KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:12 2014 Check: 00 .. Name: ENSP00000296946/1-435 Len: 456 Check: 9081 Weight: 1.00 Name: ENSBTAP00000024865/1-435 Len: 456 Check: 4010 Weight: 1.00 Name: ENSTTRP00000015800/1-435 Len: 456 Check: 6071 Weight: 1.00 Name: bmy_22252T0/1-419 Len: 456 Check: 7373 Weight: 1.00 Name: BACU011726/1-436 Len: 456 Check: 9224 Weight: 1.00 // 1 50 ENSP00000296946/1-435 MSSPGTESAG KSLQYRVDHL LSAVENELQA GSEKGDPTER ELRVGLEESE ENSBTAP00000024865/1-435 MTSPGTDSPG KSLQYRVDHL LSAVESELQA GSEKGDPTER ELRVGLEESE ENSTTRP00000015800/1-435 MSSLGTDGAG KSLQYRVDHL LSAVESELQA GSEKGDPTER ELRVGLEESE bmy_22252T0/1-419 -------GAG KSLQYRVDHL LSAVESELQA GSEKGDPTER ELRVGLEESE BACU011726/1-436 MSSPGAEGAG KSLQYRVDHL LSAVESELQA GSEKGDPTER ELRVGLEESE 51 100 ENSP00000296946/1-435 LWLRFKELTN EMIVTKNGRR MFPVLKVNVS GLDPNAMYSF LLDFVAADNH ENSBTAP00000024865/1-435 LWLRFKELTN EMIVTKNGRR MFPVLKVNVS GLDPNAMYSF LLDFVAADNH ENSTTRP00000015800/1-435 LWLRFKELTN EMIVTKNGRR MFPVLKVSVS GLDPNAMYSF LLDFVAADNH bmy_22252T0/1-419 LWLRFKELTN EMIVTKNGRR MFPVLKVNVS GLDPNAMYSF LLDFVAADNH BACU011726/1-436 LWLRFKALTN EMIVTKNGRR MFPVLKVNVS GLDPNAMYSF LLDFVAADNH 101 150 ENSP00000296946/1-435 RWKYVNGEWV PGGKPEPQAP SCVYIHPDSP NFGAHWMKAP VSFSKVKLTN ENSBTAP00000024865/1-435 RWKYVNGEWV PGGKPEPQAP SCVYIHPDSP NFGAHWMKAP VSFSKVKLTN ENSTTRP00000015800/1-435 RWKYVNGEWV PGGKPEPQAP SCVYIHPDSP NFGAHWMKAP VSFSKVKLTN bmy_22252T0/1-419 RWKYVNGEWV PGGKPEPQAP SCVYIHPDSP NFGAHWMKAP VSFSKVKLTN BACU011726/1-436 RWKYVNGEWV PGGKPEPQAP SCVYIHPDSP NFGAHWMKAP VSFSKVKLTN 151 200 ENSP00000296946/1-435 KLNGGGQIML NSLHKYEPRI HIVRVGGPQR MITSHCFPET QFIAVTAYQN ENSBTAP00000024865/1-435 KLNGGGQIML NSLHKYEPRI HIVRVGGPQR MITSHCFPET QFIAVTAYQN ENSTTRP00000015800/1-435 KLNGGGQIML NSLHKYEPRI HIVRVGGPQR MITSHCFPET QFIAVTAYQN bmy_22252T0/1-419 KLNGGGQIML NSLHKYEPRI HIVRVGGPQR MIASHCFPET QFIAVTAYQN BACU011726/1-436 KLNGGGQIML NSLHKYEPRI HIVRVGGPQR MITSHCFPET QFIAVTAYQN 201 250 ENSP00000296946/1-435 EEITALKIKY NPFAKAFLDA KERSDHKEMM EEPGDSQQPG YSQW-GWLLP ENSBTAP00000024865/1-435 EEITALKIKY NPFAKAFLDA KERSDHKDML EEAGDGQQSG YNQW-GWLIP ENSTTRP00000015800/1-435 EEITALKIKY NPFAKAFLDA KERSHHKDVM EDPGDSQQSG HSPW-GWLLP bmy_22252T0/1-419 EEITALKIKY NPFAKAFLDA KE-------- ---------- ---------- BACU011726/1-436 EEITALKIKY NPFAKAFLDA KERSDHKDMM EEPGDSQQSG HSPSGGWLIP 251 300 ENSP00000296946/1-435 GTSTLCPPAN PHPQFGGALS LPSTHSCDRY PTLRSHRSSP YPSPYAHRNN ENSBTAP00000024865/1-435 GTSTLCPPAT PHPQFGGPLS LPSTHGCERY PALRSHRPAP YPTPYAHRNS ENSTTRP00000015800/1-435 GTSTLCPPAT PHPQFGGPLS LPSTHGCERY PALRNHRPAP YPSPYAHRNN bmy_22252T0/1-419 --STLCPPAT PHPQFGGPLS LPSTHGCERY PALRNHRPAP YPSPYAHRNN BACU011726/1-436 GTSTLCPPAT PHPQFGGPLS LPSTHGCERY PALRNHRPAP YPSPYAHRNN 301 350 ENSP00000296946/1-435 SPTYSDNSPA CLSMLQSHDN WSSLGMPAHP SMLPVSHNAS PPTSS----- ENSBTAP00000024865/1-435 SPTYSDSSSA CLSMLQPHDN WSSLGMSAHT SMLPMGPNAG PPAGS----- ENSTTRP00000015800/1-435 SPTYSDSSSA CLSMLPSHDN WSSLGMPAHT SMLPMSPNAG SPTGS----- bmy_22252T0/1-419 SPTYSDNTST CLSMLPSHDN WSSLGMPAHT SMLPMSPNTG PPTGSSLSGA BACU011726/1-436 SPTYSDNSSA CLSMLPSHDN WSSLGMPAHT SMLPMSPNTG PPTGS----- 351 400 ENSP00000296946/1-435 ---------- -----SQYPS LWSVSNGAVT PGSQAAAVSN GLGAQFFRGS ENSBTAP00000024865/1-435 ---------- -----SQYPS LWSVSSAAVA PGAQAAGVPS GLGAQFFRGS ENSTTRP00000015800/1-435 ---------- -----SQYPS LWSVSSGTIT PGAQAAGISN GLGAQFFRGS bmy_22252T0/1-419 PSRVSDSSAS PFFHFSQYPS LWSVSNGTIT PGAQTAGMSN GLGAQFFRGS BACU011726/1-436 ---------- -----SQYPS LWSVSNSTIT PGAQTAGMSN GLGAQFFRGS 401 450 ENSP00000296946/1-435 PAHYTPLTHP VSAPSSSGSP LYEGAAAATD IVDSQYDAAA QGRLIASWTP ENSBTAP00000024865/1-435 SAHSAPLAHP VSASSSSGSP LYEGAATATD VADSQYDASA QARLLASWTA ENSTTRP00000015800/1-435 SAHSASLAHP VSAPSSSGSP LYEGASSATD IADSQYDASA QARLLASWTP bmy_22252T0/1-419 SAHSASLAHP VSAPSSSGSP LYDGASTATD IADSQYDASA QARLLASWTP BACU011726/1-436 SAHSASLAHP VSAPSSSGSP LYDGASTATD IADSQYDASA QARLLASWTP 451 500 ENSP00000296946/1-435 VSPPSM ENSBTAP00000024865/1-435 VSPPSM ENSTTRP00000015800/1-435 VSPPSM bmy_22252T0/1-419 VSPPSM BACU011726/1-436 VSPPSM