KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:29 2014 Check: 00 .. Name: ENSP00000359385/1-594 Len: 595 Check: 6806 Weight: 1.00 Name: ENSBTAP00000024943/1-592 Len: 595 Check: 2271 Weight: 1.00 Name: BACU002816/1-592 Len: 595 Check: 3221 Weight: 1.00 Name: ENSTTRP00000013689/1-589 Len: 595 Check: 5849 Weight: 1.00 Name: bmy_22003T0/1-308 Len: 595 Check: 2978 Weight: 1.00 // 1 50 ENSP00000359385/1-594 MAVEELQSII KRCQILEEQD FKEEDFGLFQ LAGQRCIEEG HTDQLLEIIQ ENSBTAP00000024943/1-592 MAVEELQSII KRCQILEEQD FKEEDFGLFQ LAGQRCIDEG HIDQLLEIIQ BACU002816/1-592 MAVEELHSII KRCQILEEQD FKEEDFGLFQ LAGQRCIDEG HVDQLLEIIQ ENSTTRP00000013689/1-589 MAVEELHSII KRCQILEEQD FKEEDFGLFQ LAGQRCIDEG HIDQLLEIIQ bmy_22003T0/1-308 MAVEELHSII KRCQILEEQD FKEEDFGLFQ LAGQRCIDEG HIDQLLEIIQ 51 100 ENSP00000359385/1-594 NEKNKVIIKN MGWNLVGPVV RCLLCKDKED SKRKVYFLIF DLLVKLCNPK ENSBTAP00000024943/1-592 NEKNKVIVKN MGWNLVGPVV RSLLRNEKED DKRKCHFLLL DLLVKLCNPK BACU002816/1-592 NEKNKVIIKN MGWNLVGPVV RCLLWNDKEH DKRKYYFLML DLLVKLCNPK ENSTTRP00000013689/1-589 NEENKVIIKN MGWNLVGPVV RYLLWNDKEH DKRKYYFLML DLLVKLCNPK bmy_22003T0/1-308 NEKNKVIIKN MGWNLVGPVV RCLLWNDKEH DKRKYYFLML DLLVKLCNPK 101 150 ENSP00000359385/1-594 ELLLGLLELI EEPSGKQISQ SILLLLQPLQ TVIQKL-HNK AYSIGLALST ENSBTAP00000024943/1-592 ELLLGLLELI EEPSGKQISQ IILLLLQPLQ TVIQKLRNNK AYSVGLALST BACU002816/1-592 ELLLGLLELI EEPSGKQISQ IILLLLRPLQ TVIQKLRNNK AYSVGLALST ENSTTRP00000013689/1-589 ELLLGLLELI EEPSGKQISQ IILLLLRPLQ TVIQKLRNNK AYSVGLALST bmy_22003T0/1-308 ELLLGLLELI EEPSGKQISQ IILLLLRPLQ TVIQKLRNNK AYSVGLALST 151 200 ENSP00000359385/1-594 LWNQLSLLPV PYSKEQIQMD DYGLCQCCKA LIEFTKPFVE EVIDNKENSL ENSBTAP00000024943/1-592 LWSQLSLLPV PYSKEQIQAD DYGLCQCCKA LIEFTKPFVE YVIDNKENSM BACU002816/1-592 LWSQLSLLPV PYSKEQIRAD DYGLCQCCKA LIEFTKPFVD DVIDNKENSM ENSTTRP00000013689/1-589 LWSQLSLLPV PYSKEQIQAD DYGLCQCCKA LIEFTKPFVE DVIDNKESSM bmy_22003T0/1-308 LWSQLSLLPV PYSKEQIQAD DYGLCQCCKA LIEFTKPFVE DVIDNKENSM 201 250 ENSP00000359385/1-594 ENEKLKDELL KFCFKSLKCP LLTAQFFEQS EEGGNDPFRY FASEIIGFLS ENSBTAP00000024943/1-592 ENEKLKDEIL KFCLKSLKCP LLTAQFLEQS EEAGDDPLKC FASEIIGFLS BACU002816/1-592 ENEKLKDEIL KFCFRSLKCP LLTAQFLEQS DDTGDDPLRC FASEIIGFLS ENSTTRP00000013689/1-589 ENEKLKDEIL KFCFRSLKCP LLTAQFLEQS DDTGDDPLRC FASEIIGFLS bmy_22003T0/1-308 ENEKLKDEIL KFCFRSLKCP LLTAQFLEQS DDTGDDPLRC FASEIIGFLS 251 300 ENSP00000359385/1-594 AIGHPFPKMI FNHGRKKRTW NYLEFEEEEN KQLADSMASL AYLVFVQGIH ENSBTAP00000024943/1-592 AIGYPFPKMI FNHGRKKKIW DYLEFEEEED KQLSDSMASL AYLVFVQGIS BACU002816/1-592 AIGHPFLKMI FNHGRKKKTW DYLEFEEEED KQLSDSMASL AYLVFVQGIS ENSTTRP00000013689/1-589 AIGHPFLKMI FNHGRKKKTW DYLEFEEEED KQLSDSMASL AYLVFVQGIS bmy_22003T0/1-308 AIGHPFLKMI FNHGRKRKTW DYLEFEEEED KQLSDSMASL AYLVFVQGIS 301 350 ENSP00000359385/1-594 IDQLPMVLSP LYLLQFNMGH IEVFLQRTEE SVISKGLELL ENSLLRIEDN ENSBTAP00000024943/1-592 IDQLPMVLSP SYLLQFNMGH IEVLLQRTEE SVFSKGLDLL ENGLLRIEDN BACU002816/1-592 IDQLPMVLSP SYLLQFNMGH IEVLLQRTEE SVFSKGLDLL ENGLLRIEDN ENSTTRP00000013689/1-589 IDQLPMVLXX XXXXXXXXXX XXXXXXXTEE SVFSKGLYLL ENGLLRIEDN bmy_22003T0/1-308 IDQLPMVL-- ---------- ---------- ---------- ---------- 351 400 ENSP00000359385/1-594 SLLYQYLEIK SFLTVPQGLV KVMTLCPIET LRKKSLAMLQ LYINKLDSQG ENSBTAP00000024943/1-592 SLLHQYLEIK SFLTVPQGLV KVMTLCPIET LRKKGLAVLQ LYINKLDPQG BACU002816/1-592 SLLHQYLEIK SFLTVPQGLV KVMTLCPTET LRKKGLAMLQ LYINKLDPQG ENSTTRP00000013689/1-589 SLLHQYLEIK SFLTVPQGLV KVMTLCPTET LRKKGLAMLQ LYINKLDPQG bmy_22003T0/1-308 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000359385/1-594 KYTLFRCLLN TSNHSGVEAF IIQNIKNQID MSLKRTRNNK WFTGPQLISL ENSBTAP00000024943/1-592 KYTLFRCLLS TSNHSGVEAF IIQNIKNQID ISLKKTQ-NK WFTGPQLISL BACU002816/1-592 KYTLFRCLLN TSNHSGVEAF IIQNIKNQID MSLKRTY-NK WFTGPQLISL ENSTTRP00000013689/1-589 KYTLFRCLLN TSNHSGVEAF IIQNIKNQID MSLKRTY-NK WFTGPQLISL bmy_22003T0/1-308 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000359385/1-594 LDLVLFLPEG AETDLLQNSD RIMASLNLLR YLVIKDNEND NQTGLWTELG ENSBTAP00000024943/1-592 LDLVLVLPEG AETDLLQNSD RIMASLNLLR YLVIKDNEKD NQTGLWTELE BACU002816/1-592 LDLVLFLPEG AETDLLQNSD RIMASLNLLR YLVIKDNEND NQTGLWTELE ENSTTRP00000013689/1-589 LDLVLFLPEG AETDLLQNSD RIMASLNLLR YLVIKDNEND NQTGLWTELE bmy_22003T0/1-308 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000359385/1-594 NIENNFLKPL HIGLNMSKAH YEAEIKNSQE AQKSKDLCSI TVSGEEIPNM ENSBTAP00000024943/1-592 KIENNFLKPL HTGLNMSKAH YEAEIKNSQE VQKSKDHCSL NVGREEIPNM BACU002816/1-592 KIENNFLKPL HTGLNMSKAH YEAEIKNSQE IQKSKDLCSL TVGREEIPNM ENSTTRP00000013689/1-589 KIENNFLKPL HTGLNMSKAH YEAEIKNSQE VQKSKDLCSI TVGREEIPNM bmy_22003T0/1-308 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000359385/1-594 PPEMQLKVLH SALFTFDLIE SVLARVEELI EIKTKSTSEE NIGIK ENSBTAP00000024943/1-592 PPEMQLKVLH SALFTFDLIE SVLARVEELI ETKTKSTSEE NMG-- BACU002816/1-592 PPEMQLKVLH SALFTFDLIE SVLARVEELI EIKTKSTSEE NKG-- ENSTTRP00000013689/1-589 PPE----VLH SALFTFDLIE SVLARVEELI EIKTKSTSEE N-GIK bmy_22003T0/1-308 ---------- ---------- ---------- ---------- -----