KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:24:08 2014 Check: 00 .. Name: ENSBTAP00000024815/1-496 Len: 548 Check: 6225 Weight: 1.00 Name: ENSTTRP00000001926/1-502 Len: 548 Check: 2309 Weight: 1.00 Name: bmy_19808T0/1-389 Len: 548 Check: 8019 Weight: 1.00 Name: BACU017149/1-492 Len: 548 Check: 107 Weight: 1.00 // 1 50 ENSBTAP00000024815/1-496 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001926/1-502 ---------- ---------- ---------- ---------- -----MEDEH bmy_19808T0/1-389 MRRRMQGLAV VTSDLNPLPV CGDGPQARPR KESVAFHLQS CRKGGMEDEH BACU017149/1-492 ---------- ---------- ---------- ---------- -----MEDEH 51 100 ENSBTAP00000024815/1-496 --MRALRRLA QGRVLLLTIC AAGIGGTFQF GYNLSIINAP TLYVQEFTNE ENSTTRP00000001926/1-502 EPPLQPRTQF QGRVLLLIIC AAGIGGTFQF GYNLSIINAP TSYIQEFTNE bmy_19808T0/1-389 EPPLQPRTQF QGRVLLLTIC AAGIGGTFQF GYNLSIINAP TSHIQEFTNE BACU017149/1-492 EPSLQPRTQF QGRVLLLTIC AAGIGGTFQF GYNLSIINAP TSHIQEFTNE 101 150 ENSBTAP00000024815/1-496 TWRTRTGQPM PDHLVLLVWS LIVSLYPLGG LLGALLAGPL AVTLGRKKSL ENSTTRP00000001926/1-502 TWRMRTDWPL PDHLVLLVWS LIVSLYPVGG LLGALLAGPL AITLGRKKSL bmy_19808T0/1-389 TWRMRTGRPL PDQLVPLLWS LIVSLYPVGG LLGALLAGPL AITLGRKKSL BACU017149/1-492 TWRMRTSRPL PDQLVPLLWS LIVSLYPVGG LLGALLAGPM AITLGRKKSL 151 200 ENSBTAP00000024815/1-496 LVNNVFVLAA AALFGFSRRA GSFEMIMLGR LLVGISAGVG MNIQPMYLGE ENSTTRP00000001926/1-502 LVNNIFVVAA ATLFGFSRRA GSFEMIMLGR LLVGVSAGVS MNVQPMYLGE bmy_19808T0/1-389 LVNNIFVVAA ATLFGFSRRA GSFEMIMLGR LLVGVSAGVS MNVQPMYLGE BACU017149/1-492 LVNNIFVVAA ATLFGFSRRA GSFEMIMLGR LLVGVSAGVS MNVQPMYLGE 201 250 ENSBTAP00000024815/1-496 SAPKELRGAV AMTSAIFTAL GLVMGQVVGL RELLGGPQAW PLLLASCLVP ENSTTRP00000001926/1-502 STPKELRGAV AMTSAIFAAL GVVMGQVVGL RELLGGPQAW PLLLASCLVP bmy_19808T0/1-389 SAPKELRGAV AMTSAIFTAL GIVMGQVVGL RELLGGPQAW PLLLASCLVP BACU017149/1-492 SAPKELRGAV AMTSAIFTAL GIVMGQVVGL RELLGGPQAW PLLLASCLVP 251 300 ENSBTAP00000024815/1-496 GVLQLASLPL LPESPRYLLI DCGDPAACRA ALQRLRGPAD LAGELAELEQ ENSTTRP00000001926/1-502 GVLQLASLPL LPESPRYLLI DCGDSEACLA ALQRLRGPAD LAEELAELER bmy_19808T0/1-389 GVLQLASLPL LPESPRYLLI DCGDSEACLA ---------- ---------- BACU017149/1-492 GVLQLASLPL LPESPRYLLI DCGDSEACLA ALLRLRGPAD LAGELAELER 301 350 ENSBTAP00000024815/1-496 ERAVCRGGRA RRPWELFRER ALRRQVASLV VLGGAMELCG NDAIYAYASA ENSTTRP00000001926/1-502 ERAACQGRXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_19808T0/1-389 ---------- ---------- ---------- ---------- ---------- BACU017149/1-492 ERAACQGRRA RRPWELFRDR ALRRQVASLV VLGGVMELCG NDA------- 351 400 ENSBTAP00000024815/1-496 VFSQAGIPQD KIQYAAIGTG GCELLATLLS CLVIERAGRR VLLTGGYGLM ENSTTRP00000001926/1-502 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX CVVIERVGRR MLLMVGYGLM bmy_19808T0/1-389 ---------- ---------- ---------- ---------- ---------- BACU017149/1-492 ----ARIPPE KVQYASIGTG GCELLAALLS CVVIERVGRR MLLMGGYGLM 401 450 ENSBTAP00000024815/1-496 TCWGSVFTVA LCLQGSFSWM AYLAMACIFA FILSFGIGPA GVTGILATEL ENSTTRP00000001926/1-502 TCWGSVFTAA LCLQSSLPWM PYLAMSCVFA FILSFGIGPA GVTGILATEL bmy_19808T0/1-389 ---------- ---------- ---------- ---------A GVTGILATEL BACU017149/1-492 TCWGRGFTAA LCLQSSLPWM PYLAMSCVFA FILSFGIGPA GVTRILATEL 451 500 ENSBTAP00000024815/1-496 FDQMARPAAY MVCGALMWTM LFLVGLVFPF IMEGLSHFIY VPFLCVCVCA ENSTTRP00000001926/1-502 FDQMARPAAY MVCGMLMWTM LFLVGLGFPF IVEGLSHFLY VPFLCVCVCG bmy_19808T0/1-389 FDQMARPAAY MVCGALMWTM LFLVGLGFPF IMEGLSHFLY VPFLCVCVCG BACU017149/1-492 FDQMTRPAAY MVCGALMWTM LFLVGLGFPF IMEGLSHFLY VPFLCVCVCG 501 550 ENSBTAP00000024815/1-496 AVYSGIFLPE TRGKSFMEIS EELHRLNFPG RSRGPAWAGP EVVRSTEL ENSTTRP00000001926/1-502 AVYTGFFLPE TRGKSFMDIS EELHRLNFPG WSQGPAWTG- EVIRSTEL bmy_19808T0/1-389 AVYTGFFLPE TRGKSFMDIS EELHRLNFPG VEPGPHVDGP EVIRSTEL BACU017149/1-492 AVYTGFFLPE TRGKSFVDIS EELHRLNFPG VEPGPHVDGP EVIRSTEL