KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:56 2014 Check: 00 .. Name: ENSP00000309189/1-448 Len: 463 Check: 4075 Weight: 1.00 Name: ENSBTAP00000024729/1-455 Len: 463 Check: 3883 Weight: 1.00 Name: ENSTTRP00000014785/1-444 Len: 463 Check: 4792 Weight: 1.00 Name: bmy_18352T0/1-452 Len: 463 Check: 452 Weight: 1.00 Name: BACU012186/1-398 Len: 463 Check: 9408 Weight: 1.00 // 1 50 ENSP00000309189/1-448 MSPLECSECF GDQLLHRTYT WQLTLHSRPN YTRKRDTRSE SLEIPISVVL ENSBTAP00000024729/1-455 MSPLECSECF GDQLLHRTYT WHLTLHSRPN FTRKRDTRSE SLEIPINVVL ENSTTRP00000014785/1-444 MSPLECSECS GDQLLHRTYT WHLTLHLRPN FTRKRDTRSE SLEIPISVFL bmy_18352T0/1-452 MSPLECSECF GDQLLHRTYT WHLTLHSRPN FTRKRDTKSE SLEIPINVVL BACU012186/1-398 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000309189/1-448 PQRGTAEPFP RLHNLYSTPR CAQQAALPRL SRRMASQHSY PLNRFSSVPL ENSBTAP00000024729/1-455 PQRGTAEPFL RLHNLYPTPR CARQAALPRL SRRVVSQHSY PLNRFSSVPL ENSTTRP00000014785/1-444 PQRGTAELFL RLHNLYPTPR WARQASLPRL SRRAVSQHSY LPNRFPSVPL bmy_18352T0/1-452 PQRGTAEPFL RLHNLYPTPH CARQAALPRL SRRAVSQHSY PPDRFPSVPL BACU012186/1-398 -QRGSAEPFL RLHNLYPTPR CARQAALPRL SRRAVSQHSY PLDRFPSVPL 101 150 ENSP00000309189/1-448 DPMERPMSQA DLELDYNPPR VQLSDEMFVF QDGRWVNENC RLQSPYFSPS ENSBTAP00000024729/1-455 DPMERPTSQA DLELDYNPPR VQLSDEMFVF QDGRWVSENC RLQSPYFSPS ENSTTRP00000014785/1-444 DPMESPTSQV DLELDYNPPR VQLSDETFVF QDGRWVSENC RLQSPYFSPS bmy_18352T0/1-452 DPMESPTSQA DLALDYDPPR VQLSDETFVF QDGRWVSENC RLQPPYFSPS BACU012186/1-398 DPRESPTPQA DLALDCDPPR VQLSDETFVF QDGRWVSENC RLQSPYFSPA 151 200 ENSP00000309189/1-448 ASFHHKLHHK RLAKECMLQE ENKSLREENK ALREENRMLS KENKILQVFW ENSBTAP00000024729/1-455 SSFHHKLHHK RLAKECLLQ- ENKTLREENR ALREENRMLR KENKILQVFW ENSTTRP00000014785/1-444 SSFHHKLHHK RLAKECLRQE ENKSLHAENQ SLRVENQTLR EESKILQVLW bmy_18352T0/1-452 SSLHHKLHHK RLAKECLRQE ESKPLRAENK SLRAENRALR EENQILQALW BACU012186/1-398 SSLHHKLHHK RLAKECLRQE ETKSLRAENR ALREENQ--- ----ILQALW 201 250 ENSP00000309189/1-448 EEHKASLGRE ESRAPSPLLH KDSA-SLEVV KKDHVALQVP RGKEDSTLQL ENSBTAP00000024729/1-455 EEHQAALGRD DSRASSPLLH KDNASSLEAM KKET-ALQAH RGRENSTLQL ENSTTRP00000014785/1-444 EVHQAALRRE DGRASSPLLH KDNASSLEAA KKDP-DLQVH GGRESSTLQL bmy_18352T0/1-452 EERQAALGRE DGRASSPLLR RDNASSLEAV KKDP-ELQVH RGRESSTLQL BACU012186/1-398 EERQAALGLE DGRASAPLLR RDNASSLEAV KKDP-ELQVH RGRESSTLQL 251 300 ENSP00000309189/1-448 LREENRALQQ LLEQKQAYWA QAEDTAAPAE ESKPAPSPHE EPCSPGLLQD ENSBTAP00000024729/1-455 LREENRALQQ LLEQRKAYWA QPDEKAASTE EIKPISSPHE EP--HGLLPD ENSTTRP00000014785/1-444 LREENRALQQ LLEQRKAYWA QPDEKAAST- EIKPVPSPHE AP--HGLLPD bmy_18352T0/1-452 LREENRALQQ LLEQRKAYWA PPDEQAAST- EIKPAPSPQE AP--HGLLPD BACU012186/1-398 LQEENRALQQ LLEQRKACWA QQEEQAAST- EIKPAPSPQE AP--HGLLPG 301 350 ENSP00000309189/1-448 QGSGLSSRFE EPKGPPARQE DSKELRALRK MVSNMSGPSG EEEAKVGPGL ENSBTAP00000024729/1-455 PGPGLPSPFE EPKGLPAPPD DSKTLRALRE MVSTLSAQPG EEVGKGGPGL ENSTTRP00000014785/1-444 QGVGLSSPFE EPKGPQAPQE DSKTLRTLHE MLSNLSGQPR EEVGKAGPGL bmy_18352T0/1-452 QGAGLSYPFE EPKGPQGPQE DSKTLRALRE MLSNLSGQPR EEAGKAGPGL BACU012186/1-398 QGAGLSSPFE EPKGPQAAQE DSKTLRALRK MLST---RPG EEAGKAARGL 351 400 ENSP00000309189/1-448 PDGCQPLQLL REMRQALQAL L--------- -----KENRL LQEENRTLQV ENSBTAP00000024729/1-455 PDGSQSLELL REMNQALQAL REEN----QS LQVLRDENRL LQEENRALHA ENSTTRP00000014785/1-444 PDGGQSLELL REMSQALQAL R--------- -----EENRL LQEENRALHV bmy_18352T0/1-452 PDGGQSLELL REMSQALQAL R-------EE NQNLQEENRA LQEENRALHV BACU012186/1-398 PDSGQSLELL REMSQALQAL REENRLLQEE NRLLQEENRA LQEENRALHV 401 450 ENSP00000309189/1-448 LRAEHRGFQE ENKALWENNK LKLQQKLVID TVTEVTARME MLIEELYAFM ENSBTAP00000024729/1-455 LREEHRLFQE ENKALWENNK LKLQQKLVID TVTEVTARME MLIEELYAFM ENSTTRP00000014785/1-444 LREEHRIFQ- ESKALWENNK LKLQQKLVID TVTEVTARME LLIEELYAFI bmy_18352T0/1-452 LREEHRIFQE ESKALWENNK LKLQQKLVID TVTEVTARME MLIEELYAFM BACU012186/1-398 LREEHRIFQE ESKALWENNK LKLQQKLVID TVTEVTARME MLIEELYAFM 451 500 ENSP00000309189/1-448 PARSQDPKKP SRV ENSBTAP00000024729/1-455 PAKSKDPKKP SRV ENSTTRP00000014785/1-444 PTKNKDPKKP SRV bmy_18352T0/1-452 PTKNNNPKKP SRV BACU012186/1-398 PTKNNDPTKP SRV