KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:13 2014 Check: 00 .. Name: ENSP00000382163/1-440 Len: 472 Check: 2564 Weight: 1.00 Name: ENSBTAP00000024868/1-440 Len: 472 Check: 3108 Weight: 1.00 Name: ENSTTRP00000014638/1-414 Len: 472 Check: 4874 Weight: 1.00 Name: BACU010419/1-204 Len: 472 Check: 3020 Weight: 1.00 Name: bmy_08879T0/1-360 Len: 472 Check: 965 Weight: 1.00 // 1 50 ENSP00000382163/1-440 ---------- ---------- MQKGKGRTSR IRRRKLCGSS ESRGVNESHK ENSBTAP00000024868/1-440 ---------- ---------- MKNGGGRTSR IRRRKLFTSS ESRGVNESYK ENSTTRP00000014638/1-414 ---------- ---------- MKNGGGRTSR IRRRKLFTSS ESRGVNESYK BACU010419/1-204 ---------- ---------- ---------- ---------- ---------- bmy_08879T0/1-360 MSTREAAVQA RRTLRNCSFS MKNGGGRTSR IRRRKLFTSS ESRGVNESYK 51 100 ENSP00000382163/1-440 SEFIELRKWL KARKFQDSNL APACFPGT-- ---------- GRGLMSQTSL ENSBTAP00000024868/1-440 PEFIELKKWL KDRRFEDTTL IPAHFPGT-- ---------- GRGLMSKTSL ENSTTRP00000014638/1-414 PEFIELKKWL KDRKFEDTNL IPARFPGT-- ---------- GRGLMSKTSL BACU010419/1-204 ---------- ---------- ---------- ---------- ---------- bmy_08879T0/1-360 PEFIELKKWL KDRKFEDTNL IPAXFPGKDF KDSFRSFPKH GCPKLYFLFG 101 150 ENSP00000382163/1-440 QEGQMIISLP ESCLLTTDTV IRSYLGAYIT KWKPPPSPLL ALCTFLVSEK ENSBTAP00000024868/1-440 QEGQTIISLP ESCLLTTDTV IRSYLGAYIA KWQPPPSPLL ALCTFLVSEK ENSTTRP00000014638/1-414 REGQMIISLP ESCLLTTDTV LRSYLGAYIA KWQPPPSPVL ALCTFLVSEK BACU010419/1-204 ----MIISLP ESCLLTTDTV LRSYLGVYIA NYE------- ---------- bmy_08879T0/1-360 KEGQMIISLP ESCLLTTDTV LRSYLGAYIA KWQPPPSPVL ALCTFLVSEK 151 200 ENSP00000382163/1-440 HAGHRSLWKP YLEILPKAYT CPVCLEPEVV NLLPKSLKAK AEEQRAHVQE ENSBTAP00000024868/1-440 HAGDRSPWKP YLEVLPKAYT CPVCLEPEVV NLLPNPLKTK AWEQRSHVWE ENSTTRP00000014638/1-414 HAGDRSPWKP YLEVLPKAYT CPVCLEPEVV NLLPRPLKAK AREQRTHVQE BACU010419/1-204 ---------- ---------- ---------- ---------- ---------- bmy_08879T0/1-360 HAGDRSPWKP YLEVLPKAYT CPVCLEPEVV NLLPKPLKAK AIEQRTHVQE 201 250 ENSP00000382163/1-440 FFASSRDFFS SLQPLFAEAV DSIFSYSALL WAWCTVNTRA VYLRPRQREC ENSBTAP00000024868/1-440 FFSSSRGFFS SLQPLFSEAV ETIFSYRALR WAWCAVNTRA VYMKRPPLLC ENSTTRP00000014638/1-414 FVSSSRDFFS SLQPLFSEAV ESIFSYSALL WAWCTVNTRA VYMERAPRQC BACU010419/1-204 ---------- ---------- ---------- ---------- ---------- bmy_08879T0/1-360 FVSSSRDFFS SLQPLFSEAV ESIFSYSALL WAWCTVNTRA VYRKRAPRQC 251 300 ENSP00000382163/1-440 LSAEPDTCAL APYLDLLNHS PHVQVKAAFN EETHSYEIRT TSRWRKHEEV ENSBTAP00000024868/1-440 LSPEPDTCAL APYLDLLNHS PDVQVKAAFN EETRCYEIRT ATRCGKHKEV ENSTTRP00000014638/1-414 FSAEPDTCVL APFLDLLNHS PDAQVKAAFN EETRCYEIRT AVSCGKHQEV BACU010419/1-204 ---------- ----ELLT-- ----VKAAFN EETRCYEIRT AVSCGKHKEV bmy_08879T0/1-360 FSAEPDTCVL APFLDLLNHS PDAQVKAAFN EETRCYEIRT AVSCGKHKEV 301 350 ENSP00000382163/1-440 FICYGPHDNQ RLFLEYGFVS VHNPHACVYV SREILVKYLP STDKQMDKKI ENSBTAP00000024868/1-440 FICYGPHDNH RLLLEYGFVC VSNPHACVYV SKDILVKYLP STAKQMNKKI ENSTTRP00000014638/1-414 LICYGPHDNH RLLLEYGFVS VRNPHACVYV SKDILVKYLP STYKRMNQKI BACU010419/1-204 LICYGPHDNH RLLLEYGFVS IRNPHACVYV SKDILVKYLP STDKRMNQKI bmy_08879T0/1-360 LICYGPHDNH RLLLEYGFVS IRNPHACVYV SKDILVKYLP STDKRMNQKI 351 400 ENSP00000382163/1-440 SILKDHGYIE NLTFGWDGPS WRLLTALKLL CLEAEKFTCW KKVLLGEVIS ENSBTAP00000024868/1-440 SILEDHDFTE NLTFGWDGPS WRLLTALKLL CLEAEEFTCW KKVLLGEIIS ENSTTRP00000014638/1-414 SILEDHDFIE NLTFGWDGPS WRLLTALKLL CLEAEELTCW KKVLIGEIIS BACU010419/1-204 SILEDHDFIE ---------- ---------- -------TCW KKVLIGEIIS bmy_08879T0/1-360 SILEDHDFIE ---------- ---------- ---------- ---------- 401 450 ENSP00000382163/1-440 DTNEKTSLDI AQKICYYFIE ETNAVLQKVS HMKDEKEALI NQLTLVESLW ENSBTAP00000024868/1-440 DTNEKASLDV AQKICHYFIE ETHAVLRKVS RMKDEEVALM NQLTLVETLR ENSTTRP00000014638/1-414 DTNEKASLDI AQKICHYFIK ESKAVLQKVC HMKDEEVALI NQLTLV---- BACU010419/1-204 DTNEKTSLDI AQKICHYFIK ESKAVLQKIS HMKDEEVALI NQLTLVETLW bmy_08879T0/1-360 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000382163/1-440 TEELKILRAS AETLHSLQTA FT ENSBTAP00000024868/1-440 TEELKILQAS AKALTTLQTA FS ENSTTRP00000014638/1-414 ---------- ---------- -- BACU010419/1-204 TEELKILQAS AETLTSLQTA FT bmy_08879T0/1-360 ---------- ---------- --