KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:00 2014 Check: 00 .. Name: ENSP00000210633/1-843 Len: 844 Check: 1886 Weight: 1.00 Name: ENSBTAP00000024759/1-844 Len: 844 Check: 7695 Weight: 1.00 Name: ENSTTRP00000014322/1-774 Len: 844 Check: 8326 Weight: 1.00 Name: bmy_17582T0/1-565 Len: 844 Check: 3944 Weight: 1.00 Name: BACU012392/1-779 Len: 844 Check: 1438 Weight: 1.00 // 1 50 ENSP00000210633/1-843 MWGRLWPLLL SILTATAVPG PSLRRPSREL DATPRMTIPY EELSGTRHFK ENSBTAP00000024759/1-844 MWGRLWPFLL SFLTATAVPG PSLRRPSREL DATPRMTIPY EELSGTRHFK ENSTTRP00000014322/1-774 ---------- ---------- ---------- ---------- ---------- bmy_17582T0/1-565 MWGRLWPLLL SFLTATAVPG PSLRRPSREL DATPRITIPY EELSGTQHFK BACU012392/1-779 MWGRLWPLFL SFLTATAVPG PLLRRPSREL DATPRITIPY EELSGTQHFK 51 100 ENSP00000210633/1-843 GQAQNYSTLL LEEASARLLV GARGALFSLS ANDIGDGAHK EIHWEASPEM ENSBTAP00000024759/1-844 GQAQNYSTLL LEEASARLLV GARGALFSLN AQDIGDGTHK EIRWEASPEM ENSTTRP00000014322/1-774 ---------- -EEASARLLV GARGALFSLN A-NIGDGTHK EIHWEASPEM bmy_17582T0/1-565 GRAQNYSTLL LEEASARLLV GARGALFSLN AHXIGDGTHK EIHWEASPEM BACU012392/1-779 GRAQNYSTLL LEEASARLLV GARGALFSLN AHNIGDGTHK EIHWEASPEM 101 150 ENSP00000210633/1-843 QSKCHQKGKN NQTECFNHVR FLQRLNSTHL YACGTHAFQP LCAAIDAEAF ENSBTAP00000024759/1-844 QSKCHQKGKN NQTECFNHVR FLQRLNATHL YTCGTHAFQP LCAAIDAEAF ENSTTRP00000014322/1-774 QSKCHQKGKN NQTECFNHVR FLQRLNATHL YACGTHAFQP LCAAIDAEAF bmy_17582T0/1-565 QSKCHQKGKN NQTECFNHVR FLQRLNATHL YACGTHAFQP LCAAIDAEAF BACU012392/1-779 QSKCHQKGKN NQTECFNHVR FLQRLNATHL YACGTHAFQP LCAAIDAEAF 151 200 ENSP00000210633/1-843 TLPTSFEEGK EKCPYDPARG FTGLIIDGGL YTATRYEFRS IPDIRRSRHP ENSBTAP00000024759/1-844 TLPTSFEEGK EKCPYDPARG FTGLIIDGGL YTATRYEFRS IPDIRRSRHP ENSTTRP00000014322/1-774 TLPTSFEEGK EKCPYDPARG FTGLIIDGGL YTATRYEFRS IPDIRRSRHP bmy_17582T0/1-565 TLPTSFEEGK EKCPYDPARG FTGLIIDGGL YTATRYEFRS IPDIRRSRHP BACU012392/1-779 TLPTSFEEGK EKCPYDPARG FTGLIIDGGL YTATRYEFRS IPDIRRSRHP 201 250 ENSP00000210633/1-843 HSLRTEETPM HWLNDAEFVF SVLVRESKAS AVGDDDKVYY FFTERATEEG ENSBTAP00000024759/1-844 HSLRTEEAPM HWLNDAEFVF SVLVRESQAS AVGDDDKVYY FFTERAAEEG ENSTTRP00000014322/1-774 HSLRTEEAPM HWLNDAEFVF SVLVRESKAS AAGDDDKVYY FFTERAAEEG bmy_17582T0/1-565 HSLRTEEAPM HWLNDAEFVF SVLVRESKAS AVGDDDKVYY FFTERAAEEG BACU012392/1-779 HSLRTEEAPM HWLNDAEFVF SVLVWESKAS AVGDDDKVYY FFTERAAEEG 251 300 ENSP00000210633/1-843 SGSFTQSRSS HRVARVARVC KGDLGGKKIL QKKWTSFLKA RLICHIPLYE ENSBTAP00000024759/1-844 AGSFAQSRSS HRVARVARVC KGDLGGKKIL QKKWTSFLKA RLICHIPQYE ENSTTRP00000014322/1-774 SGSFAQSRSS HRVARVARVC KXXXXXXXXX XXXXXXXXXX RLICHIPQYE bmy_17582T0/1-565 SGSFAQSRSS HRVARVARVC KGDLGGKKIL QKKWTSFLKA RLICHIPQYE BACU012392/1-779 SGSFAQSRSS HRVARVARVC KGDLGGKKIL QKKWTSFLKA RLICHIPQYE 301 350 ENSP00000210633/1-843 TLRGVCSLDA ETSSRTHFYA AFTLSTQWKT LEASAICRYD LAEIQAVFAG ENSBTAP00000024759/1-844 MLRSVCSLQA DTSAHTHFYA AFTLTTQWKT LEASAICRYD LAEVQAVFAG ENSTTRP00000014322/1-774 TLRGVCSLEA DTSARTHFYA AFTLTTQWKT LEASAICRYD LAEVQAVFAG bmy_17582T0/1-565 TLRGVCSLEA DTSARTHFYA AFTLTTQWKT LEASAICRYD LAEVQAVFAG BACU012392/1-779 TLRGVCSLEA DTSARTHFYA AFTLTTQWKT LEASAICRYD LAEVQAVFAG 351 400 ENSP00000210633/1-843 PYMEYQDGSR RWGRYEGGVP EPRPGSCITD SLRSQGYNSS QDLPSLVLDF ENSBTAP00000024759/1-844 PYMEYQDGVR RWGRYEGGVP EPRPGSCITD SLRSRGYNSS QDLPSLVLDF ENSTTRP00000014322/1-774 PYMEYQDGVR RWGRYEGGVP EPRPGSCITD SLRSRGYNSS QDLPSLVLDF bmy_17582T0/1-565 PYMEYQDGVR RWGRYEGGVP EPRPGSCITD SLRSRGYNSS QDLPSLVLDF BACU012392/1-779 PYMEYQDGVR RWGRYEGGVP EPRPGSCITD SLRSRGYNSS QDLPSLVLDF 401 450 ENSP00000210633/1-843 VKLHPLMARP VVPTRGRPLL LKRNIRYTHL TGTPVTTPAG PTYDLLFLGT ENSBTAP00000024759/1-844 VKLHPLMARP VVPTRGRPLL LKRSVRYTHL TGTPVSTPAG PTYDLLFLGT ENSTTRP00000014322/1-774 VKLHPLMARP VVPTRGRPLL LKRSVRYTHL TGTPVTTPAG PTYDLLFLGT bmy_17582T0/1-565 VKLHPLMARP VVPTRGRPLL LKRSVRYTHL TGTPVTTPAG PTYDLLFLGT BACU012392/1-779 VKLHPLMARP VVPTRGRPLL LKRSVRYTHL TGTPVTTPAG PIYDLLFLGT 451 500 ENSP00000210633/1-843 ADGWIHKAVV LGSGMHIIEE TQVFRESQSV ENLVISLLQH SLYVGAPSGV ENSBTAP00000024759/1-844 ADGWIHKAVV LGSGMHIIEE TQVLKEPQSV ENLVISPMQH SLYVGAPSGI ENSTTRP00000014322/1-774 ADGWIHKAVV LGSGMHIIEE TQVFKEPQSV ENLVISPTQH SLYVGAPSGV bmy_17582T0/1-565 ADGWIHKAVV LGSGMHIIEE TQVFKKPQSV ENLVISPTQH SLYVGAPSGV BACU012392/1-779 ADGWIHKAVV LGSGMHIIEE TQVFKKPQSV ENLVISLTQH SLYVGAPSGV 501 550 ENSP00000210633/1-843 IQLPLSSCSR YRSCYDCILA RDPYCGWDPG THACAAATTI ANRSQGSRTA ENSBTAP00000024759/1-844 IQLPLSSCSR YRSCYDCILA RDPYCGWDPS THACMVTTTI ANRSQSSRTA ENSTTRP00000014322/1-774 IQLSLSSCSR YRSCYDCILA RDPYCGWDPG THTCVVTTTG ANRSQGSRTA bmy_17582T0/1-565 IQLSLSSCSR YRSCYDCILA RDPYCGWDPG THACVVTTTG AN-----RTA BACU012392/1-779 IQLSLSSCSR YRSCYDCILA RDPYCGWDPG NHACVVTTTG ANRSQGSRTA 551 600 ENSP00000210633/1-843 LIQDIERGNR GCESSRDTGP PPPLKTRSVL RGDDVLLPCD QPSNLARALW ENSBTAP00000024759/1-844 LIQDMERGNR GCEGNRDTGP PPPLKTRSVL RGDDVLLPCD QPSNLARALW ENSTTRP00000014322/1-774 LIQDIERGNR GCEGNRDTGP PPPLKTRSVL RGDDVLLPCD QPSNLARALW bmy_17582T0/1-565 LIQDIERGNR GCEGNRDTGK ---------- ---------- ---------- BACU012392/1-779 LIQDLERGNR GCEGNRDTGP PPPLKTRSVL RGDDVLLPCD QPSNLARALW 601 650 ENSP00000210633/1-843 LLNGSMGLSD GQGGYRVGVD GLLVTDAQPE HSGNYGCYAE ENGLRTLLAS ENSBTAP00000024759/1-844 LLNGSMGLSD GQDGYRVGVD GLLVTDTQPE HSGNYGCYAE ENGLRTLLAS ENSTTRP00000014322/1-774 MVNGSMGLSD GQDGYRVGVD GLLVTDTQPE HSGNYGCYAE ENGLRTLLAS bmy_17582T0/1-565 ---------- ---------- ---------- ---------- ---------- BACU012392/1-779 MLNGSMGLSD GQDGYRVGVD GLLVTDTQPE HSGNYGCYAE ENGLRTLLAS 651 700 ENSP00000210633/1-843 YSLTVRPATP APAPKAPATP GAQLAPDVRL LYVLAIAALG GLCLILASSL ENSBTAP00000024759/1-844 YSLTVRPATP APAPQAPAMP GAQLAPDVRL LYVLAIAALG GLCLILASSL ENSTTRP00000014322/1-774 YSLTVRPATP APAPQAPAMP GAQLAPDMRL LYVLAIATLG GLCLILASSL bmy_17582T0/1-565 ---------- ---------- ---------- ---------- ---------- BACU012392/1-779 YSLTVWPATP APAPQAPAMP GAQLAPDMRL LYVLAIATLG GLCLILASSL 701 750 ENSP00000210633/1-843 LYVACLREGR RGRRRKYSLG RASRAGGSAV QLQTVSGQCP GEEDEGDD-E ENSBTAP00000024759/1-844 FYVACLRGGG RGHRRKYSLG RAGRAGGSAV QLQTVSGQCP GEDDDGDDGE ENSTTRP00000014322/1-774 FYVACLRRGG RGHRQKYSLG RAGRAGGSAV QLQTVSGQCS GEED-GDDGE bmy_17582T0/1-565 ---------- ---------- ---------- ---------- ---------- BACU012392/1-779 FYVACLRRGG RGHRQKYSLG RAGRAGGSAV QLQTVSGQCP GEED-GDDGE 751 800 ENSP00000210633/1-843 GAGGLEGSCL QIIPGEGAPA PPPPPPPPPP AELTNGLVAL PSRLRRMNGN ENSBTAP00000024759/1-844 RAGGLEGGCL QIIPGEGTPA PPPPPPPPPP TELTNGLVTL PSRLRRMNGN ENSTTRP00000014322/1-774 GAGGLEGGCL QIIPGE---- ---XXPPPPP AELTNGLVAL PSRLRRMNGN bmy_17582T0/1-565 ---------- ---------- ---------- ---------- ---------- BACU012392/1-779 GAGGLE---- ---------- ---------- ---------- ---------- 801 850 ENSP00000210633/1-843 SYVLLRQSNN GVPAGPCSFA EELSRILEKR KHTQLVEQLD ESSV ENSBTAP00000024759/1-844 SYVLLRQSNN GVPAGPCSFT EELSRILEKR KHTQLVEHLD ESSV ENSTTRP00000014322/1-774 SYVLLRQSNN GVPAGPCSFT EELSRILEKR KHTQLVEHLD ESSV bmy_17582T0/1-565 ---------- ---------- ---------- ---------- ---- BACU012392/1-779 ---------- ---------- EELSRILEKR KHTQLVEHLD ESSV