KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:21 2014 Check: 00 .. Name: bmy_10286T0/1-389 Len: 698 Check: 1447 Weight: 1.00 Name: ENSP00000417354/1-696 Len: 698 Check: 1646 Weight: 1.00 Name: ENSBTAP00000024928/1-695 Len: 698 Check: 7758 Weight: 1.00 Name: ENSTTRP00000007485/1-615 Len: 698 Check: 8068 Weight: 1.00 Name: BACU017836/1-693 Len: 698 Check: 5876 Weight: 1.00 // 1 50 bmy_10286T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSP00000417354/1-696 MGNGMCSRKQ KRIFQTLLLL TVVFGFLYGA MLYYELQTQL RKAEAVALKY ENSBTAP00000024928/1-695 MGNGMCSRKQ KRIFQTLLLL TVVFGFLYGA MLYYELQTQL RKAEAVALKY ENSTTRP00000007485/1-615 MGNGMCSRKQ KRIFQTLLLL TVVFGFLYGA MLYYELQTQL RKAEAVALKY BACU017836/1-693 MGNGMCSRKQ KRIFQTLLLL TVVFGFLYGA MLYYELQTQL RKAEAVALKY 51 100 bmy_10286T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSP00000417354/1-696 QQHQESLSAQ LQVVYEHRSR LEKSLQKERL EHKKAKEDFL VYKLEAQETL ENSBTAP00000024928/1-695 QQHQESLSAQ LQVVYEHRSR LEKSLQKERL EHKKAKEDFL VYKLEAQETL ENSTTRP00000007485/1-615 QQHQESLSAQ LQVVYEHRSR LEKSLQKERL EHKKAKEDFL VYKLEAQETL BACU017836/1-693 QQHQESLSAQ LQVVYEHRSR LEKSLQKERL EHKKAKEDFL VYKLEAQETL 101 150 bmy_10286T0/1-389 ----MPTN-- ---------- ---------- ---------- --GED----- ENSP00000417354/1-696 NKGRQDSNSR YSALNVQHQM LKSQHEELKK QHSDLEEEHR KQGEDFSRTF ENSBTAP00000024928/1-695 NKGRQDSNSR YSALNVQHQM LKSQHEELKK QHSDLEEEHR RQGEDFSRTF ENSTTRP00000007485/1-615 NKGRQDSNSR YSALNVQHQM LKSQHEELKK QHSDLEEEHR RQGEDFSRTF BACU017836/1-693 NKGRQDSNSR YSALNVQHQM LKSQHEELKK QHSDLEEEHR KQGEDFSRTF 151 200 bmy_10286T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSP00000417354/1-696 NDHKQKYLQL QQEKEQELSK LKETVYNLRE ENRQLRKAHQ DIHTQLQDVK ENSBTAP00000024928/1-695 NDHKQRYLQL QQEKEQELSK LKETVYNLRE ENRQLRRAHQ DMHTQLQDVK ENSTTRP00000007485/1-615 NDHKQRYLQL QQEKEQELSK LKESVYNLRE ENRQLRRAHQ DMHTQLQDVK BACU017836/1-693 NDHKQRYLQL QQEKEQELSK LKESVYNLRE ENRQLRRAHQ DMHTQLQDVK 201 250 bmy_10286T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSP00000417354/1-696 QQHKNLLSEH EQLVVTLEDH KSALAAAQTQ VAEYKQLKDT LNRIPSLRKP ENSBTAP00000024928/1-695 QQHKNLLSEH EQLVVTLEDH KSALAAAQTQ VAEYKQLKDT LNRIPSFRKP ENSTTRP00000007485/1-615 QQHKNLLSEH EQLVVTLEDH KSALAAAQTQ VAEYKQLKDT LNRIPSFRKP BACU017836/1-693 QQHKNLLSEH EQLVVTLEDH KSALAAAQTQ VAEYKQLKDT LNRIPSFRKP 251 300 bmy_10286T0/1-389 ---------- ---------- ---QLPKEAR G---DSERW- ---------- ENSP00000417354/1-696 DPAEQQNVTQ VAHSPQGYNT AREKPTREVQ EVSRNNDVWQ NHEAVPGRAE ENSBTAP00000024928/1-695 EQTEQQNITQ VAHSPQGDST ARDKSPGEPR EVSRNSEVWQ NHEAAPGRTE ENSTTRP00000007485/1-615 ERTEQQNITQ VAHSPQGDSA TRDKLPGEPR EVSRNSEVWQ NHEAVPGRTE BACU017836/1-693 EPAEQQNVTQ VAHSPQGVSA TRDKLPGELR EVSRNGQVWQ NREAVPGRTE 301 350 bmy_10286T0/1-389 ---------- ETGVESSCGW LWT-VMTVDL TDRCILQAAR RAEE------ ENSP00000417354/1-696 DTKLYAPTHK EAEFQAPPEP IQQEVERREP EEHQVEEEHR KALEEEEMEQ ENSBTAP00000024928/1-695 ETKPYPSTQK EAELQAPAEL TRQEAGPKEP EERQVEEEHR RALEEEAMEQ ENSTTRP00000007485/1-615 ETEPYPPTQK EAGFQAPAEL TRREAGREEP EGRPVEEEHR RALEEEAMEQ BACU017836/1-693 EAKPYPPTQK EAGSQAPAGL TRQEAGGGEP EERQVEEEHR RALEEEAMEQ 351 400 bmy_10286T0/1-389 ---AQRLKER QEALPQQRLQ GPLPHQHXLT Q-HQLSAPQV ----YPSGRP ENSP00000417354/1-696 VGQAEHLEEE HDPSPEEQ-D REWKEQHEQR EAANLLEGHA RAEVYPSAKP ENSBTAP00000024928/1-695 VGRPEHLEEE HDPSPEEQ-D REWTEQRERK E-ARLAAGEV HAEVHPSAKP ENSTTRP00000007485/1-615 VGQAEHLAEE HDPSLEEQRH REWAERRERK E-ARLLEGQA RAGVYPSGKP BACU017836/1-693 VGRAERLEEE HDPPPEEQRG REWTERREQK E-ARLPQGQA RAEVYPSGRP 401 450 bmy_10286T0/1-389 VAKFPSPYEE QLQQQRLAAR RAEEAQRLKE RQEALPQQRL QGPLPHQH-- ENSP00000417354/1-696 MIKFQSPYEE QLEQQRLAVQ QVEEAQQLRE HQEALHQQRL QGHLLRQQEQ ENSBTAP00000024928/1-695 VTRLQSPYEE QLEQQRLAVQ RAEEAQRLRE EQEALHQQRL QGHLLRQH-Q ENSTTRP00000007485/1-615 VAKFQSPYEE ---QQRLAVR RVEEAQRPKE RHEAPPQQRL QGPLPHQH-- BACU017836/1-693 VAKFPSPYEE RLQQQRLAAR RAEEAQRLKE RQEAPPQQRL QGPPPQQH-- 451 500 bmy_10286T0/1-389 RP--LAGETA QQRQAGLAQG RPQRPEQTRQ QARYDAVDND IVQGAEDQGI ENSP00000417354/1-696 QQQQVAREMA LQRQAELEEG RPQHQEQLRQ QAHYDAMDND IVQGAEDQGI ENSBTAP00000024928/1-695 QQQLLARETA RQQQDGLQEG RLQRPEQPRQ QARYDAVDND IVQGAEDQGI ENSTTRP00000007485/1-615 QPQLLARETA QQRQAGLAEG RPQRPEQTRQ QARYDAVDND VVQGAEDQGV BACU017836/1-693 RP--LAAETA QQRQAGLAQG RPQRPEHARQ QARYDAVDND IVQGAEDQGI 501 550 bmy_10286T0/1-389 QEEEGGAYER DNQHQDEAEE DPENGHELQE QGPHEADPES EADRGAVEDI ENSP00000417354/1-696 QGEE-GAYER DNQHQDEAEG DPGNRHEPRE QGPREADPES EADRAAVEDI ENSBTAP00000024928/1-695 QEEEGGAYER DNQHQDEAEE DPENGHELQE QGPHEADPES EGDRAAVEDI ENSTTRP00000007485/1-615 QEEE-GAYER DNQHQDEAEE DPENGHELQE QGPHEADPES EAGRAAVEDI BACU017836/1-693 QEEEGGAYER DNQHQDEAEE DPENGHELQE QGPPEADPES EADRAAVEDI 551 600 bmy_10286T0/1-389 NPADDPNNQG EDEFEEAGQV REENLPDENE EQKQSHQKQE NAEVEEHLVM ENSP00000417354/1-696 NPADDPNNQG EDEFEEAEQV REENLPDENE EQKQSNQKQE NTEVEEHLVM ENSBTAP00000024928/1-695 NPADDPNNQG EDEFEEAGQV REENLPDENE EQKQSHQKQQ NAEMEEHLVM ENSTTRP00000007485/1-615 NPADDPNNQG EDEFEEAGQV REENLPDENE EQKQSHQKQG NAEMEEHLVM BACU017836/1-693 NPADDPNNQG EDEFEEAGQV REENLPDENE EQKQSHQKQE NAEVEEHLVM 601 650 bmy_10286T0/1-389 AGNPDQQEDN VDDQYQEEGE EEVQEDLTEE KKRELEHNAE ETYGENDENA ENSP00000417354/1-696 AGNPDQQEDN VDEQYQEEAE EEVQEDLTEE KKRELEHNAE ETYGENDENT ENSBTAP00000024928/1-695 AGNPDQQEDN VDEQYQEEGE EEVQEDLTEE KKRELEHNAE ETYGENDENA ENSTTRP00000007485/1-615 AGNPDQQEDN VDDQYQEEGE EE-------- ---------- ---------- BACU017836/1-693 AGNPDQQEDN VDDQYQEEGE EEVQEDLTEE KKRELEHNAE ETYGENDENA 651 700 bmy_10286T0/1-389 DEKNNDGEEQ EVRDDNHPKG REDHYEEEEE EEEDGAAAAE KSRQRAEM ENSP00000417354/1-696 DDKNNDGEEQ EVRDDNRPKG REEHYEEEEE EEEDGAAVAE KSHRRAEM ENSBTAP00000024928/1-695 DEKNNEGEEQ EVRDDNHPKG REEHYEEEDD EEEDGAAAAE KSRQRAEM ENSTTRP00000007485/1-615 ---------- ---------- ---------- ---------- -------- BACU017836/1-693 DEKNNDGEEQ EVRDDNHPKG REDHYEEEEE EEEDGAAAAE KSRQRAEM