KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:10 2014 Check: 00 .. Name: ENSTTRP00000013285/1-485 Len: 487 Check: 236 Weight: 1.00 Name: ENSBTAP00000024834/1-442 Len: 487 Check: 1957 Weight: 1.00 Name: ENSP00000376403/1-486 Len: 487 Check: 5766 Weight: 1.00 Name: bmy_19494T0/1-446 Len: 487 Check: 2326 Weight: 1.00 Name: BACU011486/1-442 Len: 487 Check: 1424 Weight: 1.00 // 1 50 ENSTTRP00000013285/1-485 VRGRGSKQQQ PTSRPGQKLR SPSPAGKCVS -QPGGTQLGP GLGARMAIQE ENSBTAP00000024834/1-442 ---------- ---------- ---------- ---------- -----MAIHR ENSP00000376403/1-486 MRGRGSQQQQ PTRRQGQKLP SPSPAGKYES AQPGGTQPEP GLGARMAIHK bmy_19494T0/1-446 ---------- ---------- ---------- ---------- -MGARMAIQK BACU011486/1-442 ---------- ---------- ---------- ---------- -----MAIQK 51 100 ENSTTRP00000013285/1-485 AVLICLGLPL LLLPGARAQN HAPAGCSPDL NPLYYNLCDR SGAWGIVLEA ENSBTAP00000024834/1-442 TVLMCLGLPL FLLPGARAQE QAPPGCSPDL NPLYYNLCDR SEAWGIILEA ENSP00000376403/1-486 ALVMCLGLPL FLFPGAWAQG HVPPGCSQGL NPLYYNLCDR SGAWGIVLEA bmy_19494T0/1-446 ALLMCLGLPL FLLPGAQTQN HAPSGCSPDL SPLYYNLCDR SGAWGIILEA BACU011486/1-442 AVLMCLGLAL FLLPGARAQN HAPSGCSPDL NPLYYNLCDR SGAWGIVLEA 101 150 ENSTTRP00000013285/1-485 VAGAGIVTTF VLTIFLVASL PFVQDTKKRS LLGTQVFFLL GTLGLFCLVF ENSBTAP00000024834/1-442 VAGAGVVTTF VLTIILVASL PFVQDTKKRS LLGTQVFFLL GTLGLFCLVF ENSP00000376403/1-486 VAGAGIVTTF VLTIILVASL PFVQDTKKRS LLGTQVFFLL GTLGLFCLVF bmy_19494T0/1-446 VAGAGIVTTF VLTIILVASL PFVQDTKKRS LLGTQVFFLL GTLGLFCLVF BACU011486/1-442 VAGAGIVTTF VLTIILVASL PFVQDTKKRS LLGTQVLFLL GTLGLFCLVF 151 200 ENSTTRP00000013285/1-485 ACVVKPDFST CASRRFLFGV LFAICFSCLV AHMLALNFLV RKNHGPRGWV ENSBTAP00000024834/1-442 ACVVKPSFST CASRRFLFGV LFAICFSCLV AHVLALHFLV RKNHGPRGWV ENSP00000376403/1-486 ACVVKPDFST CASRRFLFGV LFAICFSCLA AHVFALNFLA RKNHGPRGWV bmy_19494T0/1-446 ACVVKPDFST CASRRFLFGV LFAICFSCLV AHVIALNFLV RKNHGPRGWV BACU011486/1-442 ACVVKPDFST CASRRFLFGV LFAICFSCLV AHVIALNFLI RKNHGPRGWV 201 250 ENSTTRP00000013285/1-485 VFVVALLLSL VEVIINTEWL VITLVRAGGG EGGPPANGSA SWATASPCAV ENSBTAP00000024834/1-442 IFLVALLLSL VEVIINTEWL IITLVRGAGT EGDALGNGSA GWVAVSPCAI ENSP00000376403/1-486 IFTVALLLTL VEVIINTEWL IITLVRGSG- EGGPQGNSSA GWAVASPCAI bmy_19494T0/1-446 VFIVALLLSL VEVIINTEWL IITLVRGGGG EGGPPANGSA GWATASPCAI BACU011486/1-442 VFIVALLLSL VEVIINTEWL IITLVRGGGG EGGPPANGSA GLATASPCAI 251 300 ENSTTRP00000013285/1-485 ANVDFVMALI YVMLLLLCAF AGAWPALCGR FKRWRKHGVF VLLTTATSIA ENSBTAP00000024834/1-442 ANADFVMALI YVMLLLLCAF SGAWSALCGR FKRWRKHGVF ILLTTTASIA ENSP00000376403/1-486 ANMDFVMALI YVMLLLLGAF LGAWPALCGR YKRWRKHGVF VLLTTATSVA bmy_19494T0/1-446 ANMDFVMALI YVMLLLSCAF TGAWPALYGR FKRWRKHGVF VLLTTATSIA BACU011486/1-442 ANVDFVMALI YVMLLLLCAF TGAWPALCGR FKRWRKHGVF VLLTAAASIA 301 350 ENSTTRP00000013285/1-485 IWVVWIVMYT YGNRQHNSPT WDDPTLAITL AANAWAFVLF YVIPEVSQVT ENSBTAP00000024834/1-442 IWVVWIVMYT YGNRQHNSPT WDDPTLAIAL ATNAWAFVLF YVIPEVSQVT ENSP00000376403/1-486 IWVVWIVMYT YGNKQHNSPT WDDPTLAIAL AANAWAFVLF YVIPEVSQVT bmy_19494T0/1-446 IWVVWIVMYT YGNQQRNSPT WDDPTLAITL AANAWAFVLF YVIPEVSQVT BACU011486/1-442 IWLAWVVMYT YGNQQRKSPT WDDPTLAITL AANAWAFVLF YVIPEVSQVT 351 400 ENSTTRP00000013285/1-485 KPSPEQSYQG DLYPTRGVGY ETILKEQKGQ SMFVENKAFS MDEPASAKRP ENSBTAP00000024834/1-442 RSSPEQSYQG DLYPTRGVGY ETILKEQKGQ SMFVENKAFS MDEPASAKRP ENSP00000376403/1-486 KSSPEQSYQG DMYPTRGVGY ETILKEQKGQ SMFVENKAFS MDEPVAAKRP bmy_19494T0/1-446 KASPEQSYQG DLYPTRGVGY ETILKEQQGQ SMFVENKAFS MDEPASAKRP BACU011486/1-442 KASPEQSYQG DLYPTRGVGY ETILKEQKGQ SMFVENKAFS MDEPASAKRP 401 450 ENSTTRP00000013285/1-485 VSPYSGYNGQ LLTSVYQPTE MTLIHKAPXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000024834/1-442 VSPYSGYNGQ LLTSMYQPTE MTLMHKAPSD GAYDVILPRA TANSQVTGSA ENSP00000376403/1-486 VSPYSGYNGQ LLTSVYQPTE MALMHKVPSE GAYDIILPRA TANSQVMGSA bmy_19494T0/1-446 VSPYSGYNGQ LLTGVYQPTE MTLMHKAPSE GAYDVILPRA TANSQVMGSA BACU011486/1-442 VSPYSGYNGQ LLTGVYQPTE MTLMHKAPSE GAYDVILPRA TANSQVMGSA 451 500 ENSTTRP00000013285/1-485 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XNPYVW- ENSBTAP00000024834/1-442 NSTLRAEDIY AAQGRQEATL PKEGKNSQVF RNPYVWD ENSP00000376403/1-486 NSTLRAEDMY SAQSHQAATP PKDGKNSQVF RNPYVWD bmy_19494T0/1-446 NSTLRAEDIY AAQSHQDATL PKEGKNSQVF RNPYVWD BACU011486/1-442 NSTLRAEDIY AAQSHQDATL PKEGKNSQVF RNPYVWD