KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:20 2014 Check: 00 .. Name: ENSP00000416387/1-374 Len: 390 Check: 4194 Weight: 1.00 Name: bmy_09917T0/1-334 Len: 390 Check: 6034 Weight: 1.00 Name: ENSBTAP00000024926/1-378 Len: 390 Check: 5973 Weight: 1.00 Name: BACU005676/1-374 Len: 390 Check: 5472 Weight: 1.00 Name: ENSTTRP00000010828/1-375 Len: 390 Check: 9633 Weight: 1.00 // 1 50 ENSP00000416387/1-374 MASKPEKRVA SSVFITLAPP RRDVAVAEEV RQAVCEARRG RPWEAPAPMK bmy_09917T0/1-334 MASKPEKRVA SSVFITLAPP RRDEAVVEEV RRAACEARPG CPRASPAPTK ENSBTAP00000024926/1-378 MASKPEKRVA SSVFITLVPP RRDEAVVEEV RRAACEAWPG RPWES-APTK BACU005676/1-374 MASKPEKRVA SSVFITLAPP RRDEAVAEEV RRAACEARPG CPRASPAPTK ENSTTRP00000010828/1-375 MASKPEKRVA SSVFITLAPP RRDEAVVEEV RRAACEARPG CPRESPAPTK 51 100 ENSP00000416387/1-374 TPEAGLAGRP SPWTTPGRAA ATVPAAPMQL FNGGCPPPPP VLDGEDVLPD bmy_09917T0/1-334 APGAGSAGRL RSWTPPGRAA APVPAVPPQL SSGGCSLPPP PLDGEDALPD ENSBTAP00000024926/1-378 APGAGSVGKL RSWMPPGRAA APGPAVPPQL SNGGCSLPPP PLDVDDALPD BACU005676/1-374 APGAGSAGRL RSWTPPSRAA APVPAVPPQL SSGGCSLPPP PLDGEDALPD ENSTTRP00000010828/1-375 APGAGSAGRL RSWTPPSRAA APVPAVPHQL SSGGCSLPPP PLDGKDTLPD 101 150 ENSP00000416387/1-374 LDLL-PPPPP PPPVLLPSEE EAPAPMGASL IADLEQLHLS PPPPPPQAPA bmy_09917T0/1-334 LDLL-PPPPP PPPVYLPPDE EPPAPMGASL ISDLEQL--- -PPPPPQPLV ENSBTAP00000024926/1-378 LDLLPPPPPP PAADLPPPDE EPHSAMGASL ISDLEQLHLP PPPPPPQALV BACU005676/1-374 LDLL-PPPPP PPPVYLPPDE EPPAPMGASL ISDLEQL--- -PPPPPQPLV ENSTTRP00000010828/1-375 LDLLPPPPPP PPPVYLPPDE EPPAPMGVSL ISDLEQL--- -PPPPPQPLV 151 200 ENSP00000416387/1-374 EGPSVQPGP- -LRPMEEELP PPPAEPV--- EKGASTDICA FCHKTVSPRE bmy_09917T0/1-334 EGPPLQPRPN HLRPTEEELP PPPEELVGFP EREASTDRV- -------PSR ENSBTAP00000024926/1-378 EGPPLQPRPS HLKPAEEELP PPPEEPVSFP EREASTDICA FCHKTVSPRE BACU005676/1-374 EGPPLPPRPS HLRPTEEELP PPPEEPVGFP EREASTDVCA FCHKTVSPRE ENSTTRP00000010828/1-375 EGPPLQPRPN HLRPTEEELP PPPEEPVGFP EREASTDVCA FCHKTVSPQE 201 250 ENSP00000416387/1-374 LAVEAMKRQY HAQCFTCRTC RRQLAGQSFY QKDGRPLCEP CYQDTLERCG bmy_09917T0/1-334 AGCGG----- HEEAIPCPV- ---LHVPYLP PPAGRA---- --EDTLEKCG ENSBTAP00000024926/1-378 LAVEAMKRQY HAQCFTCRVC RRQLAGQSFY QKDGRPLCEP CYQDTLEKCG BACU005676/1-374 LAVEAMKRQY HAQCFTCRIC RRQLAGQSFY QKDGRPLCEP CYQDTLEKCG ENSTTRP00000010828/1-375 LAVEAMNRQY HAQCFTCRIC RRQLAGQSFY QKDGRPLCEP CYQDTLEKCG 251 300 ENSP00000416387/1-374 KCGEVVRDHI IRALGQAFHP SCFTCVTCAR CIGDESFALG SQNEVYCLDD bmy_09917T0/1-334 RCGEVVREHI IRALGQAFHP TCFTCVTCAR CIGDESFALD SQNEVYCLDD ENSBTAP00000024926/1-378 KCGEVVREHI IRALGQAFHP SCFTCVTCAR RIGDESFALD SQNEVYCLDD BACU005676/1-374 RCGEVVREHI IRALGQAFHP TCFTCVTCAR CIGDESFALD SQNEVYCLDD ENSTTRP00000010828/1-375 RCGEVVREHI IRALDQAFHP TCFTCVTCAR CIGDESFALD SQNEVYCLDD 301 350 ENSP00000416387/1-374 FYRYEKGLCT ----GWGAGT GRDPSRVKEL --SLSPGCWA RVSCLLVYYK bmy_09917T0/1-334 FYRKFAPVCS ICENPIIPRD GKDAFKIE-- ---------- -----ILLSV ENSBTAP00000024926/1-378 FYRKFAPVCS ICENPIIPRD GKDAFKIECM GRNFHENCYR CEDCRVLLSV BACU005676/1-374 FYRKFAPVCS ICENPIIPRD GKDAFKIECM GRNFHENCYR CEDCRILLSV ENSTTRP00000010828/1-375 FYRKFAPVCS ICENPIIPRD GKDAFKIECM GRNFHENCYR CEDCRILLSV 351 400 ENSP00000416387/1-374 EYYRAGLGAV AHA--CNPST LGGRGGWITR SGDRDHPG-- bmy_09917T0/1-334 EPTDQGCYPL NNRLFCKPCH V--------- --KRSAAGCC ENSBTAP00000024926/1-378 EPTDQGCYPL NNRLFCKPCH V--------- --KRSAAGCC BACU005676/1-374 EPTDQGCYPL NNRLFCKPCH V--------- --KRSAAGCC ENSTTRP00000010828/1-375 EPTDQGCYPL NNRLFCKPCH V--------- --KRSAAGCC