER LPGFSDSNVI EVEHHLQVEE VRLRPAVGRG RRPLPVTEGL BACU010582/1-752 DAGVICKDER LPGFSDSNVI EVEHHLQVEE VRLRPAVGRG RRPLPVTEGL 201 250 ENSTTRP00000012075/1-752 VEVRLPDGWS QVCDKGWSAH NSHVVCGMLG FPSEKRVNVA FY-------- ENSP00000264094/1-753 VEVRLPDGWS QVCDKGWSAH NSHVVCGMLG FPSEKRVNAA FY-------- ENSBTAP00000024724/1-752 VEVRLPDGWS QVCDKGWSAH NSHVICGMLG FPSEKRVNVG FY-------- bmy_12433T0/1-803 VEVRLPDGWS QVCDKGWSAH NSHVVCGMLG FPSEKRVNVA FYRKLRKRAA BACU010582/1-752 VEVRLPDGWS QVCDKGWSAH NSHVVCGMLG FPSEKRVNVA FY-------- 251 300 ENSTTRP00000012075/1-752 ---------- ---------- ---------- -RLLAQRQQH SFGLHGVACV ENSP00000264094/1-753 ---------- ---------- ---------- -RLLAQRQQH SFGLHGVACV ENSBTAP00000024724/1-752 ---------- ---------- ---------- -RLLAQRQQH SFGLHGVACV bmy_12433T0/1-803 KASARRSKPL GRPITKLKAK PKPRVGRGPI KRLLAQRQQH SFGLHGVACV BACU010582/1-752 ---------- ---------- ---------- -RLLAQRQQH SFGLHGVACM 301 350 ENSTTRP00000012075/1-752 GTEAHLSLCS LEFYRANDTT RCPGGGPAVV SCVPSPLYAA SSGQKKXXXX ENSP00000264094/1-753 GTEAHLSLCS LEFYRANDTA RCPGGGPAVV SCVPGPVYAA SSGQKKQQQS ENSBTAP00000024724/1-752 GTEAHLSLCS LEFYRANDTT RCPGGAPAVV SCVPSPLYAA SSGQKK-QQS bmy_12433T0/1-803 GTEAHLSLCS LEFYRANDTT RCPGGAPAVV SCVPSPLYAA SSGQKK-QQS BACU010582/1-752 GTEAHLSLCS LEFYRANDTT RCPGGAPAVV SCVPSPLYAA SSGQKK-QQS 351 400 ENSTTRP00000012075/1-752 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000264094/1-753 KPQGEARVRL KGGAHPGEGR VEVLKASTWG TVCDRKWDLH AASVVCRELG ENSBTAP00000024724/1-752 KPQGEARVRL KGGAHPGEGR VEVLKAGTWG TVCDRKWDLQ AASVVCRELG bmy_12433T0/1-803 KPQGEARVRL KGGAHPGEGR VEVLKAGTWG TVCDRKWDLQ AASVVCRELG BACU010582/1-752 KPQGEARVRL KGGVHPGEGR VEVLKAGTWG TVCDRKWDLQ AASVVCRELG 401 450 ENSTTRP00000012075/1-752 XXXXXXXXXX XRMGQGMGAI HLSEVRCSGQ EPSLWKCPHR NITAEDCSHS ENSP00000264094/1-753 FGSAREALSG ARMGQGMGAI HLSEVRCSGQ ELSLWKCPHK NITAEDCSHS ENSBTAP00000024724/1-752 FGSAREALSG ARMGQGMGAI HLSEVRCSGQ ELSLWKCPHK NITAEDCSHS bmy_12433T0/1-803 FGSAREALSG ARMGQGMGAI HLSEVRCSGQ EPSLWKCPHR NITAEDCSHS BACU010582/1-752 FGSAREALSG ARMGQGMGAI HLSEVRCSGQ EPSLWKCPHR NITAEDCSHS 451 500 ENSTTRP00000012075/1-752 QDAGVRCNLP YTGVETKIRL SGGRSRHEGR VEVQTGGPGS LRWGLICGDD ENSP00000264094/1-753 QDAGVRCNLP YTGAETRIRL SGGRSQHEGR VEVQIGGPGP LRWGLICGDD ENSBTAP00000024724/1-752 QDAGVRCNLP YTGVETKIRL SGGRSRHEGR VEVQIGGPGS FRWGLICGDD bmy_12433T0/1-803 QDAGVRCNLP YTGVETKIRL SGGRSRHEGR VEVQTGGPGS LRWGLICGDD BACU010582/1-752 QDAGVRCNLP YTGVETKIRL SGGRSRHEGR VEVQTGGPGS LRWGLICGDD 501 550 ENSTTRP00000012075/1-752 WGTLEAMVAC RQLGLGYANH GLQETWYWDS GNITEVVMSG VHCTGTELSL ENSP00000264094/1-753 WGTLEAMVAC RQLGLGYANH GLQETWYWDS GNITEVVMSG VRCTGTELSL ENSBTAP00000024724/1-752 WGTLEAMVAC RQLGLGYANH GLQETWYWDS GNVTDVVMSG VRCTGAELSL bmy_12433T0/1-803 WGTLEAMVAC RQLGLGYANH GLQETWYWDS GNITEVVMSG VHCTGTELSL BACU010582/1-752 WGTLEAMVAC RQLGLGYANH GLQETWYWDS GNITEVVMSG VHCTGTELSL 551 600 ENSTTRP00000012075/1-752 DQCAHHGTHV ACKRTGSHFT AGVICSETAS DLLLHSALVQ ETAYIEDRPL ENSP00000264094/1-753 DQCAHHGTHI TCKRTGTRFT AGVICSETAS DLLLHSALVQ ETAYIEDRPL ENSBTAP00000024724/1-752 DQCAHHGTHV TCKRTGSRFT AGVICSETAS DLLLHSALVQ ETAYIEDRPL bmy_12433T0/1-803 DQCAHHGTHV ACKRTGSHFT AGVICSETAS DLLLHSALVQ ETAYIEDRPL BACU010582/1-752 DQCAHHGTHV ACKRTGSHFT AGVICSETAS DLLLHSALVQ ETAYIEDRPL 601 650 ENSTTRP00000012075/1-752 HMLYCAAEEN CLASSARSAN WPYGHRRLLR FSSQIHNLGR ADFRPKAGRH ENSP00000264094/1-753 HMLYCAAEEN CLASSARSAN WPYGHRRLLR FSSQIHNLGR ADFRPKAGRH ENSBTAP00000024724/1-752 HMLYCAAEEN CLASSARSAN WPYGHRRLLR FSSQIHNLGR ADFRPKAGRH bmy_12433T0/1-803 HMLYCAAEEN CLASSARSAN WPYGHRRLLR FSSQIHNLGR ADFRPKAGRH BACU010582/1-752 HMLYCAAEEN CLASSARSAN WPYGHRRLLR FSSQIHNLGR ADFRPKAGRH 651 700 ENSTTRP00000012075/1-752 SWVWHECHGH YHSMDIFTHY DILTPNGTKV AEGHKASFCL EDTECQEDVS ENSP00000264094/1-753 SWVWHECHGH YHSMDIFTHY DILTPNGTKV AEGHKASFCL EDTECQEDVS ENSBTAP00000024724/1-752 SWVWHECHGH YHSMDIFTHY DILTPNGTKV AEGHKASFCL EDTECQEDVS bmy_12433T0/1-803 SWVWHECHGH YHSMDIFTHY DILTPNGTKV AEGHKASFCL EDTECQEDVS BACU010582/1-752 SWVWHECHGH YHSMDIFTHY DILTPNGTKV AEGHKASFCL EDTECQEDVS 701 750 ENSTTRP00000012075/1-752 KRYECANFGE QGITVGCWDL YRHDIDCQWI DITDVKPGNY IL-VVINPNF ENSP00000264094/1-753 KRYECANFGE QGITVGCWDL YRHDIDCQWI DITDVKPGNY ILQVVINPNF ENSBTAP00000024724/1-752 KRYECANFGE QGITVGCWDL YRHDIDCQWI DITDVKPGNY ILQVVINPNF bmy_12433T0/1-803 KRYECANFGE QGITVGCWDL YRHDIDCQWI DITDVKPGNY ILQVVINPNF BACU010582/1-752 KRYECANFGE QGITVGCWDL YRHDIDCQWI DITDVKPGNY ILQVVINPNF 751 800 ENSTTRP00000012075/1-752 EVAESDXXXX XXXXXXXXXX XXXXXXXXXX XXXXSEEANR RFERYPGQTS ENSP00000264094/1-753 EVAESDFTNN AMKCNCKYDG HRIWVHNCHI GDAFSEEANR RFERYPGQTS ENSBTAP00000024724/1-752 EVAESDFTNN AMKCNCKYDG HRIWVHNCHI GDAFSEEANR RFERYPGQTS bmy_12433T0/1-803 EVAESDFTNN AMKCNCKYDG HRIWVHNCHI GDAFSEEANR RFERYPGQTS BACU010582/1-752 EVAESDFTNN AMKCNCKYDG HRIWVHNCHI GDAFSEEANR RFERYPGQTS 801 850 ENSTTRP00000012075/1-752 NQII ENSP00000264094/1-753 NQII ENSBTAP00000024724/1-752 NQII bmy_12433T0/1-803 NQII BACU010582/1-752 NQII