KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:16 2014 Check: 00 .. Name: ENSBTAP00000024887/1-611 Len: 691 Check: 1961 Weight: 1.00 Name: ENSTTRP00000000444/1-611 Len: 691 Check: 1715 Weight: 1.00 Name: ENSP00000259021/1-611 Len: 691 Check: 1723 Weight: 1.00 Name: bmy_06734T0/1-647 Len: 691 Check: 4138 Weight: 1.00 Name: BACU006418/1-691 Len: 691 Check: 1211 Weight: 1.00 // 1 50 ENSBTAP00000024887/1-611 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000444/1-611 ---------- ---------- ---------- ---------- ---------- ENSP00000259021/1-611 ---------- ---------- ---------- ---------- ---------- bmy_06734T0/1-647 ---------- ----PEVEEK APQPAAPAQK AVDAVKQEAL GIVRRIGTAT BACU006418/1-691 MRRRRKGERH TQSQPEVEEK APQPAAPAQK AVDAVKQEAL GIVRRIGTAT 51 100 ENSBTAP00000024887/1-611 ---------- ---------- ---------- MPRRKRNAGS SSDGTEDSDF ENSTTRP00000000444/1-611 ---------- ---------- ---------- IPRRKRNAGS SSDGTEDSDF ENSP00000259021/1-611 ---------- ---------- ---------- MPRRKRNAGS SSDGTEDSDF bmy_06734T0/1-647 EAATEPAGAT VPTAAAAAAR IGTVGPQPPA MPRRKRNAGS SSDGTEDSDF BACU006418/1-691 EAATEPAGAT VPTAAAAAAR IGTVGPQPPA MPRRKRNAGS SSDGTEDSDF 101 150 ENSBTAP00000024887/1-611 STDLEHTDSS ESDGTSRRSA RVTRSSARLS QSSQDSSPVR NLQSFGTEEP ENSTTRP00000000444/1-611 STDLEHTDSS ESDGTSRRSA RVTRSSARLS QSSQDSSPVR NLQSFGTEEP ENSP00000259021/1-611 STDLEHTDSS ESDGTSRRSA RVTRSSARLS QSSQDSSPVR NLQSFGTEEP bmy_06734T0/1-647 STDLEHTDSS ESDGTSRRSA RVTRSSARLS QSSQDSSPVR NLQSFGTEEP BACU006418/1-691 STDLEHTDSS ESDGTSRRSA RVTRSSARLS QSSQDSSPVR NLQSFGTEEP 151 200 ENSBTAP00000024887/1-611 AYSTRRVTRS QQQPTPVTPK KYPLRQTRSS GSETEQVVDF SDRETKNTAD ENSTTRP00000000444/1-611 AYSTRRVTRS QQQPTPVTPK KYPLRQTRSS GSETEQVVDF SDRETKNTAD ENSP00000259021/1-611 AYSTRRVTRS QQQPTPVTPK KYPLRQTRSS GSETEQVVDF SDRETKNTAD bmy_06734T0/1-647 AYSTRRVTRS QQQPTPVTPK KYPLRQTRSS GSETEQVVDF SDRETKNTAD BACU006418/1-691 AYSTRRVTRS QQQPTPVTPK KYPLRQTRSS GSETEQVVDF SDRETKNTAD 201 250 ENSBTAP00000024887/1-611 HDESPPRTPT GNAPSSESDI DISSPNVSHD ESIAKDMSLK DSGSDLSHRP ENSTTRP00000000444/1-611 HDESPPRTPT GNAPSSESDI DISSPNVSHD ESIAKDMSLK DSGSDLSHRP ENSP00000259021/1-611 HDESPPRTPT GNAPSSESDI DISSPNVSHD ESIAKDMSLK DSGSDLSHRP bmy_06734T0/1-647 HDESPPRTPT GNAPSSESDI DISSPNVSHD ESIAKDMSLK DSGSDLSHRP BACU006418/1-691 HDESPPRTPT GNAPSSESDI DISSPNVSHD ESIAKDMSLK DSGSDLSHRP 251 300 ENSBTAP00000024887/1-611 KRRRFHESYN FNMKCPTPGC NSLGHLTGKH ERHFSISGCP LYHNLSADEC ENSTTRP00000000444/1-611 KRRRFHESYN FNMKCPTPGC NSLGHLTGKH ERHFSISGCP LYHNLSADEC ENSP00000259021/1-611 KRRRFHESYN FNMKCPTPGC NSLGHLTGKH ERHFSISGCP LYHNLSADEC bmy_06734T0/1-647 KRRRFHESYN FNMKCPTPGC NSL------- ---------- ---------- BACU006418/1-691 KRRRFHESYN FNMKCPTPGC NSLGHLTGKH ERHFSISGCP LYHNLSADEC 301 350 ENSBTAP00000024887/1-611 KVRAQSRDKQ IEERMLSHRQ DDNNRHATRH QAPSERQLRY KEKVAELRKK ENSTTRP00000000444/1-611 KVRAQSRDKQ IEERMLSHRQ DDNNRHATRH QAPTERQLRY KEKVAELRKK ENSP00000259021/1-611 KVRAQSRDKQ IEERMLSHRQ DDNNRHATRH QAPTERQLRY KEKVAELRKK bmy_06734T0/1-647 ---AQSRDKQ IEERMLSHRQ DDNNRHATRH QAPTERQLRY KEKVAELRKK BACU006418/1-691 KVRAQSRDKQ IEERMLSHRQ DDNNRHATRH QAPTERQLRY KEKVAELRKK 351 400 ENSBTAP00000024887/1-611 RNSGLSKEQK EKYMEHRQTY GNTREPLLEN LTSEYDLDLF RRAQARASED ENSTTRP00000000444/1-611 RNSGLSKEQK EKYMEHRQTY GNTREPLLEN LTSEYDLDLF RRAQARASED ENSP00000259021/1-611 RNSGLSKEQK EKYMEHRQTY GNTREPLLEN LTSEYDLDLF RRAQARASED bmy_06734T0/1-647 RNSGLSKEQK EKYMEHRQTY GNTREPLLEN LTSEYDLDLF RRAQARASED BACU006418/1-691 RNSGLSKEQK EKYMEHRQTY GNTREPLLEN LTSEYDLDLF RRAQARASED 401 450 ENSBTAP00000024887/1-611 LEKLRLQGQI TEGSNMIKTI AFGRYELDTW YHSPYPEEYA RLGRLYMCEF ENSTTRP00000000444/1-611 LEKLRLQGQI TEGSNMIKTI AFGRYELDTW YHSPYPEEYA RLGRLYMCEF ENSP00000259021/1-611 LEKLRLQGQI TEGSNMIKTI AFGRYELDTW YHSPYPEEYA RLGRLYMCEF bmy_06734T0/1-647 LEKLRLQGQI TEGSNMIKTI AFGRYELDTW YHSPYPEEYA RLGRLYMCEF BACU006418/1-691 LEKLRLQGQI TEGSNMIKTI AFGRYELDTW YHSPYPEEYA RLGRLYMCEF 451 500 ENSBTAP00000024887/1-611 CLKYMKSQTI LRRHMAKCVW KHPPGDEIYR KGSISVFEVD GKKNKIYCQN ENSTTRP00000000444/1-611 CLKYMKSQTI LRRHMAKCVW KHPPGDEIYR KGSISVFEVD GKKNKIYCQN ENSP00000259021/1-611 CLKYMKSQTI LRRHMAKCVW KHPPGDEIYR KGSISVFEVD GKKNKIYCQN bmy_06734T0/1-647 CLKYMKSQTI LRRHMAKCVW KHPPGDEIYR KGSISVFEVD GKKNKIYCQN BACU006418/1-691 CLKYMKSQTI LRRHMAKCVW KHPPGDEIYR KGSISVFEVD GKKNKIYCQN 501 550 ENSBTAP00000024887/1-611 LCLLAKLFLD HKTLYYDVEP FLFYVMTEAD STGCHLIGYF SKEKNSFLNY ENSTTRP00000000444/1-611 LCLLAKLFLD HKTLYYDVEP FLFYVMTEAD NTGCHLIGYF SKEKNSFLNY ENSP00000259021/1-611 LCLLAKLFLD HKTLYYDVEP FLFYVMTEAD NTGCHLIGYF SKEKNSFLNY bmy_06734T0/1-647 LCLLAKLFLD HKTLYYDVEP FLFYVMTEAD NTGCHLIGYF SKEKNSFLNY BACU006418/1-691 LCLLAKLFLD HKTLYYDVEP FLFYVMTEAD NTGCHLIGYF SKEKNSFLNY 551 600 ENSBTAP00000024887/1-611 NVSCILTMPQ YMRQGYGKML IDFSYLLSKV EEKVGSPERP LSDLGLISYR ENSTTRP00000000444/1-611 NVSCILTMPQ YMRQGYGKML IDFSYLLSKV EEKVGSPERP LSDLGLISYR ENSP00000259021/1-611 NVSCILTMPQ YMRQGYGKML IDFSYLLSKV EEKVGSPERP LSDLGLISYR bmy_06734T0/1-647 NVSCILTMPQ YMRQGYGKML IDFSYLLSKV EEKVGSPERP LSDLGLISYR BACU006418/1-691 NVSCILTMPQ YMRQGYGKML IDFSYLLSKV EEKVGSPERP LSDLGLISYR 601 650 ENSBTAP00000024887/1-611 SYWKEVLLRY LHNFQGKEIS IKEISQETAV NPVDIVSTLQ ALQMLKYWKG ENSTTRP00000000444/1-611 SYWKEVLLRY LHNFQGKEIS IKEISQETAV NPVDIVSTLQ ALQMLKYWKG ENSP00000259021/1-611 SYWKEVLLRY LHNFQGKEIS IKEISQETAV NPVDIVSTLQ ALQMLKYWKG bmy_06734T0/1-647 SYWKEVLLRY LHNFQGKEIS IKEISQETAV NPVDIVSTLQ ALQMLKYWKG BACU006418/1-691 SYWKEVLLRY LHNFQGKEIS IKEISQETAV NPVDIVSTLQ ALQMLKYWKG 651 700 ENSBTAP00000024887/1-611 KHLVLKRQDL IDEWIAKEAK RSNSNKTMDP SCLKWTPPKG T ENSTTRP00000000444/1-611 KHLVLKRQDL IDEWIAKEAK RSNSNKTMDP SCLKWTPPKG T ENSP00000259021/1-611 KHLVLKRQDL IDEWIAKEAK RSNSNKTMDP SCLKWTPPKG T bmy_06734T0/1-647 KHLVLKRQDL IDEWIAKEAK RSNSNKTMDP SCLKWTPPKG T BACU006418/1-691 KHLVLKRQDL IDEWIAKEAK RSNSNKTMDP SCLKWTPPKG T