KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:09 2014 Check: 00 .. Name: ENSTTRP00000010701/1-548 Len: 618 Check: 7607 Weight: 1.00 Name: bmy_19176T0/1-613 Len: 618 Check: 420 Weight: 1.00 Name: ENSP00000312625/1-553 Len: 618 Check: 7429 Weight: 1.00 Name: ENSBTAP00000024825/1-555 Len: 618 Check: 9567 Weight: 1.00 Name: BACU005744/1-414 Len: 618 Check: 6130 Weight: 1.00 // 1 50 ENSTTRP00000010701/1-548 MATDTSQGEL VHPKALPLIV GAQLIHADKL GEKVEDNTMP IRRAVNSTRE bmy_19176T0/1-613 MATDTSQGEL VHPKALPLIV GAQLIHADKL GEKVEDNTMP IRRAVNSTRE ENSP00000312625/1-553 MATDTSQGEL VHPKALPLIV GAQLIHADKL GEKVEDSTMP IRRTVNSTRE ENSBTAP00000024825/1-555 MATDTSQGEL VHPKALPLIV GAQLIHADKL GEKVEDNTMP IRRAVNSTRE BACU005744/1-414 MATDTSQGEL VHPKALPLIV GAQLIHADKL GE-------- ---------- 51 100 ENSTTRP00000010701/1-548 TPPKSKLAEG EEEKPEPDVS SEESVSTVEE QENETPPATS SETEQPKGQP bmy_19176T0/1-613 TPPKSKLAEG EEEKPEPDVS SEESVSTVEE QENETPPATS SETEQPKGQP ENSP00000312625/1-553 TPPKSKLAEG EEEKPEPDIS SEESVSTVEE QENETPPATS SEAEQPKGEP ENSBTAP00000024825/1-555 TPPKSKLAEG VEEKPEPDVS SEESISTVEE QENETPPATS SETEQPKGQP BACU005744/1-414 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000010701/1-548 ENEEKEENKP SEETKKDEKD QSKEKEKKVK KTIPSWATLS ASQLARAQKQ bmy_19176T0/1-613 ENEEKEENKP SEETKKDEKD QSKEKEKKVK KTIPSWATLS ASQLARAQKQ ENSP00000312625/1-553 ENEEKEENKS SEETKKDEKD QSKEKEKKVK KTIPSWATLS ASQLARAQKQ ENSBTAP00000024825/1-555 ENEEKEENKP SEETKKDEKD QSKEKEKKVK KTIPSWATLS ASQLARAQKQ BACU005744/1-414 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000010701/1-548 TPMASSPRPK MDAILTEAIK ---------- ---------- ---------- bmy_19176T0/1-613 TPMASSPRPK MDAILTEAIK ASFYFKQFIL DLFCLSLAYL KMAYSCADIR ENSP00000312625/1-553 TPMASSPRPK MDAILTEAIK ---------- ---------- ---------- ENSBTAP00000024825/1-555 TPMASSPRPK MDAILTEAIK ---------- ---------- ---------- BACU005744/1-414 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000010701/1-548 ---------- ---------- ---------- ---ACFQKSG ASVVAIRKYI bmy_19176T0/1-613 NLALLPKRDL NRRKPLLSSC FYNIITFDQE KTSACFQKSG ASVVAIRKYI ENSP00000312625/1-553 ---------- ---------- ---------- ---ACFQKSG ASVVAIRKYI ENSBTAP00000024825/1-555 ---------- ---------- ---------- ---ACFQKSG ASVVAIRKYI BACU005744/1-414 ---------- ---------- ---------- ----CFQKSG ASVVAIRKYI 251 300 ENSTTRP00000010701/1-548 IHKYPSLELE RRGYLLKQAL KRELNRGVIK QVKGKGASGS FIVVQKSRKT bmy_19176T0/1-613 IHKYPSLELE RRGYLLKQAL KRELNRGVIK QVKGKGASGS FIVVQKSRKT ENSP00000312625/1-553 IHKYPSLELE RRGYLLKQAL KRELNRGVIK QVKGKGASGS FVVVQKSRKT ENSBTAP00000024825/1-555 IHKYPSLELE RRGYLLKQAL KRELNRGVIK QVKGKGASGS FVVVQKSRKP BACU005744/1-414 IHKYPSLELE RRGYLLKQAL KRELNRGVIK QVKGKGASGS FIVVQKSRKA 301 350 ENSTTRP00000010701/1-548 PQKSRNRKXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_19176T0/1-613 PQKSRNRKNR SSAVDPEPQV KLEDILPLAF TRLCEPKEAS YSLIRKYVSQ ENSP00000312625/1-553 PQKSRNRKNR SSAVDPEPQV KLEDVLPLAF TRLCEPKEAS YSLIRKYVSQ ENSBTAP00000024825/1-555 PQKSRNRKNR SSAVDPEPQV KLEDILPLAF TRLCEPKEAS YSLIRKYVSQ BACU005744/1-414 PQKSRNRKNR SSAVDPEPQV KLEDILPLAF TRLCEPKEAS YSLIRKYVSQ 351 400 ENSTTRP00000010701/1-548 XXXXXXXXXX PQLLKNALQR AVERGQLEQI TGKGASGTFQ LKKSGEKPLL bmy_19176T0/1-613 YYPKLRVDIS LMVKKRLLEC P---GKLEFG SVWFMVLYVQ LKKSGEKPLL ENSP00000312625/1-553 YYPKLRVDIR PQLLKNALQR AVERGQLEQI TGKGASGTFQ LKKSGEKPLL ENSBTAP00000024825/1-555 YYPKLRVDIR PQLLKNALQR AVERGQLEQI TGKGASGTFQ LKKSGEKPLL BACU005744/1-414 YYPKLRVDIR PQLLKNALQR AVERGQLEQI TGKGASGTFQ LKKSGEKPLL 401 450 ENSTTRP00000010701/1-548 GGSLMEYAIL SAIAAMNEPK TCSTTALKKY VLENHPGTN- ----HLLKKT bmy_19176T0/1-613 GGSLMEYAIL SAIAAMNEPK TCSTTALKKY VLENHPGTNS NYQMHLLKKT ENSP00000312625/1-553 GGSLMEYAIL SAIAAMNEPK TCSTTALKKY VLENHPGTNS NYQMHLLKKT ENSBTAP00000024825/1-555 GGSLMEYAIL SAIAAMNEPK TCSTTALKKY VLENHPGTNS NYQMHLLKKT BACU005744/1-414 GGSLMEYAIL SAIAAMNEPK TCSTTALKKY VLENHPGTNS NYQMHLLKKT 451 500 ENSTTRP00000010701/1-548 LQRCEKNGWM EQISGKGFSG TFQLCFPYYP SPGVLFPKKE PDDSKDEDED bmy_19176T0/1-613 LQRCEKNGWM EQISGKGFSG TFQLCFPYYP SPGVLFPKKE PDDSKDEDED ENSP00000312625/1-553 LQKCEKNGWM EQISGKGFSG TFQLCFPYYP SPGVLFPKKE PDDSRDEDED ENSBTAP00000024825/1-555 LQRCEKNGWM EQISGKGFSG TFQLCFPYYP SPGVLFPKKE PDDSKDEDED BACU005744/1-414 LQRCEKNGWM EQISGKGFSG TFQLCFPYYP SPGVLFPKKE PDDSKDEDED 501 550 ENSTTRP00000010701/1-548 EDE--SSEED SEDEEPPPKR RLQKKTPAKS PGKAASMKQR GSKPAPKVPA bmy_19176T0/1-613 EDE--SSEED SEDEEPPPKR RLQKKTPAKS PGKAASMKQR GSKPAPKVPA ENSP00000312625/1-553 EDE--SSEED SEDEEPPPKR RLQKKTPAKS PGKAASVKQR GSKPAPKVSA ENSBTAP00000024825/1-555 EDEDDSSEED SEDEEPPPKR RLQKKTPVKS PGKAAAMKQR GSKLAPKVPA BACU005744/1-414 EDE--SSEED SEDEEPPPKR RLQKKTPAKS PGKAASMKQR GSKPAPKVPA 551 600 ENSTTRP00000010701/1-548 AQRGKARPLP KKAPPKAKTP AKKARPSPPV IKKPSGSSSK KPAASVRKEV bmy_19176T0/1-613 AQRGKARPLP KKAPPKAKTP AKKARPSPPV IKKPSGSSSK KPAASVRKEV ENSP00000312625/1-553 AQRGKARPLP KKAPPKAKTP AKKTRPSSTV IKKPSGGSSK KPATSARKEV ENSBTAP00000024825/1-555 AQRGKTRPLP KKAPPKAKSP AKKARPSPSV IKKPSGSSSK KPAASVRKEV BACU005744/1-414 AQRGKARPLP KKAPPKAKTP AKKARPSPPV IKKPSGSSSK KPAASVRKEV 601 650 ENSTTRP00000010701/1-548 KLPGKGKSTM KKSFKAKK bmy_19176T0/1-613 KLPGKGKSTM KKSFKAKK ENSP00000312625/1-553 KLPGKGKSTM KKSFRVKK ENSBTAP00000024825/1-555 KLPGKGKSTM KKSFKAKK BACU005744/1-414 KLPGKGKSTM KKSFKAKK