KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:17 2014 Check: 00 .. Name: ENSTTRP00000004816/1-824 Len: 826 Check: 9716 Weight: 1.00 Name: ENSP00000358716/1-824 Len: 826 Check: 6415 Weight: 1.00 Name: ENSBTAP00000024914/1-825 Len: 826 Check: 9579 Weight: 1.00 Name: bmy_18809T0/1-741 Len: 826 Check: 5371 Weight: 1.00 Name: BACU002705/1-824 Len: 826 Check: 4737 Weight: 1.00 // 1 50 ENSTTRP00000004816/1-824 MAMAFEGSAA LKTVESTMPA ERVAAQFAAP EPATRPVRSL RTAHDINSPR ENSP00000358716/1-824 MAAAFEASGA LAAVATAMPA EHVAVQVPAP EPTPGPVRIL RTAQDLSSPR ENSBTAP00000024914/1-825 MAAAFEAPAA LETVETAMPA ERVATHFSAP EPASRPVRTL RTAHDISGPR bmy_18809T0/1-741 ---------- ---------- ---------- -MSSHPL--- -----VSGKL BACU002705/1-824 MAAALEAPAA LKTMESTMPA ERVAAQFAAP EPAPRPVRSL RTAHDISGPR 51 100 ENSTTRP00000004816/1-824 TRTGDVLLAE PGDFESMLLS RPVVEGLRAV GFERPSPVQL KAIPLGRCGL ENSP00000358716/1-824 TRTGDVLLAE PADFESLLLS RPVLEGLRAA GFERPSPVQL KAIPLGRCGL ENSBTAP00000024914/1-825 TRTGDVLLAE PADFESLLLS RPVLEGLRAV GFERPSPVQL KAIPLGRCGL bmy_18809T0/1-741 ALAGEEL--- -GDRKWVLGT SCSLAQLTG- --EKQSPLE- ---------- BACU002705/1-824 TRTGDVLLAE PGDFESLLLS RPVLEGLQAV GFERPSPVQL KAIPLGRCGL 101 150 ENSTTRP00000004816/1-824 DLIVQAKSGT GKTCVFSTIA LDSLVLENLS TQILILAPTR EIAVQIHSVI ENSP00000358716/1-824 DLIVQAKSGT GKTCVFSTIA LDSLVLENLS TQILILAPTR EIAVQIHSVI ENSBTAP00000024914/1-825 DLIVQAKSGT GKTCVFSTIA LDSLVLENLS TQILILAPTR EIAVQIHSVI bmy_18809T0/1-741 ---------- ---------- ------GEPS LGILILAPTR EIAVQIHSVI BACU002705/1-824 DLIVQAKSGT GKTCVFSTIA LDSLVLENLS TQILILAPTR EIAVQIHSVI 151 200 ENSTTRP00000004816/1-824 TAIGIKMEGL ECHVFIGGTP LSQDKTRLKK CHIAVGSPXX XXXXXXXXXX ENSP00000358716/1-824 TAIGIKMEGL ECHVFIGGTP LSQDKTRLKK CHIAVGSPGR IKQLIELDYL ENSBTAP00000024914/1-825 TAIGIKMEGL ECHVFIGGTP LSQDKTRLKK CHIAVGSPGR IKQLIELDYL bmy_18809T0/1-741 TAIGIKMEGL ECHVFIGGTP LSQDKTRLKK CHIAVGSPGR IKQLIELDYL BACU002705/1-824 TAIGIKMEGL ECHVFIGGTP LSQDKTRLKK CHIAVGSPGR IKQLIELDYL 201 250 ENSTTRP00000004816/1-824 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000358716/1-824 NPGSIRLFIL DEADKLLEEG SFQEQINWIY SSLPASKQML AVSATYPEFL ENSBTAP00000024914/1-825 NPGSIRLFIL DEADKLLEEG SFQEQINWIY SSLPASKQML AVSATYPEFL bmy_18809T0/1-741 NPGSIRLFIL DEADKLLEEG SFQEQINWIY SSLPASKQML AVSATYPEFL BACU002705/1-824 NPGSIRLFIL DEADKLLEEG SFQEQINWIY SSLPASKQML AVSATYPEFL 251 300 ENSTTRP00000004816/1-824 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000358716/1-824 ANALTKYMRD PTFVRLNSSD PSLIGLKQYY KVVNSYPLAH KVFEEKTQHL ENSBTAP00000024914/1-825 ANALTKYMRE PTFVRLNSSD PSLIGLKQYY KIVNSYPLAH KIFEEKTQHL bmy_18809T0/1-741 ANALTKYMRE PTFVRLNSSD PSLIGLKQYY KVVSSYPLAH KIFEEKTQHL BACU002705/1-824 ANALTKYMRE PTFVRLNSSD PSLIGLKQYY KVVSSYPLAH KIFEEKTQHL 301 350 ENSTTRP00000004816/1-824 XXXXXXXXXX XXXXXXXXXX XAQHLADILS SKGFPAECIS GNMNQNQRLD ENSP00000358716/1-824 QELFSRIPFN QALVFSNLHS RAQHLADILS SKGFPAECIS GNMNQNQRLD ENSBTAP00000024914/1-825 QELFSKIPFN QALVFSNLHS RAQHLADILS SKGFPAEYIS GNMDQNRRLD bmy_18809T0/1-741 QELFSKIPFN QALVFSNLHS RAQHLADILS SKGFPAECIS GNMNQNQRLD BACU002705/1-824 QELFSKIPFN QALVFSNLHS RAQHLADILS SKGFPAECIS GNMNQNQRLD 351 400 ENSTTRP00000004816/1-824 AMAKLKQFHC RVLVSTDLTS RGIDAENVNL VVNLDVPLNW ETYMHRIGRA ENSP00000358716/1-824 AMAKLKHFHC RVLISTDLTS RGIDAEKVNL VVNLDVPLDW ETYMHRIGRA ENSBTAP00000024914/1-825 AMAKLKQFHC RVLISTDLTS RGIDAEKVNL VVNLDVPLDC ETYMHRIGRA bmy_18809T0/1-741 AMAKLKQFHC RVLVSTDLTS RGIDAENVNL VVNLDVPLDW ETYMHRIGRA BACU002705/1-824 AMAKLKQFHC RVLVSTDLTS RGIDAENVNL VVNLDVPLDW ETYMHRIGRA 401 450 ENSTTRP00000004816/1-824 GRFGTLGLTV TYCCRGEEEN MMMKIAQKCK INLQPLPDPI PPGLMEECLD ENSP00000358716/1-824 GRFGTLGLTV TYCCRGEEEN MMMRIAQKCN INLLPLPDPI PSGLMEECVD ENSBTAP00000024914/1-825 GRFGTLGLTV TYCCRGEEEN MMMKIAQKCT INLLPLPDPI PPDLMEECLD bmy_18809T0/1-741 GRFGTLGLTV TYCCRGEEEN MVMKIAQKCK INLLPLPDPI PPGLMEECLD BACU002705/1-824 GRFGTLGLTV TYCCRGEEEN MVMKIAQKCK TNLLPLPDPI PPGLMEECLD 451 500 ENSTTRP00000004816/1-824 WDVEVEAAMH TYGLASIPTQ TLKQ-IQKIE STFQTQKAHG NHMASSRNTS ENSP00000358716/1-824 WDVEVKAAVH TYGIASVPNQ PLKKQIQKIE RTLQIQKAHG DHMASSRNNS ENSBTAP00000024914/1-825 WDVEVEAAMH TYGLASVPTQ PLKKHIQKIE RTFQTQKAHG KHMASSRNTS bmy_18809T0/1-741 WDVEVEAAMH AYGLASIPTQ TLKQ-IQKIE STFQTQKAHG SHMASSRNTS BACU002705/1-824 WDVEVEAAMH AYGLASIPTQ TLKQ-IQKIE STFQTQKAHG SHMASSRNTS 501 550 ENSTTRP00000004816/1-824 VSALSVKSKN NTKQKLPVKS HSECGIVEKA MSPKELGCAV QLEEQMKNSI ENSP00000358716/1-824 VSGLSVKSKN NTKQKLPVKS HSECGIIEKA TSPKELGCDR QSEEQMKNSV ENSBTAP00000024914/1-825 ISTVSVKSKS NTKQKLPVKS HSECGIVEKV ISPKELGCAV QPEEQMKNSV bmy_18809T0/1-741 VSALSVKSKN NTKQKLPVKS HSECGIVEKA MSPKELGCAV QLEEQMKBSI BACU002705/1-824 VSALSVKSKN NTKQKLPVKS HSECGIVEKA MSPKELGCAV QLEEQMKNSI 551 600 ENSTTRP00000004816/1-824 QSSVENSTNS QHQVKEA-SV SLPKIPCLSS FKTHLPCTLT FAELMEDYEH ENSP00000358716/1-824 QTPVENSTNS QHQVKEALPV SLPQIPCLSS FKIHQPYTLT FAELVEDYEH ENSBTAP00000024914/1-825 QTSIENPTNS QHQVKEA-SV SLPKIPCLSS FKTHLPCILT FAELVEDYEH bmy_18809T0/1-741 QTSVENSTNS QNQVKEA-SV SLPKIPCLSS FKTHLPCTLT FAELMEDYEH BACU002705/1-824 QTSVENSTNS QHQVKEA-SV SLPKIPCLSS FKTHLPCTLT FAELVEDYEH 601 650 ENSTTRP00000004816/1-824 YIKEGLEKPV EVIRHYTGPG DQTVNPQNGF VRNRITEERV QTLASSSQSG ENSP00000358716/1-824 YIKEGLEKPV EIIRHYTGPG DQTVNPQNGF VRNKVIEQRV PVLASSSQSG ENSBTAP00000024914/1-825 YIKEGLEKPV EIIRHYTGPG DQSVNPQNGF VKNRITEERV QILASSSQSG bmy_18809T0/1-741 YIKEGLEKPV EIIRHYTGPG DQTVNPQNGF VRNRITEERV QILTSSSQSG BACU002705/1-824 YIKEGLEKPV EIIRHYTGPG DQTVNPQNGF VRNRITEERV QILTSSSQSG 651 700 ENSTTRP00000004816/1-824 DSESDSDSYS SRSSSQSKGS KSYLEGSSDT QLKDLESIPV GGHISLEQPL ENSP00000358716/1-824 DSESDSDSYS SRTSSQSKGN KSYLEGSSDN QLKDSESTPV DDRISLEQPP ENSBTAP00000024914/1-825 DSESDSDSYS SRTSSQSKGN KSYLEVSSDT QLKDSESIPM DGHISLEQPL bmy_18809T0/1-741 DSESDSDSYS SRTSSQSKGS KSYLEGSSDT QLKDLESIPV GGHISLEQPL BACU002705/1-824 DSESDSDSYS SRTSSQSKGS KSYLEGSSDT QLKDLESIPV GGHISLEQPL 701 750 ENSTTRP00000004816/1-824 NGNDPPHLVE YQESPEIKIK TRHKEGANHN QRAKQSQRSL PRRSSYRLQA ENSP00000358716/1-824 NGSDTPNPEK YQESPGIQMK TRLKEGA--S QRAKQSRRNL PRRSSFRLQT ENSBTAP00000024914/1-825 NGNDTPSLVE YQESTEIQVK TRHKEGANHN QRAKQSRRNL PRRSSYRLQT bmy_18809T0/1-741 NGNDTPXLVE YQESPEIQIK ARHKEGANHN QRAKQSRRNL PRRSSYRLQT BACU002705/1-824 NGNDTPRLVE YQESPEIQIK ARHKEGANHN QRAKQSRRNL PRRSSYRLQT 751 800 ENSTTRP00000004816/1-824 EPQEDGWYDR HRETHPSFSD TYQDYEEYWR AYYRAWQEYY ASASQSYYWN ENSP00000358716/1-824 EAQEDDWYDC HREIRLSFSD TYQDYEEYWR AYYRAWQEYY AAASHSYYWN ENSBTAP00000024914/1-825 EPQEDGWYDC QRETHPSFSD TYQDYEEYWR AYYRAWQEYY AAASQSYYWN bmy_18809T0/1-741 EPQEDGWYDH HRETHPSFSN TYQDYEEYWR AYYRAWQEYY AAASQPYYWN BACU002705/1-824 EPQEDFWYDH HRETHPSFSN TYQDYEEYWK AYYRAWQEYY AAASQPYYWN 801 850 ENSTTRP00000004816/1-824 AQRHPSWMAA YHMNTVYLQE MMRGNQ ENSP00000358716/1-824 AQRHPSWMAA YHMNTIYLQE MMHSNQ ENSBTAP00000024914/1-825 AQRHPSWMAA YQMNTVYLQE MMHSTQ bmy_18809T0/1-741 AQSHPSWMAA YHMNTIYVQE MMRGNQ BACU002705/1-824 AQSHPNWMAA YHMNTIYLQE MMRGNQ