KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:28 2014 Check: 00 .. Name: BACU014759/1-120 Len: 463 Check: 4096 Weight: 1.00 Name: ENSTTRP00000008966/1-343 Len: 463 Check: 3995 Weight: 1.00 Name: ENSBTAP00000024937/1-174 Len: 463 Check: 993 Weight: 1.00 Name: ENSP00000217195/1-199 Len: 463 Check: 7319 Weight: 1.00 Name: bmy_07682T0/1-251 Len: 463 Check: 4946 Weight: 1.00 // 1 50 BACU014759/1-120 MMPSRTNLA- ---------- ---------T GIPSSKVKYS RLSSTDDGYI ENSTTRP00000008966/1-343 ---------- ---------- ---------- --NKPRVRSI RFATGHDA-- ENSBTAP00000024937/1-174 MAAANK---- ---------- ---------- -GNKSRVRSI RFATSHDA-- ENSP00000217195/1-199 MAAANKGKCL PGVVGLAQAL PVGPGRRAIA AGNKPRVRSI RFAAGHDA-- bmy_07682T0/1-251 MAAANK---- ---------- ---------- -GNKPRVRSI RFATGHDA-- 51 100 BACU014759/1-120 DLQFKKSPPK IPYKAIALAT VLFLI----G AFLIIIGSL- LLAGY----- ENSTTRP00000008966/1-343 ----EGSQSH VHFDEKLHDS VVMVTQESDS SFLVK-GFLK ILHRYEITFT ENSBTAP00000024937/1-174 ----ESSQSH VHFDEKLHDS VVMVTQESDS SFLVKVGFLK ILHRYEITFT ENSP00000217195/1-199 ----EGSHSH VHFDEKLHDS VVMVTQESDS SFLVKVGFLK ILHRYEITFT bmy_07682T0/1-251 ----EGSQSH VHFDEKLHDS VVMVTQESDS SFLVKVGFLK ILHRYEITFT 101 150 BACU014759/1-120 ------ISKG GADRAVPVLI IGILVFLP-- -GF------- ---------- ENSTTRP00000008966/1-343 LPV--RLSKE VREAPVPSLH LKLLSVMPIP EG-------- ---------- ENSBTAP00000024937/1-174 LPPVHRLSKD VRETPVPSLH LKLLSVMPIP EG-------- ---------- ENSP00000217195/1-199 LPPVHRLSKD VREAPVPSLH LKLLSVVPVP EG-------- ---------- bmy_07682T0/1-251 LPPVRRLSKE VREAPVPSLH LKLLSVMPIP EGAYPAWGAG SLPSSSRAWV 151 200 BACU014759/1-120 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008966/1-343 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024937/1-174 ---------- ---------- ---------- ---------- ---------- ENSP00000217195/1-199 ---------- ---------- ---------- ---------- ---------- bmy_07682T0/1-251 QRHVELNEEW EVPKACVPSP GGRVLGHPCS SGGLGGGWGP VSAGGWGREA 201 250 BACU014759/1-120 ---------Y HLRIAYYASK ---------- ---------- ---------- ENSTTRP00000008966/1-343 ---------Y SIKCEYSAHK EGVLKEEMLL ACEGGTGTCV RVMVQARVMG ENSBTAP00000024937/1-174 ---------Y SVKCEYSAHK EGVLKEEMLL ACEGGSDTCV RVIVQARVM- ENSP00000217195/1-199 ---------Y SVKCEYSAHK EGVLKEEILL ACEGGTGTCV RVTVQARVM- bmy_07682T0/1-251 AEVLIARAGY SIKCEYSAHK EGVLKEEMLL ACEGGTGTCV RVMVQARVM- 251 300 BACU014759/1-120 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008966/1-343 ESSRPLARGG RHQLGCKGFH PPSEKGILAR PPQPPWWTDT TAHPCCMVSS ENSBTAP00000024937/1-174 ---------D RHH------- ---------- ---------- ---------- ENSP00000217195/1-199 ---------D RHH------- ---------- ---------- ---------- bmy_07682T0/1-251 ---------D RHH------- ---------- ---------- ---------- 301 350 BACU014759/1-120 ---------- ---GY----- ---------- ---------- ---RGYSYD- ENSTTRP00000008966/1-343 AWVLSNTTQS TVTGTASTEA LAPTCLGPLS LKPHLVSSC- CVMVWLPHPS ENSBTAP00000024937/1-174 ---------- ---GT----- ---------- --PMLLDGVR CVGAELEYDS ENSP00000217195/1-199 ---------- ---GT----- ---------- --PMLLDGVK CVGAELEYDS bmy_07682T0/1-251 ---------- ---GT----- ---------- --PMLLDGVK CVGAELEYDS 351 400 BACU014759/1-120 ---DI----- ---------- ---------- ---------- ---------- ENSTTRP00000008966/1-343 QGWAWRWRGL AHTSHLLCHL PASPASSSPT SSSLCASVSC WKKWAEPPRR ENSBTAP00000024937/1-174 EHSDW----- ---------- ---------- ---------- ---------- ENSP00000217195/1-199 EHSDW----- ---------- ---------- ---------- ---------- bmy_07682T0/1-251 EHSDW----- ---------- ---------- ---------- ---------- 401 450 BACU014759/1-120 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008966/1-343 LSEGMERAWG GFPTPHPKPG LPGPRRGGSW LCGVVPPLLL LSSCFSQLSC ENSBTAP00000024937/1-174 ---------- ---------- ---------- ---------- ---------- ENSP00000217195/1-199 ---------- ---------- ---------- ---------- ---------- bmy_07682T0/1-251 ---------- ---------- ---------- ---------- ---------- 451 500 BACU014759/1-120 --------PD FDD ENSTTRP00000008966/1-343 PSLFPTAVHG EE- ENSBTAP00000024937/1-174 --------RG FD- ENSP00000217195/1-199 --------HG FD- bmy_07682T0/1-251 --------HG FD-