KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:10 2014 Check: 00 .. Name: bmy_09767T0/1-209 Len: 385 Check: 907 Weight: 1.00 Name: BACU020458/1-385 Len: 385 Check: 8412 Weight: 1.00 Name: ENSTTRP00000015666/1-373 Len: 385 Check: 893 Weight: 1.00 Name: ENSP00000371169/1-373 Len: 385 Check: 1558 Weight: 1.00 Name: ENSBTAP00000024840/1-373 Len: 385 Check: 879 Weight: 1.00 // 1 50 bmy_09767T0/1-209 ---------- ---------- ---------- ---------- -MTVPQIFAS BACU020458/1-385 MATQAHSLSY AGCNFLRQRL VLSTLSGRPV KIRKIRARDD NPGLRDFEAS ENSTTRP00000015666/1-373 MATQAHSLSY AGCNFLRQRL VLSTLSGRPV KIRKIRARDD NPGLRDFEAS ENSP00000371169/1-373 MATQAHSLSY AGCNFLRQRL VLSTLSGRPV KIRKIRARDD NPGLRDFEAS ENSBTAP00000024840/1-373 MASQAHSLSY SGCNFLRQRL VLSTLSGRPV KIRKIRARDD NPGLRDFEAS 51 100 bmy_09767T0/1-209 FM-------- --------TD FSLLWSPSRM T--------- ---------- BACU020458/1-385 FIRLLDKITN GSRIEINQTG TTLYYQPGLL YGGSVEHDCS ILRSIGYYLE ENSTTRP00000015666/1-373 FIRLLDKITN GSRIEINQTG TTLYYQPGLL YGGSVEHDCS ILRSIGYYLE ENSP00000371169/1-373 FIRLLDKITN GSRIEINQTG TTLYYQPGLL YGGSVEHDCS VLRGIGYYLE ENSBTAP00000024840/1-373 FIRLLDKVTN GSRIEINQTG TTLYYQPGLL YGGSMEHDCS VLRGIGYYLE 101 150 bmy_09767T0/1-209 ---PLTP--- ---------- ---------- ---------- ---------- BACU020458/1-385 SLLCLAPFMK HPLRIVLRGV TNDQVDPSVD VLKATALPLL KQFGIDSESF ENSTTRP00000015666/1-373 SLLCLAPFMK HPLRIVLRGV TNDQVDPSVD VLKATALPLL KQFGIDGESF ENSP00000371169/1-373 SLLCLAPFMK HPLKIVLRGV TNDQVDPSVD VLKATALPLL KQFGIDGESF ENSBTAP00000024840/1-373 SLLCLAPFMK HPLRIVLRGV TNDQVDPSVD VLKATALPLL KQFGIDGESF 151 200 bmy_09767T0/1-209 ---------- ---------- ---------- ---------- --GCRYSVRV BACU020458/1-385 ELKIVRRGML PGGGGEVFFS CPVRKVLKPI QLTDPGKIKR IRGMAYSVRV ENSTTRP00000015666/1-373 ELKIVRRGML PGGGGEVFFS CPVRKVLKPI QLTDPGKIKR IRGMAYSVRV ENSP00000371169/1-373 ELKIVRRGMP PGGGGEVVFS CPVRKVLKPI QLTDPGKIKR IRGMAYSVRV ENSBTAP00000024840/1-373 ELKVVRRGMP PGGGGEVFFS CPVRKVLKPI QLIDPGKIKR IRGMAYSVRV 201 250 bmy_09767T0/1-209 SPQMANRIVD SARSILNKFI PDIYIYTDHM KGVNSGRSPG FGLWLVAETT BACU020458/1-385 SPQMANRIVD SARSILNKFI PDIYIYTDHM KGVNSGRSPG FGLWLVAETT ENSTTRP00000015666/1-373 SPQMANRIVD SARSILNKFI PDIYIYTDHM KGVNSGRSPG FGLWLVAETT ENSP00000371169/1-373 SPQMANRIVD SARSILNKFI PDIYIYTDHM KGVNSGKSPG FGLSLVAETT ENSBTAP00000024840/1-373 SPQMANRIVD SARSILNKFI PDIYIYTDHM KGINSGKSPG FGLSLVAETT 251 300 bmy_09767T0/1-209 NGTFLSAELV SNRQGQGAAV LPEDLGRNCA KLLLEEIHRG GCVDSTNQSL BACU020458/1-385 NGTFLSAELV SNRQGQGAAV LPEDLGRNCA KLLLEEIHRG GCVDSTNQSL ENSTTRP00000015666/1-373 NGTFLSAELV SNHQGQGAAV LPEDLGRNCA KLLLEEIHRG GCVDSTNQSL ENSP00000371169/1-373 SGTFLSAELA SNPQGQGAAV LPEDLGRNCA RLLLEEIYRG GCVDSTNQSL ENSBTAP00000024840/1-373 NGTFLSAELA SNPQGQGAAM LPEDLGRNCA RLLLEEIYRG GCVDSTNQSL 301 350 bmy_09767T0/1-209 ALLLMTLGQQ DVSKVLLGPL SPYT------ ------IEFL RHLKSFFQIM BACU020458/1-385 ALLLMTLGQQ DVSKVLLGPL SPYTLVVFLQ PPYAVQIEFL RHLKSFFQIM ENSTTRP00000015666/1-373 ALLLMTLGQQ DVSKVLLGPL SPYT------ ------IEFL RHLKSFFQIM ENSP00000371169/1-373 ALLLMTLGQQ DVSKVLLGPL SPYT------ ------IEFL RHLKSFFQIM ENSBTAP00000024840/1-373 ALLLMTLGQQ DVSKVLLGPL SPYT------ ------IEFL RHLKSFFQIM 351 400 bmy_09767T0/1-209 FKIETKPCGE ELKGGDKVLM TCVGIGFSNL SKTLK BACU020458/1-385 FKIETKPCGE ELKGGDKVLM TCVGIGFSNL SKTLK ENSTTRP00000015666/1-373 FKIETKPCGE ELKGGDKVLM TCVGIGFSNL SKTLK ENSP00000371169/1-373 FKIETKPCGE ELKGGDKVLM TCVGIGFSNL SKTLK ENSBTAP00000024840/1-373 FKIETKPCGE ELKGGDKVLM TCVGIGFSNL SKTLK