KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:19 2014 Check: 00 .. Name: ENSTTRP00000010839/1-173 Len: 330 Check: 3449 Weight: 1.00 Name: ENSP00000294454/1-304 Len: 330 Check: 39 Weight: 1.00 Name: ENSBTAP00000024921/1-304 Len: 330 Check: 9490 Weight: 1.00 Name: bmy_09919T0/1-330 Len: 330 Check: 9884 Weight: 1.00 Name: BACU005674/1-304 Len: 330 Check: 766 Weight: 1.00 // 1 50 ENSTTRP00000010839/1-173 ---------- ---------- ---------- ---------- ---------- ENSP00000294454/1-304 ---------- ----METVPP AVDLVLGASA CCLACVFTNP LEVVKTRLQL ENSBTAP00000024921/1-304 ---------- ----METVPP AVDLVLGASA CCLACVFTNP LEVVKTRLQL bmy_09919T0/1-330 MPLTRAQPAP GPEAMETVAP AVDLVLGASA CCLACVFTNP LEVVKTRLQL BACU005674/1-304 ---------- ----METVAP AVDLVLGASA CCLACVFTNP LEVVKTRLQL 51 100 ENSTTRP00000010839/1-173 ---------- ---------- ---------- ---------- ---------- ENSP00000294454/1-304 QGELQARGTY PRPYHGFIAS VAAVARADGL WGLQKGLAAG LLYQGLMNGV ENSBTAP00000024921/1-304 QGELQKRGTY PRLYRGFVAS VVAVVRADGL CGLQKGLAAG LLYQGLMNGV bmy_09919T0/1-330 QGELQARGTY PRHYRGFVAS VIAVARADGL CGLQKGLAAG LLYQGLMNGV BACU005674/1-304 QGELQARGTY PRHYRGFVAS VVAVARADGL CGLQKGLAAG LLYQGLMNGV 101 150 ENSTTRP00000010839/1-173 ---------- ---------- ---------- ---------- VKTQLQAQTV ENSP00000294454/1-304 RFYCYSLACQ AGLTQQPGGT VVAGAVAGAL GAFVGSPAYL IKTQLQAQTV ENSBTAP00000024921/1-304 RFYCYSLACQ AGLSQQPGGT VVAGAVAGAL GAFVGSPAYL VKTQLQAQTV bmy_09919T0/1-330 RFYCYSLACQ AGLAQQPGGT MVAGAVAGAL GAFVGSPAYL VKTQLQAQTV BACU005674/1-304 RFYCYSLACQ AGLAQQPGGT VVAGAVAGAL GAFVGSPAYL VKTQLQAQTV 151 200 ENSTTRP00000010839/1-173 AAMAVGHQHP HQ-------- ----NVLDAL GTIWRQRGLA GLWQGVGGAV ENSP00000294454/1-304 AAVAVGHQHN HQ-------- ----TVLGAL ETIWRQQGLL GLWQGVGGAV ENSBTAP00000024921/1-304 AAMAVGHQHH HE-------- ----SLLGAL ETIWRQQGLA GLWRGVGGAV bmy_09919T0/1-330 AAMAVGHQHP HQVGTVTPRS FPGWNVLDAL GTIWRQRGLA GLWQGVGGAV BACU005674/1-304 AAMAVGHQHP HQ-------- ----NVLDAL GTIWRQRGLV GLWQGVGGAV 201 250 ENSTTRP00000010839/1-173 PRVMVGSAAQ LATFASAKAW VQEQQWLPED SWLVALAGGM ISSVAVVTVM ENSP00000294454/1-304 PRVMVGSAAQ LATFASAKAW VQKQQWLPED SWLVALAGGM ISSIAVVVVM ENSBTAP00000024921/1-304 PRVMVGSAAQ LATFASAKAW VQERQWLPED SWLVALAGGM ISSIAVVAVM bmy_09919T0/1-330 PRVMVGSAAQ LATFASAKAW VQEQQWLPED SWLVALAGGM ISSVAVVTVM BACU005674/1-304 PRVMVGSAAQ LATFASAKAW VQEQQWLPED SWLVALAGGM ISSVAVVTVM 251 300 ENSTTRP00000010839/1-173 TPFDVVSTRL YNQPVDGAGR XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000294454/1-304 TPFDVVSTRL YNQPVDTAGR GQLYGGLTDC MVKIWRQEGP LALYKGLGPA ENSBTAP00000024921/1-304 TPFDVVSTRL YNQPVDGAGR GKLYGGLTDC LVKIWRQEGP LALYKGLGPV bmy_09919T0/1-330 TPFDVVSTRL YNQPVDGAGR GQLYGGLADC LVKIWRQEGP LALYKGLGPT BACU005674/1-304 TPFDVVSTRL YNQPVDGAGR GRLYGGLADC LVKIWRQEGP LALYKGLGPT 301 350 ENSTTRP00000010839/1-173 XXXXGPHTIL SML-WDERK- -AGR--QHGS ENSP00000294454/1-304 YLRLGPHTIL SMLFWDELRK LAGRAQHKGT ENSBTAP00000024921/1-304 YLRLGPHTIL SMLFWDELRK LAGWGQHQGS bmy_09919T0/1-330 YLRLGPHTIL SMLFWDELRK LAGRAQHQGS BACU005674/1-304 YLRLGPHTIL SMLFWDELRK LAGRAQHQGS