KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:19 2014 Check: 00 .. Name: ENSP00000364956/1-1019 Len: 1080 Check: 9318 Weight: 1.00 Name: ENSBTAP00000024919/1-1013 Len: 1080 Check: 3269 Weight: 1.00 Name: bmy_09920T0/1-1059 Len: 1080 Check: 6076 Weight: 1.00 Name: BACU005673/1-1021 Len: 1080 Check: 72 Weight: 1.00 Name: ENSTTRP00000010851/1-1020 Len: 1080 Check: 6480 Weight: 1.00 // 1 50 ENSP00000364956/1-1019 ---------- ---------- ---------- -MEPGEVKDR ILENISLSV- ENSBTAP00000024919/1-1013 ---------- ---------- ---------- ---------- ---XISLSV- bmy_09920T0/1-1059 MFALLPLSEP VTFLVPSRIL SSWGSVLPAS WEEGQTVQDR GLSGASRAAG BACU005673/1-1021 ---------- ---------- ---------- -MEPREVKDR ILENISLSV- ENSTTRP00000010851/1-1020 ---------- ---------- ---------- ---------R ILENISLSV- 51 100 ENSP00000364956/1-1019 ----KKLQSY FAACEDEIPA IRNHDKVLQR LCEHLDHALL YGLQDLSSGY ENSBTAP00000024919/1-1013 ----KKLQSY FAACEDETPA IRNHDKVLQR LCEHLDHALL YGLQDLSSGY bmy_09920T0/1-1059 LTPGHRLQSY FAACEDETPA IRNHDKVLQR LCEHLDHALL YGLQDLSSGY BACU005673/1-1021 ----KKLQSY FAACEDETPA IRNHDKVLQR LCEHLDHALL YGLQDLSSGY ENSTTRP00000010851/1-1020 ----KKLQSY FAACEDETPA IRNHDKVLQR LCEHLDHALL YGLQDLSSGY 101 150 ENSP00000364956/1-1019 WVLVVHFTRR EAIKQIEVLQ HVATNLGRSR AWLYLALNEN SLESYLRLFQ ENSBTAP00000024919/1-1013 WVLVVHFTRR EAVKHIEVLQ HVATNLGRSR AWLYLALNEN SLESYLRLFQ bmy_09920T0/1-1059 WVLVVHFTRR EAIKQIEVLQ HVATNLGRSR AWLYLALNEN SLESYLRLFQ BACU005673/1-1021 WVLVVHFTRR EAIRQIEVLQ HVATNLGRSR AWLYLALNEN SLESYLRLFQ ENSTTRP00000010851/1-1020 WVLVVHFTRR EAIKQIEVLQ HVATNLGRSR AWLYLALNEN SLESYLRLFQ 151 200 ENSP00000364956/1-1019 ENLGLLHKYY VKNALVCSHD HLTLFLTLVS GLEFIRFELD L--------- ENSBTAP00000024919/1-1013 ENLGLLHKYY VKNALVCSHD HLTLFLTLVS GLEFIRFDLD L--------- bmy_09920T0/1-1059 ENLGLLHKYY VKNALVCSHD HLTLFLTLVS GLEFIRFDLD LVREQLRVRP BACU005673/1-1021 ENLGLLHKYY V------NHD HLTLFLTLVS GLEFIRFDLD L--------- ENSTTRP00000010851/1-1020 ENLGLLHKYY VKNALVCSHD HLTLFLTLVS GLEFIRFDLD L--------- 201 250 ENSP00000364956/1-1019 -------DAP YLDLAPYMPD YYKPQYLLDF EDRLPSSVHG SDSLSLNSFN ENSBTAP00000024919/1-1013 -------DAP YLDLAPYMPD YYKPQYLLDF EDRLPSSVHG SDSLSLNSFN bmy_09920T0/1-1059 VERCGVEDAP YLDLAPYMPD YYKPQYLLDF EDRLPSSVHG SDSLSLNSFN BACU005673/1-1021 -------DAP YLDLAPYMPD YYKPQYLLDF EDRLPSSVHG SDSLSLNSFN ENSTTRP00000010851/1-1020 -------DAP YLDLAPYMPD YYKPQYLLDF EDRLPSSVHG SDSLSLNSFN 251 300 ENSP00000364956/1-1019 SVTSTNLEWD DSAIAPSSED YDFGDVFPAV PSVPSTDWED GDLTDTVSGP ENSBTAP00000024919/1-1013 SVTSTTLEWD DSAIAPSSED YDFGDVFPAV PSVPSTDWED GDLTDTVSGP bmy_09920T0/1-1059 SVTSTTLEWD DSAIAPSS-- ---------- --------ED GDLTDTVSGP BACU005673/1-1021 SVTSTTLEWD DSAIAPSSED YDFGDVFPAV PSVPSTDWED GDLTDTVSGP ENSTTRP00000010851/1-1020 SVTSTTLEWD DSAIAPSSED YDFGDVFPAV PSVPSTDWED GDLTDTVSGP 301 350 ENSP00000364956/1-1019 RSTASDLTSS KASTRSPTQR QNPFNEEPAE TVSSSDTTPV HTTSQEKEEA ENSBTAP00000024919/1-1013 RSTTSDPTSS KASTKSPTQR HNPFNEDQAE TVSSSDTTPV HTSSQEKGES bmy_09920T0/1-1059 RSTASDPTSS KASTKSPTQR HNPFNEDQAE TVSSSDTTPV HTASQEKGEP BACU005673/1-1021 RSTASDPTSS KASTKSPTQR HNPFNEDQAE TVSSSDTTPV HTASQEKGEP ENSTTRP00000010851/1-1020 RSTASDPASS KASTKSPTQR HNPFNEDQAE TVSSSDTTPV HTASQEKGEP 351 400 ENSP00000364956/1-1019 QALDPPDACT ELEVIRVTKK KKIGKKKKSR SDEEASPLHP ACSQKKCAKQ ENSBTAP00000024919/1-1013 HTPDLPDTCT ELEVIRVTKK KKTGKKKKPR SDEEASPLHP ASTQHTCARQ bmy_09920T0/1-1059 HTPDLPDTCT ELEVIRVTKK KKIGKKKKPR SDEEASPLHP ASTQHTCARR BACU005673/1-1021 HTPDLPDTCT ELEVIRVTKK KKIGKKKKPR SDEEASPLHP ASTQHTCARR ENSTTRP00000010851/1-1020 HTPDLPDTCT ELEVIRVTKK KKIGKKKKPR SDEEASPLHP ASTQHTCARR 401 450 ENSP00000364956/1-1019 GDGDSRNGSP SLGRDSPDTM LASPQEEGEG PSSTTESSER SEP---GLLI ENSBTAP00000024919/1-1013 GNGDPVVSSP GPGQGSPDTT LASPPQEGQG PGSTVEGSER SEPGQVGLLI bmy_09920T0/1-1059 GSGDTLVSSP GPGRVSPDKT LASAREETEG PSSTAEGSER SEPGQVGLLI BACU005673/1-1021 GSGDTLVSSP GPGRVSPDKT LASAREETEG PGGTAEGSER AGPGQVGLLI ENSTTRP00000010851/1-1020 GSGDTLVSSP GPGRVSPDKT LASAGEETEG PGSTAEGSER SEPGQVGLLI 451 500 ENSP00000364956/1-1019 PEMKDTSMER LGQPLSKVID QLNGQLDPST WCSRAEPPDQ SFRTGSPGDA ENSBTAP00000024919/1-1013 PEMKDTSMER VGQPLSKVID QLNGQLDPAT WRSHVEPPDQ SFRTGSPGDA bmy_09920T0/1-1059 PEMKDTSMEC LGQPLSKVID QLNGQLDPSA WCSHVEPPNQ SFRTGSPGDA BACU005673/1-1021 PEMKDTSMER LGQPLSKVID QLNGQLDPSA WCSHVEPPNQ SFRTGSPGDA ENSTTRP00000010851/1-1020 PEMKDTSMEC LGQPLSKVID QLHGQLDPST WCSHVEPPNQ SFRTGSPGDA 501 550 ENSP00000364956/1-1019 PERPPLCDFS EGLSAPMDFY RFTVESPSTV TSGGGHHDPA GLGQPLHVPS ENSBTAP00000024919/1-1013 PERPPFCDFS EGLPAPMDFY RFTVESPSAV TSGGGHHDPA GPGQPLHVPG bmy_09920T0/1-1059 PERPPFCDFS EGLPAPMDFY RFTVESPSAV ASGGGHHDPA GPGQPLHVPG BACU005673/1-1021 PERPPFCDFS EGLPAPMDFY RFTVESPSTV ASGGGHHDPA GPGQPLHVPG ENSTTRP00000010851/1-1020 PERPPFCDFS EGLPAPMDFY RFTVESPSTV ASGGGHHDPA GPGQPLHVPG 551 600 ENSP00000364956/1-1019 SPEAAGQEEE GGG-GEGQTP RPLEDT---- -TREAQELEA QLSLVREGPV ENSBTAP00000024919/1-1013 SPAAAGQEEA GGGGGPGQTP RPLEDTPGEA QKPEAQELDA QLPQDGEGLE bmy_09920T0/1-1059 SPAAAGQEEE GGGRGPGQAP RPLEDTPGET QEPEAQELET RLPLVGEGPV BACU005673/1-1021 SPAAAGQEEE GGGRGPGQAP RPLEDTPGET REPEAQELET RLPLVGEGPV ENSTTRP00000010851/1-1020 SPAAAGQEEE GGGRGPGQAP RPLEDTPGET QEPEAQELET RLPLVGEGPV 601 650 ENSP00000364956/1-1019 SEPEPGTQEV LCQLKRDQPS PCLSSAEDSG VDEGQGSPSE MVHSSEFRVD ENSBTAP00000024919/1-1013 PE--PGTQEA LCRLKGDQPS PCLSSAEDSG VEEGQGSPSE MTHSAEFRVD bmy_09920T0/1-1059 SEQGPGTQET LCRLKRDQPS PCLSSAEDSG VDEGQGSPSE MSHSAEFRVD BACU005673/1-1021 PEREPGAQET LCRLKRDQPS PCLSSAEDSG VDEGQGRPSE MSHSAEFRVD ENSTTRP00000010851/1-1020 PEQEPGTQET LCQLKRDQPS PCLSSAEDSG VDEGQGSPSE MSHSAEFRVD 651 700 ENSP00000364956/1-1019 NNHLLLLMIH VFRENEEQLF KMIRMSTGHM EGNLQLLYVL LTDCYVYLLR ENSBTAP00000024919/1-1013 NNHLLLLMIH VFRENEEQLF RMIRMSTGHM EGNLQLLYVL LTDCYVYLLR bmy_09920T0/1-1059 NNHLLLLMIH VFRENEEQLF KMIRMSTGHM EGNLQLLYVL LTDCYVYLLR BACU005673/1-1021 NNHLLLLMIH VFRENEEQLF KMIRMSTGHM EGNLQLLYVL LTDCYVYLLR ENSTTRP00000010851/1-1020 NNHLLLLMIH VFRENEEQLF RMIRMSTGHM EGNLQLLYVL LTDCYVYLLR 701 750 ENSP00000364956/1-1019 KGATEKPYLV EEAVSYNELD YVSVGLDQQT VKLVCTNRRK QFLLDTADVA ENSBTAP00000024919/1-1013 KGATEKPYLV EEAVSYNELD YVSVGLDQQT VKLVCTNRRK QFLLDTADVA bmy_09920T0/1-1059 KGATEKPYLV EEAVSYNELD YVSVGLDQQT VKLVCTNRRK QFLLDTADVA BACU005673/1-1021 KGATEKPYLV EEAVSYNELD YVSVGLDQQT VKLVCTNRRK QFLLDTADVA ENSTTRP00000010851/1-1020 KGATEKPYLV EEAVSYNELD YVSVGLDQQT VKLVCTNRRK QFLLDTADVA 751 800 ENSP00000364956/1-1019 LAEFFLASLK SAMIKGCREP PYPSILTDAT MEKLALAKFV AQESKCEASA ENSBTAP00000024919/1-1013 LAEFFLASLK SAMIKGCREP PYPSILTDAT MEKLALAKFV AQESKCEATA bmy_09920T0/1-1059 LAEFFLASLK SAMIKGCREP PYPSVLTDAT MEKLALAKFV AQESKCEATT BACU005673/1-1021 LAEFFLASLK SAMIKGCREP PYPSVLTDAT MEKLALAKFV AQESKCEATT ENSTTRP00000010851/1-1020 LAEFFLASLK SAMIKGCREP PYPSVLTDAT MEKLALAKFV AQESKCEATT 801 850 ENSP00000364956/1-1019 VTVRFYGLVH WEDPTDESLG PTPCHCSPPE GTITKEGMLH YKAGTSYLGK ENSBTAP00000024919/1-1013 VTVRFYGLVH WEDPQDEFLG PTPCHCSPPE GTITKEGMLH YKAGTSYLGK bmy_09920T0/1-1059 VTVRFYGLVH WEDPQDEPLG RVPCHCSPPE GAITKEGMLH YKAGTSYLGK BACU005673/1-1021 VTVRFYGLVH WEDPQDESLG RTPCHCSPPE GAITKEGMLH YKAGTSYLGK ENSTTRP00000010851/1-1020 VSVCFYGLVH WQDPQDESLG RIPCHCSPPE GAVTKEGMLH YKAGTSYLGK 851 900 ENSP00000364956/1-1019 EHWKTCFVVL SNGILYQYPD RTDVIPLLSV NMGGEQCGGC RRANTTDRPH ENSBTAP00000024919/1-1013 EHWKTCFVVL SNGILYQYPD RTDVTPLLSV NMGGEQCGGC RRSNTTDRPH bmy_09920T0/1-1059 EHWKTCFVVL SNGILYQYPD RTDVTPLLSV NMGGEQCGGC RRSSTTDRPH BACU005673/1-1021 EHWKTCFVVL SNGILYQYPD RTDVTPLLSV NMGGEQCGGC RRSSTTDRPH ENSTTRP00000010851/1-1020 EHWKTCFVVL SNGILYQYPD RTDVTPLLSV NMGGEQCGGC RRSSTTDRPH 901 950 ENSP00000364956/1-1019 AFQVILSDRP CLELSAESEA EMAEWMQHLC QAVSKGVIPQ GVAPSPCIPC ENSBTAP00000024919/1-1013 AFQVILADRP CLELSADSEA EMADWMQHLC QAVSKGVIPQ GVAPSPCIPC bmy_09920T0/1-1059 AFQVILADRP CLELSAGSEA EMADWMQHLC QAVSKGVIPQ GVTPSPCIPC BACU005673/1-1021 AFQVILADRP CLELSAGSEA EMADWMQHLC QAVSKGVIPQ GVTPSPCIPC ENSTTRP00000010851/1-1020 AFQVILADRP CLELSAGSEA EMADWMQHLC QAVSKGVIPQ GVTPSPCIPC 951 1000 ENSP00000364956/1-1019 CLVLTDDRLF TCHEDCQTSF FRSLGTAKLG DISAVSTEPG KEYCVLEFSQ ENSBTAP00000024919/1-1013 CLVITDDRLF TCHEDCQTSF FRSLGTAKLA DISAVSTEPG KEYCLLEFSQ bmy_09920T0/1-1059 CLVITDDRLF TCHEDCQTSF FRSLGTAQLA DISAVSTEPG KEYCVLDFSQ BACU005673/1-1021 CLVITDDRLF TCHEDCQTSF FRSLGAAQLA DISAVSTEPG KEYCVLDFSQ ENSTTRP00000010851/1-1020 CLVITDDRLF TCHEDCQTSF FRSLGTAQLA DISTVSTEPG KEYCVLEFSQ 1001 1050 ENSP00000364956/1-1019 DSQQLLPPWV IYLSCTSELD RLLSALNSGW KTIYQVDLPH TAIQEASNKK ENSBTAP00000024919/1-1013 DSAQPLPPWV VYLSCTPELD RFLSALNSGW KTIYQVDLPH KAIQEASK-K bmy_09920T0/1-1059 DSQQPLPPWV IYLSCTSELD RFLSALNSGW KTIYQVDLPR KAIQEASN-K BACU005673/1-1021 DSQQPLPPWV IYLSCTSELD RFLSALNSGW KTIYQVDLPR KAIQEASN-K ENSTTRP00000010851/1-1020 DSQQPLPPWV IYLSCTSELD RFLSALNSGW KTIYQVDLPR KAIQEASNKK 1051 1100 ENSP00000364956/1-1019 KFEDALSLIH SAWQRSDSLC RGRASRDPWC ENSBTAP00000024919/1-1013 KFEDALSLIH SAWQRSDSLC RGRASRDPWC bmy_09920T0/1-1059 KFEDALSLIH SAWQRSDSLC RGRASRDPWC BACU005673/1-1021 KFEDALSLIH SAWQRSDSLC RGRASRDPWC ENSTTRP00000010851/1-1020 KFEDALSLIH SAWQRSDSLC RGRASRDPWC