KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:04 2014 Check: 00 .. Name: ENSP00000444688/1-1026 Len: 1077 Check: 9461 Weight: 1.00 Name: ENSTTRP00000007871/1-1012 Len: 1077 Check: 9159 Weight: 1.00 Name: ENSBTAP00000024797/1-1033 Len: 1077 Check: 7567 Weight: 1.00 Name: bmy_17415T0/1-973 Len: 1077 Check: 9296 Weight: 1.00 Name: BACU018236/1-1032 Len: 1077 Check: 4819 Weight: 1.00 // 1 50 ENSP00000444688/1-1026 ---------- ---------- ---------- ---------- ----MGSGGS ENSTTRP00000007871/1-1012 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024797/1-1033 ---------- ---------- ---------- ---------- ---RPQSGGS bmy_17415T0/1-973 MRPRGSQRYP EPRGRDRLSP QSQPLPRDAA AQTQGWCLLV TPSRPQSGGS BACU018236/1-1032 ---------- ---------- ---------- ---------- ---RPQSGGS 51 100 ENSP00000444688/1-1026 DSYRIATSQD KKDDKDSPKK NKG-KERRDL DDLKKEVAMT EHKMSVEEVC ENSTTRP00000007871/1-1012 -------MED KKDDKGSPKK GKGTKDRRDL DDLKKEVAMT EHKMSVEEVC ENSBTAP00000024797/1-1033 DSYRVATSQD KKDDKGSPKK SKGTKDRRDL DDLKKEVAMT EHKMSVEEVC bmy_17415T0/1-973 DSYRVATSQD KKDDKGSPKK SKGTKDRRDL DDLKKEVAMT EHKMSVEEVC BACU018236/1-1032 DSYRVATSQD KKDDKGSPKK SKGTKDRRDL DDLKKEVAMT EHKMSVEEVC 101 150 ENSP00000444688/1-1026 RKYNTDCVQG LTHSKAQEIL ARDGPNALTP PPTTPEWVKF CRQLFGGFSI ENSTTRP00000007871/1-1012 RKYNTDCVQG LTHSKAQEIL ARDGPNALTP PPTTPEWVKF CRQLFGGFSI ENSBTAP00000024797/1-1033 RKYNTDCVQG LTHSKAQEIL ARDGPNALTP PPTTPEWVKF CRQLFGGFSI bmy_17415T0/1-973 RKYNTDCVQG LTHSKAQEIL ARDGPNALTP PPTTPEWVKF CRQLFGGFSI BACU018236/1-1032 RKYNTDCVQG LTHSKAQEIL ARDGPNALTP PPTTPEWVKF CRQLFGGFSI 151 200 ENSP00000444688/1-1026 LLWIGAILCF LAYGIQAGTE DDPSGDNLYL GIVLAAVVII TGCFSYYQEA ENSTTRP00000007871/1-1012 LLWIGAILCF LAYGIQAGTE DDPSGDNLYL GIVLAAVVII TGCFSYYQEA ENSBTAP00000024797/1-1033 LLWIGAILCF LAYGIQAGTE DDPSGDNLYL GIVLAAVVII TGCFSYYQEA bmy_17415T0/1-973 LLWIGAILCF LAYGIQAGTE DDPSGDNLYL GIVLAAVVII TGCFSYYQEA BACU018236/1-1032 LLWIGAILCF LAYGIQAGTE DDPSGDNLYL GIVLAAVVII TGCFSYYQEA 201 250 ENSP00000444688/1-1026 KSSKIMESFK NMVPQQALVI REGEKMQVNA EEVVVGDLVE IKGGDRVPAD ENSTTRP00000007871/1-1012 KSSKIMESFK NMVPQQALVI REGEKMQVNA EEVVVGDLVE IKGGDRVPAD ENSBTAP00000024797/1-1033 KSSKIMESFK NMVPQQALVI REGEKMQVNA EEVVVGDLVE IKGGDRVPAD bmy_17415T0/1-973 KSSKIMESFK NMVPQQALVI REGEKMQVNA EEVVVGDLVE IKGGDR---- BACU018236/1-1032 KSSKIMESFK NMVPQQALVI REGEKMQVNA EEVVVGDLVE IKGGDRVPAD 251 300 ENSP00000444688/1-1026 LRIISAHGCK VDNSSLTGES EPQTRSPDCT HDNPLETRNI TFFSTNCVEG ENSTTRP00000007871/1-1012 LRIISAHGCK VDNSSLTGES EPQTRSPDCT HDNPLETRNI TFFSTNCVEG ENSBTAP00000024797/1-1033 LRIISAHGCK VDNSSLTGES EPQTRSPDCT HDNPLETRNI TFFSTNCVEG bmy_17415T0/1-973 ---------- VDNSSLTGES EPQTRSPDCT HDNPLETRNI TFFSTNCVEG BACU018236/1-1032 LRIISAHGCK VDNSSLTGES EPQTRSPDCT HDNPLETRNI TFFSTNCVEG 301 350 ENSP00000444688/1-1026 TARGVVVATG DRTVMGRIAT LASGLEVGKT PIAIEIEHFI QLITGVAVFL ENSTTRP00000007871/1-1012 TARGVVVATG DRTVMGRIAT LASGLEVGKT PIAIEIEHFI QLITGVAVFL ENSBTAP00000024797/1-1033 TARGVVVATG DRTVMGRIAT LASGLEVGKT PIAIEIEHFI QLITGVAVFL bmy_17415T0/1-973 TARGVVVATG DRTVMGRIAT LASGLEVGKT PIAIEIEHFI QLITGVAVFL BACU018236/1-1032 TARGVVVATG DRTVMGRIAT LASGLEVGKT PIAIEIEHFI QLITGVAVFL 351 400 ENSP00000444688/1-1026 GVSFFILSLI LGYTWLEAVI FLIGIIVANV PEGLLATVTV CLTLTAKRMA ENSTTRP00000007871/1-1012 GVSFFILSLI LGYTWLEAVI FLIGIIVANV PEGLLATVTV CLTLTAKRMA ENSBTAP00000024797/1-1033 GVSFFILSLI LGYTWLEAVI FLIGIIVANV PEGLLATVTV CLTLTAKRMA bmy_17415T0/1-973 GVSFFILSLI LGYTWLEAVI FLIGIIVANV PEGLLATVTV CLTLTAKRMA BACU018236/1-1032 GVSFFILSLI LGYTWLEAVI FLIGIIVANV PEGLLATVTV CLTLTAKRMA 401 450 ENSP00000444688/1-1026 RKNCLVKNLE AVETLGSTST ICSDKTGTLT QNRMTVAHMW FDNQIHEADT ENSTTRP00000007871/1-1012 RKNCLVKNLE AVETLGSTST ICSDKTGTLT QNRMTVAHMW FDNQIHEADT ENSBTAP00000024797/1-1033 RKNCLVKNLE AVETLGSTST ICSDKTGTLT QNRMTVAHMW FDNQIHEADT bmy_17415T0/1-973 RKNCLVKNLE AVETLGSTST ICSDKTGTLT QNRMTVAHMW FDNQIHEADT BACU018236/1-1032 RKNCLVKNLE AVETLGSTST ICSDKTGTLT QNRMTVAHMW FDNQIHEADT 451 500 ENSP00000444688/1-1026 TEDQSGTSFD KSSHTWVALS HIAGLCNRAV FKGGQDNIPV LKRDVAGDAS ENSTTRP00000007871/1-1012 TEDQSGTSFD KSSHTWVALS HIAGLCNRAV FKGGQDNIPV LKRDVAGDAS ENSBTAP00000024797/1-1033 TEDQSGTSFD KSSHTWVALS HIAGLCNRAV FKGGQDNVPV LKRDVAGDAS bmy_17415T0/1-973 TEDQSGTSFD KSSHTWVALS HIAGLCNRAV FKGGQDNIPV LKRDVAGDAS BACU018236/1-1032 TEDQSGTSFD KSSHTWVALS HIAGLCNRAV FKGGQDNIPV LKRDVAGDAS 501 550 ENSP00000444688/1-1026 ESALLKCIEL SSGSVKLMRE RNKKVAEIPF NSTNKYQLSI HETEDPNDNR ENSTTRP00000007871/1-1012 ESALLKCIEL SSGSVKLMRE RNKKVAEIPF NSTNKYQLSI HETEDPNDNR ENSBTAP00000024797/1-1033 ESALLKCIEL SSGSVKLMRE RNKKVAEIPF NSTNKYQLSI HETEDPNDNR bmy_17415T0/1-973 ESALLKCIEL SSGSVKLMRE RNKKVAEIPF NSTNKYQLSI HETEDPNDNR BACU018236/1-1032 ESALLKCIEL SSGSVKLMRE RNKKVAEIPF NSTNKYQLSI HETEDPNDNR 551 600 ENSP00000444688/1-1026 YLLVMKGAPE RILDRCSTIL LQGKEQPLDE EMKEAFQNAY LELGGLGERV ENSTTRP00000007871/1-1012 YLLVMKGAPE RILDRCATIL LQGKEQPLDE EMKEAFQNAY LELGGLGERV ENSBTAP00000024797/1-1033 YLLVMKGAPE RILDRCSTIL LHGKEQPLDE EMKEAFQNAY LELGGLGERV bmy_17415T0/1-973 YLLVMKGAPE RILDRCSTIL LQGKEQPLDE EMKEAFQNAY LELGGLGERV BACU018236/1-1032 YLLVMKGAPE RILDRCSTIL LQGKEQPLDE EMKEAFQNAY LELGGLGERV 601 650 ENSP00000444688/1-1026 LGFCHYYLPE EQFPKGFAFD CDDVNFTTDN LCFVGLMSMI DPPRAAVPDA ENSTTRP00000007871/1-1012 LGFCHYYLPE EQFPKGFAFD CDDVNFTTDN LCFVGLMSMI DPPRAAVPDA ENSBTAP00000024797/1-1033 LGFCHYYLPE EQFPKGFAFD CDDVNFTTDN LCFVGLMSMI DPPRAAVPDA bmy_17415T0/1-973 LGFCHYYLPE EQFPKGFAFD CDDVNFTTDN LCFVGLMSMI DPPRAAVPDA BACU018236/1-1032 LGFCHYYLPE EQFPKGFAFD CDDVNFTTDN LCFVGLMSMI DPPRAAVPDA 651 700 ENSP00000444688/1-1026 VGKCRSAGIK VIMVTGDHPI TAKAIAKGVG IISEGNETVE DIAARLNIPV ENSTTRP00000007871/1-1012 VGKCRSAGIK VIMVTGDHPI TAKAIAKGVG IISEGNETVE DIAARLNIPV ENSBTAP00000024797/1-1033 VGKCRSAGIK VIMVTGDHPI TAKAIAKGVG IISEGNETVE DIAARLNIPV bmy_17415T0/1-973 VGKCRSAGIK VIMVTGDHPI TAKAIAKGVG IISEGNETVE DIAARLNIPV BACU018236/1-1032 VGKCRSAGIK VIMVTGDHPI TAKAIAKGVG IISEGNETVE DIAARLNIPV 701 750 ENSP00000444688/1-1026 SQVNPRDAKA CVIHGTDLKD FTSEQIDEIL QNHTEIVFAR TSPQQKLIIV ENSTTRP00000007871/1-1012 SQVNPRDAKA CVIHGTDLKD FTSEQIDEIL QNHTEIVFAR TSPQQKLIIV ENSBTAP00000024797/1-1033 SQVNPRDAKA CVIHGTDLKD FTSEQIDEIL QNHTEIVFAR TSPQQKLIIV bmy_17415T0/1-973 SQVNPRDAKA CVIHGTDLKD FTSEQIDEIL QNHTEIVFAR TSPQQKLIIV BACU018236/1-1032 SQVNPRDAKA CVIHGTDLKD FTSEQIDEIL QNHTEIVFAR TSPQQKLIIV 751 800 ENSP00000444688/1-1026 EGCQRQGAIV AVTGDGVNDS PALKKADIGV AMGIAGSDVS KQAADMILLD ENSTTRP00000007871/1-1012 EGCQRQGAIV AVTGDGVNDS PALKKADIGV AMGIAGSDVS KQAADMILLD ENSBTAP00000024797/1-1033 EGCQRQGAIV AVTGDGVNDS PALKKADIGV AMGIAGSDVS KQAADMILLD bmy_17415T0/1-973 EGCQRQGAIV AVTGDGVNDS PALKKADIGV AMGIAGSDVS KQAADMILLD BACU018236/1-1032 EGCQRQGAIV AVTGDGVNDS PALKKADIGV AMGIAGSDVS KQAADMILLD 801 850 ENSP00000444688/1-1026 DNFASIVTGV EEGRLIFDNL KKSIAYTLTS NIPEITPFLL FIMANIPLPL ENSTTRP00000007871/1-1012 DNFASIVTGV EEGRLIFDNL KKSIAYTLTS NIPEITPFLL FIMANIPLPL ENSBTAP00000024797/1-1033 DNFASIVTGV EEGRLIFDNL KKSIAYTLTS NIPEITPFLL FIMANIPLPL bmy_17415T0/1-973 DNFASIVTGV EEGRLIFDNL KKSIAYTLTS NIPEITPFLL FIMANIPLPL BACU018236/1-1032 DNFASIVTGV EEGRLIFDNL KKSIAYTLTS NIPEITPFLL FIMANIPLPL 851 900 ENSP00000444688/1-1026 GTITILCIDL GTDMVPAISL AYEAAESDIM KRQPRNPRTD KLVNERLISM ENSTTRP00000007871/1-1012 GTITILCIDL GTDMVPAISL AYEAAESDIM KRQPRNPRTD KLVNERLISM ENSBTAP00000024797/1-1033 GTITILCIDL GTDMVPAISL AYEAAESDIM KRQPRNPRTD KLVNERLISM bmy_17415T0/1-973 GTITILCIDL GTDM------ ---------- ---------- ---------- BACU018236/1-1032 GTITILCIDL GTDMVPAISL AYEAAESDIM KRQPRNPRTD KLVNERLISM 901 950 ENSP00000444688/1-1026 AYGQIGMIQA LGGFFSYFVI LAENGFLPGN LVGIRLNWDD RTVNDLEDSY ENSTTRP00000007871/1-1012 AYGQIGMIQA LGGFFSYFVI LAENGFLPGN LVGIRLNWDD RTVNDLEDSY ENSBTAP00000024797/1-1033 AYGQIGMIQA LGGFFSYFVI LAENGFLPGN LVGIRLNWDD RTVNDLEDSY bmy_17415T0/1-973 ---------A LGGFFSYFVI LAENGFLPGN LVGIRLNWDD RTVNDLEDSY BACU018236/1-1032 AYGQIGMIQA LGGFFSYFVI LAENGFLPGN LVGIRLNWDD RTVNDLEDSY 951 1000 ENSP00000444688/1-1026 GQQWTYEQRK VVEFTCHTAF FVSIVVVQWA DLIICKTRRN SVFQQGMKNK ENSTTRP00000007871/1-1012 GQQWTYEQRK VVEFTCHTAF FVSIVVVQWA DLIICKTRRN SVFQQGMKNK ENSBTAP00000024797/1-1033 GQQWTYEQRK VVEFTCHTAF FVSIVVVQWA DLIICKTRRN SVFQQGMKNK bmy_17415T0/1-973 GQQWTYEQRK VVEFTCHTAF FVSIVVVQWA DLIICKTRRN SVFQQGMKNK BACU018236/1-1032 GQQWTYEQRK VVEFTCHTAF FVSIVVVQWA DLIICKTRRN SVFQQGMKNK 1001 1050 ENSP00000444688/1-1026 ILIFGLFEET ALAAFLSYCP GMDVALRMYP LK--PSWWFC AFPYSFLIFV ENSTTRP00000007871/1-1012 ILIFGLFEET ALAAFLSYCP GMDVALRMYP LKASG---VC AFPYSLIXXX ENSBTAP00000024797/1-1033 ILIFGLFEET ALAAFLSYCP GMDVALRMYP LNGTPSW-VG VSLPLCLCLC bmy_17415T0/1-973 ILIFGLFEET ALAAFLSYCP GMDVALRMYP LK-------- ---------- BACU018236/1-1032 ILIFGLFEET ALAAFLSYCP GMDVALRMYP LNLCPFWFLS VPLSVCLCLC 1051 1100 ENSP00000444688/1-1026 YDEIR----K LILRRNPGGW VEKETYY ENSTTRP00000007871/1-1012 XXXXX----- XXXXXXXXXX XXXXXXY ENSBTAP00000024797/1-1033 VSPCRSLPSL SLSSFVSPGW VEKETYY bmy_17415T0/1-973 ---------- ---------- ------- BACU018236/1-1032 FSPCR--LPL FLSSFVSPGW VEKETYY