KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:57 2014 Check: 00 .. Name: ENSTTRP00000008303/1-316 Len: 381 Check: 3697 Weight: 1.00 Name: bmy_00383T0/1-376 Len: 381 Check: 7571 Weight: 1.00 Name: ENSP00000055077/1-354 Len: 381 Check: 1047 Weight: 1.00 Name: BACU012011/1-352 Len: 381 Check: 2512 Weight: 1.00 Name: ENSBTAP00000024740/1-352 Len: 381 Check: 2187 Weight: 1.00 // 1 50 ENSTTRP00000008303/1-316 ---------- ---------- ---------- ---------V EKYRPVKLNE bmy_00383T0/1-376 MEAQESGGGS GECGAQDLDP AP--SKAPGS AGQYELPWSL QEKGMCPISS ENSP00000055077/1-354 MEVEAVCGGA GEVEAQDSDP APAFSKAPGS AGHYELPW-V EKYRPVKLNE BACU012011/1-352 MEAQESGGGS GECGAQDPDP AP--SKAPGS AGQYELPW-V EKYRPVKLNE ENSBTAP00000024740/1-352 MEAQDSGGGT GECGAQDAAP GP--SKAPGS AGHYELPW-V EKYRPVKLNE 51 100 ENSTTRP00000008303/1-316 IVGNEDTVSR LEVFSREGNV PN-------- --IIIAGPPG TGKTTSILCL bmy_00383T0/1-376 LLASS---SR KPMITRAHTI PTSHWSGLRV GCCIDLGPPG TGKTTSILCL ENSP00000055077/1-354 IVGNEDTVSR LEVFAREGNV PN-------- --IIIAGPPG TGKTTSILCL BACU012011/1-352 IVGNEDTVSR LEVFAREGNV PN-------- --IIIAGPPG TGKTTSILCL ENSBTAP00000024740/1-352 IVGNEDTVSR LEVFAREGNV PN-------- --IIIAGPPG TGKTTSILCL 101 150 ENSTTRP00000008303/1-316 ARALLGPAFK DAVLELNASN DR----GIDV VRNKIKMFAQ QKVTLPKGRH bmy_00383T0/1-376 ARALLGPAFK DAVLELNASN DRYTWEGIDV VRNKIKMFAQ QKVTLPKGRH ENSP00000055077/1-354 ARALLGPALK DAMLELNASN DR----GIDV VRNKIKMFAQ QKVTLPKGRH BACU012011/1-352 ARALLGPAFK DAVLELNASN DR----GIDV VRNKIKMFAQ QKVTLPKGRH ENSBTAP00000024740/1-352 ARALLGPALK DAVLELNASN DR----GIDV VRNKIKMFAQ QKVTLPKGRH 151 200 ENSTTRP00000008303/1-316 KIIVLDEADX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXPIQSRC bmy_00383T0/1-376 KIIILDEADS MTDGAQQALR RTMEIYSKTT RFALACNASD KIIEPIQSRC ENSP00000055077/1-354 KIIILDEADS MTDGAQQALR RTMEIYSKTT RFALACNASD KIIEPIQSRC BACU012011/1-352 KIIILDEADS MTDGAQQALR RTMEIYSKTT RFALACNASD KIIEPIQSRC ENSBTAP00000024740/1-352 KIIILDEADS MTDGAQQALR RTMEIYSKTT RFALACNASD KIIEPIQSRC 201 250 ENSTTRP00000008303/1-316 AVLRYTKLTD AQILARLLCV IEQEKVPHTD DGLEAILFTA QGDMRQALNN bmy_00383T0/1-376 AVLRYTKLTD AQILARLLNV IEKEKVQSTD DGLEAILFTA QGDMRQALNN ENSP00000055077/1-354 AVLRYTKLTD AQILTRLMNV IEKERVPYTD DGLEAIIFTA QGDMRQALNN BACU012011/1-352 AVLRYTKLTD GQILARLLNV IEKEKVQSTD DGLEAILFTA QGDMRQALNN ENSBTAP00000024740/1-352 AVLRYTKLTD MQILARLLSV IEKEKVQYTD DGLEAIIFTA QGDMRQALNN 251 300 ENSTTRP00000008303/1-316 LQSTFAGFGF INSENVFKV- ---------- -CDEPHPLLV KEMIQHCVSA bmy_00383T0/1-376 LQSTFSGFGF INSENVFKVD TEVYLVTTLV VCDEPHPLLV KEMIQHCVSA ENSP00000055077/1-354 LQSTFSGFGF INSENVFKV- ---------- -CDEPHPLLV KEMIQHCVNA BACU012011/1-352 LQSTFSGFGF INSENVFKV- ---------- -CDEPHPLLV KEMIQHCVSA ENSBTAP00000024740/1-352 LQSTYSGFGF INSENVFKV- ---------- -CDEPHPLLV KEMIQHCVSA 301 350 ENSTTRP00000008303/1-316 SIDEAYKILA HLWHLGYSPE DIIGNIFRVC KTFQMAEYLK LEFIKEIGYT bmy_00383T0/1-376 SIDEAYKILA HLWHLGYSPE DIIGNIFRVC KTFQMAEYLK LEFIKEIGYT ENSP00000055077/1-354 NIDEAYKILA HLWHLGYSPE DIIGNIFRVC KTFQMAEYLK LEFIKEIGYT BACU012011/1-352 SIDEAYKILA HLWHLGYSPE DIIGNIFRVC KTFQMAEYLK LEFIKEIGYT ENSBTAP00000024740/1-352 DIDEAYKILA HLWHLGYSPE DIIGNIFRVC KTFQMAEYLK LEFIKEIGYT 351 400 ENSTTRP00000008303/1-316 HMKIAEGVNS LLQMAGLLAR LCQKTMAPVA S bmy_00383T0/1-376 HMKIAEGVNS LLQMAGLLAR LCQKTMAPVA S ENSP00000055077/1-354 HMKIAEGVNS LLQMAGLLAR LCQKTMAPVA S BACU012011/1-352 HMKIAEGVNS LLQMAGLLAR LCQKTMAPVA S ENSBTAP00000024740/1-352 HMKIAEGVNS LLQMAGLLAR LCQKTMAPVA S