KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:03 2014 Check: 00 .. Name: ENSTTRP00000007863/1-183 Len: 252 Check: 9936 Weight: 1.00 Name: bmy_17417T0/1-242 Len: 252 Check: 6600 Weight: 1.00 Name: ENSP00000222008/1-185 Len: 252 Check: 8962 Weight: 1.00 Name: BACU018235/1-185 Len: 252 Check: 8704 Weight: 1.00 Name: ENSBTAP00000024793/1-185 Len: 252 Check: 7658 Weight: 1.00 // 1 50 ENSTTRP00000007863/1-183 ---------- ---------- ---------- ---------- ---------- bmy_17417T0/1-242 MPRGVPLRDY ISQSVSRAIP PSWRPLSPTS SGLQLPQCSA AKLPPPEAPD ENSP00000222008/1-185 ---------- ---------- ---------- ---------- ---------- BACU018235/1-185 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024793/1-185 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007863/1-183 ---------- --MAAEKDQQ KDAEVEGLSA TTLLPKLIPS GAGREWLERR bmy_17417T0/1-242 PLHVSCRSAG TDMAAEKDQQ KDAEVEGLSA TTLLPKLIPS GAGREWLERR ENSP00000222008/1-185 ---------- --MAAQKDQQ KDAEAEGLSG TTLLPKLIPS GAGREWLERR BACU018235/1-185 ---------- --MAAEKDQQ KDAEVERLSA TTLLPKLIPS GAGREWLERR ENSBTAP00000024793/1-185 ---------- --MAVEKDQQ KDAEAEGLSA ATLLPKLIPS GAGREWLERR 101 150 ENSTTRP00000007863/1-183 RATIRPWGSF VDQRRFSRPR NVGELCQRLV RNVEYYQSNY VFVFLGLILY bmy_17417T0/1-242 RATIRPWGSF VDQRRFSRPR NLGELCQRLV RNVEYYQSNY VFVFLGLILY ENSP00000222008/1-185 RATIRPWSTF VDQQRFSRPR NLGELCQRLV RNVEYYQSNY VFVFLGLILY BACU018235/1-185 RATIRPWGSF VDQRRFSRPR NLGELCQRLV RNVEYYQSNY VFVFLGLILY ENSBTAP00000024793/1-185 RATIRSWGSF VDQRRFSRPR NLGELCQRLV RNVEYYQSNY VFVFLGLILY 151 200 ENSTTRP00000007863/1-183 CVATSPMLLV ALAVFFGACY ILYLRTLQSK FVLM-----G HGVKSARNHA bmy_17417T0/1-242 CVLVG----- -----WGSQG LLWERARVSE QLPQCRLPPG REVTPAHQYA ENSP00000222008/1-185 CVVTSPMLLV ALAVFFGACY ILYLRTLESK LVLF-----G REVSPAHQYA BACU018235/1-185 CVATSPMLLV ALAVFFGACY ILYLRTLQSK FVLM-----G REVTPAHQYA ENSBTAP00000024793/1-185 CVATSPMLLV ALAVFFGACY ILYLRTLQSK FVLF-----G REVSPAHQYA 201 250 ENSTTRP00000007863/1-183 LAAGLS-PFF CLDGVXXXXX XXXGATLVVI GS-AAFHQVE AVDGVELQME bmy_17417T0/1-242 LAGTVSFPFF WLAGAGSAVF WVLGATLVVI GSHAAFHQVE AMDGEELQME ENSP00000222008/1-185 LAGGISFPFF WLAGAGSAVF WVLGATLVVI GSHAAFHQIE AVDGEELQME BACU018235/1-185 LAGTVSFPFF WLAGAGSAVF WVLGATLVVI GSHAAFHQVE AVDGEELQME ENSBTAP00000024793/1-185 LAGGVSFPFF WLAGAGSAVF WVLGATLVVI GSHAAFHQIE AVDGEELQME 251 300 ENSTTRP00000007863/1-183 PV bmy_17417T0/1-242 PV ENSP00000222008/1-185 PV BACU018235/1-185 PV ENSBTAP00000024793/1-185 PV