KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:06 2014 Check: 00 .. Name: ENSTTRP00000007480/1-297 Len: 442 Check: 6911 Weight: 1.00 Name: ENSP00000377801/1-376 Len: 442 Check: 8489 Weight: 1.00 Name: ENSBTAP00000024803/1-377 Len: 442 Check: 2280 Weight: 1.00 Name: bmy_10338T0/1-359 Len: 442 Check: 5165 Weight: 1.00 Name: BACU016074/1-236 Len: 442 Check: 5605 Weight: 1.00 // 1 50 ENSTTRP00000007480/1-297 ---------- ---------- ---------- ---------- ---------- ENSP00000377801/1-376 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024803/1-377 ---------- ---------- ---------- ---------- ---------- bmy_10338T0/1-359 AHLLPLWLGG WHFPHFTGEA ASVYRKGSSG RISSSSSLNP PSRRPPQPGR BACU016074/1-236 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007480/1-297 --------MA EERRGAWFGF GFCGFGQALG SGRGRQVHSP EPLRAPGAGL ENSP00000377801/1-376 --------MA EERPGAWFGF GFCGFGQELG SGRGRQVHSP SPLRA---GV ENSBTAP00000024803/1-377 --------MD EERRGTWFGF GFCGFGQALG SGLGRQVHSP EPLRTPGGSL bmy_10338T0/1-359 SQQRALPGMA EERRGAWFGF GFCGFGQALG SGRGRQVHSP EPLRAPGAGL BACU016074/1-236 --------MA EERRGAWFGF GFCGFGQALG SGGGRQVHSP EPLRAPGG-- 101 150 ENSTTRP00000007480/1-297 DVCRVSASWS YTAFVTXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000377801/1-376 DICRVSASWS YTAFVTR-GG RLELSGSASG AAGRCKDAWA SEGLLAVLRA ENSBTAP00000024803/1-377 GVCRVSASWS YTAFVTR-GG RVQLSGAAGG TADGCTDAWA SEELLVLLRA bmy_10338T0/1-359 DVCRVSASWS YTAFVTRGGG QVELSGFAVG AVGGCRDAWA SEELLVVLRA BACU016074/1-236 ---------- --------GG QVELSGFAVG AVGGCRDAWA SEELLVVLRA 151 200 ENSTTRP00000007480/1-297 XXXXX---XX XXXXXXSALR GEPLWAQ-TV PEADLCEDGP VGDETQAGPL ENSP00000377801/1-376 GPGPEA--LL QVWAAESALR GEPLWAQNVV PEAE-GEDDP AG-EAQAGRL ENSBTAP00000024803/1-377 GPGAGA--EL QAWAPGSAMR GDPLWSQ-AV QEAE---HGP SRDETQAGLL bmy_10338T0/1-359 GPGPGAGMEL QAWAPGSALR GEPLWAQ-TV PEAE-REDGP GGDETQAGPL BACU016074/1-236 GPGPGAGTEL QAWAPE---- ---------- ---------- ---------- 201 250 ENSTTRP00000007480/1-297 PLLPCARAYV SPRPPFYRPL APTLRARRLE LGAEHALLLD AAGQVFSWGG ENSP00000377801/1-376 PLLPCARAYV SPRAPFYRPL APELRARQLE LGAEHALLLD AAGQVFSWGG ENSBTAP00000024803/1-377 PLLPCARAYV SPRPPFYRPL APTLRARRLE LGAEHALLLD AAGQVFSWGA bmy_10338T0/1-359 PLLPCARAYV SPRPPFYRPL APTLRARRLE LGAEHALLLD AAGQVFSWGA BACU016074/1-236 ---------- ---------- ---------- ---------- -AGDIYIWGW 251 300 ENSTTRP00000007480/1-297 GRHGQLGHGT LEAEPEPRLL QALQGLTMAE VAAGGWHSLC VS-------- ENSP00000377801/1-376 GRHGQLGHGT LEAELEPRLL EALQGLVMAE VAAGGWHSVC VSETGDIYIW ENSBTAP00000024803/1-377 GRHGQLGHGT LEAEPEPRLL EALQGLRMAE VAAGGWHSVC LSETGDIYIW bmy_10338T0/1-359 GRHGQLGHGT LEAEPEPRLL QALQGLTMAE VAAGGWHSLC VS-------- BACU016074/1-236 NESGQL---- --ALPTKSLA E--DGKTTSE ---------- ---------- 301 350 ENSTTRP00000007480/1-297 ---------- ---------- -----ASGLN EDGSEVKTVA GGEDGAPAPF ENSP00000377801/1-376 GWNESGQLAL PTRNLAEDGE TVAREATELN EDGSQVKRTG GAEDGAPAPF ENSBTAP00000024803/1-377 GWNESGQLAL PTKSLAEDGK TTAGEASGLE EDGSEVKRGS AGEDGAPAPF bmy_10338T0/1-359 ---------- ---------- -----ASGLN EDGSEVKRVA GGEDGAPTPF BACU016074/1-236 ---------- ---------- -----ASGLN EDGSEVKRVA GGEDGAPTPF 351 400 ENSTTRP00000007480/1-297 IAVQPFPALL DLPLGSDAVK ASCGSRHTAV VTRTGDLYTW GW-------- ENSP00000377801/1-376 IAVQPFPALL DLPMGSDAVK ASCGSRHTAV VTRTGELYTW GWGKYGQLGH ENSBTAP00000024803/1-377 IAVQPFPALL DLSPGSEAVK VSCGSRHTAV LTRTGELYTW GWGKYGQLGH bmy_10338T0/1-359 IAVQPFPALL DLPLGSDAVK ASCGSRHTAV VTRTGELYTW GWGK------ BACU016074/1-236 IAVQPFPALL DLPLGSDAVK ASCGSRHTAV VTRTGELYTW GWGKYGQLGH 401 450 ENSTTRP00000007480/1-297 ---------- ---------- ---------- ---------- -- ENSP00000377801/1-376 EDTTSLDRPR RVEYFVDKQL QVKAVTCGPW NTYVYAVEKG KS ENSBTAP00000024803/1-377 KDTTTLDRPC RVEYFVDKQL QVRTVSCGPW NTYVYAVEKE KS bmy_10338T0/1-359 ---------- ---------- ---------- ---------- -- BACU016074/1-236 KDTTSLDRPC RVKYFVDKQL QVRTVSCGPW NTYVYAVEKE KS