KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:24:07 2014 Check: 00 .. Name: ENSP00000377793/1-620 Len: 620 Check: 4958 Weight: 1.00 Name: ENSBTAP00000024808/1-605 Len: 620 Check: 9517 Weight: 1.00 Name: bmy_10337T0/1-609 Len: 620 Check: 5108 Weight: 1.00 Name: ENSTTRP00000004790/1-616 Len: 620 Check: 3412 Weight: 1.00 // 1 50 ENSP00000377793/1-620 MRRSEVLAEE SIVCLQKALN HLREIWELIG IPEDQRLQRT EVVKKHIKEL ENSBTAP00000024808/1-605 MRRSEVLAEE SIVCLQKALN HLREIWELIG IPEDQRLQRT EVVKKHIKDL bmy_10337T0/1-609 ----EVLAEE SIVCLQKALN HLREIWELIG IPEDQRLQRT EVVKKHIKDL ENSTTRP00000004790/1-616 ----EVLAEE SIVCLQKALN HLREIWELIG IPEDQRLQRT EVVKKHIKDL 51 100 ENSP00000377793/1-620 LDMMIAEEES LKERLIKSIS VCQKELNTLC SELHVEPFQE EGETTILQLE ENSBTAP00000024808/1-605 LDMMIAEEES LKERLIKSIA VCQKELNTLC SELNVEPFHE EGETTILQLE bmy_10337T0/1-609 LDMMIAEEES LKERLIKSIA ICQKELNTLC SELHVEPFQE EGETTILQLE ENSTTRP00000004790/1-616 LDMMIAEEES LKERLIKSIA ICQKELNTLC SELHVEPFQE EGETTILQLE 101 150 ENSP00000377793/1-620 KDLRTQVELM RKQKKERKQE LKLLQEQDQE LCEILCMPHY DIDSASVPSL ENSBTAP00000024808/1-605 KDLRTQVELR RKQKKERKQE LKILQEQDQE LCEILCMPHY EIDSTSVPSL bmy_10337T0/1-609 KDLRTQVELM RKQKKERKQD LKLLQEQDQE LCEILCTPHY DIDSTSVPSL ENSTTRP00000004790/1-616 KDLRTQVELM RKQKKERKQE LKLLQEQDQE LCEILCTPHY DIDSTSVPSL 151 200 ENSP00000377793/1-620 EELNQFRQHV TTLRETKASR REEFVSIKRQ IILCMEALDH TPDTSFERDV ENSBTAP00000024808/1-605 EELNQFRQHV ATLRETKASR REEFVNIKRQ IILCMEELEH TPDTSFERDV bmy_10337T0/1-609 EELSQFRQHV ATLRETKASR REEFVNIKRQ IILCMEELEH TPDTSFERDV ENSTTRP00000004790/1-616 EELSQFRQHV ATLRETKASR HEEFVRIKRQ IILCMEELEH TPDTSFERDV 201 250 ENSP00000377793/1-620 VCEDEDAFCL SLENIATLQK LLRQLEMQKS QNEAVCEGLR TQIRELWDRL ENSBTAP00000024808/1-605 VCEDEEAFCL SLENIATLQK LLRQLEVRKS QNEAVCEGLR AQIRELWDRL bmy_10337T0/1-609 VCEDEDAFCL SLENIATLQK LLRQLEMRKS QNEAVCEGLR AQIRELWDRL ENSTTRP00000004790/1-616 VCEDEDAFCL SLENIATLQK LLQQLEMRKS QNEAVCEGLR AQIRELWDRL 251 300 ENSP00000377793/1-620 QIPEEEREAV ATIMSGSKAK VRKALQLEVD RLEELKMQNM KKVIEAIRVE ENSBTAP00000024808/1-605 QIPAEEREAV ATVMTGSKAK VRKALQLEVD RLEELKMQNM KKVIEAIRVE bmy_10337T0/1-609 QIPAEEREAV ATVMTGSKAK VRKALQLEVD RLEELKMQNM KKVIEAIRVE ENSTTRP00000004790/1-616 QIPAEEREAV ATVMTGSKAK VRKALQLEVD RLEELKMQNM KKVIEAIRVE 301 350 ENSP00000377793/1-620 LVQYWDQCFY SQEQRQAFAP FCAEDYTESL LQLHDAEIVR LKNYYEVHKE ENSBTAP00000024808/1-605 VAQYWDRCFY SQEQRQAFAA YYSEDYTENL LQLHDAEIVR LRNYYEVHKE bmy_10337T0/1-609 LAQYWDQCFY SQEQRQAFAP YYSEDYTENL LQLHDAEILR LRNYYEVHKE ENSTTRP00000004790/1-616 LAQYWDQCFY SQEQRQAFAP YYSEDYTENL LQLHDAEIVQ LRNYYEVHKE 351 400 ENSP00000377793/1-620 LFEGVQKWEE TWRLFLEFER KASDPNRFTN RGGNLLKEEK QRAKLQKMLP ENSBTAP00000024808/1-605 LFEGVQKWEE SWRLFLEFER KASDPSRFTN RGGNLLKEEK QRAKLQKTLP bmy_10337T0/1-609 LFEGVQKWEE SWKLFLEFER KASDPSRFTN RGGNLLKEEK QRAKLQKTLP ENSTTRP00000004790/1-616 LFEGVQKWEE SWKLFLEFER KASDPSRFTN RGGNLLKEEK QRAKLQKTLP 401 450 ENSP00000377793/1-620 KLEEELKARI ELWEQEHSKA FMVNGQKFME YVAEQWEMHR LEKERAKQER ENSBTAP00000024808/1-605 KLEEELKARI EMWEREHSKA FVVNGQKFME YVTEQWEMHQ LEKERAKQER bmy_10337T0/1-609 KLEEELKARI EMWEQEHSKA FVVNGQKFME YVTEQWEMHR LEKERAKQER ENSTTRP00000004790/1-616 KLEEELKARI EMWEQEHSKA FVVNGQKFME YVTEQWEMHR LEKERAKQER 451 500 ENSP00000377793/1-620 QLKNKKQTET EMLYGSAPRT PSKRRGLAPN TPGKARKLNT TTMSNATANS ENSBTAP00000024808/1-605 GSRLAKEVAA HPFLCSHPRA VF-RLGFITL APDFVRMLNT TTMSNATANS bmy_10337T0/1-609 QLKNKKQTET EMLYGSTPRT PNKRRGLAPG TPGKVRKLNT TTVSNATANS ENSTTRP00000004790/1-616 QLKNKKQTET EMLYGSTPRT PNKRRGLTPG TPGKVRKLNT TTVSNATANS 501 550 ENSP00000377793/1-620 SIRPIFGGTV YHSPVSRLPP SGSKPVAAST CSGKKTPRTG RHGANKENLE ENSBTAP00000024808/1-605 SIRPVFSGTV YRSPVSRLPP SGSKPVITST CSGKKTPRAV KHGANKENLE bmy_10337T0/1-609 SIRPVFSGTV CRSPVSRLPP SGSKPVTTST CSGKKTPRGI KHGANKENLE ENSTTRP00000004790/1-616 SIRPVFSGTV CRSPVSRLPP SGSKPVTTST CSGKKTPRGL KRGANKENLE 551 600 ENSP00000377793/1-620 LNGSILSGGY PGSAPLQRNF SINSVASTYS EFAKDPSLSD SSTVGLQREL ENSBTAP00000024808/1-605 LNGSILSGGY PDSAPPRRNF SINSVASTYS EFARE----- ---------L bmy_10337T0/1-609 LNGSIFSGGY PASAPPRRNF SINSVASTYS EFAKDPSLSD SSTVG----L ENSTTRP00000004790/1-616 LNGSILSGGY PASAPPRRNF SINSVASTYS EFAXXXXXXX XXXXXXXREL 601 650 ENSP00000377793/1-620 SKASKSDATS GILNSTNIQS ENSBTAP00000024808/1-605 SKASKSDAAS RILNSTNIQS bmy_10337T0/1-609 QEAGIPNTDF R--NNKYLA- ENSTTRP00000004790/1-616 SKASKSDATS RILNSTNIQS