KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:29 2014 Check: 00 .. Name: BACU019017/1-240 Len: 377 Check: 2122 Weight: 1.00 Name: ENSTTRP00000001281/1-324 Len: 377 Check: 3005 Weight: 1.00 Name: ENSP00000349358/1-325 Len: 377 Check: 3219 Weight: 1.00 Name: bmy_02198T0/1-377 Len: 377 Check: 257 Weight: 1.00 Name: ENSBTAP00000024959/1-325 Len: 377 Check: 1935 Weight: 1.00 // 1 50 BACU019017/1-240 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000001281/1-324 -------ERG RWASARNVRG LSNSADCCGC CPGTD----- ---------- ENSP00000349358/1-325 ---------- ---------- ---------- ---------- ---------- bmy_02198T0/1-377 PRCRGTRERG RWASARNVRG LSNAADCCGC CPGADPALFV SALSTRTACG ENSBTAP00000024959/1-325 ---------- ---------- ---------- ---------- ---------- 51 100 BACU019017/1-240 PPRKKRRQIS QKPQLLFYQQ PLEGPKHCYE SPQLPITHTR QVPSKPVDHS ENSTTRP00000001281/1-324 ---------- ---PALFVSA LSTRTACTHH EAP------- -----GLGAA ENSP00000349358/1-325 --MKRLGSVQ RKMPCVFVTE VKEEPSSKRE HQPFKVLATE TVSHKALDAD bmy_02198T0/1-377 PTMRRLGSVQ RKMPCVFVTE VKEEPSSKRE HQPFKVLATE TISHKALDAD ENSBTAP00000024959/1-325 --MRRLGSVQ RKMPCVFVTE VKEEPSTKRE HQPFKVLATE TLSHKALDAD 101 150 BACU019017/1-240 TITSWVSPQF DTTAESWFPV NRKHHHRDQA RRSSRKSTSS KFPHLTF--E ENSTTRP00000001281/1-324 ENAVCVCDGG ERGAFHQKGA SXXXXXXXXX XXXXXXXXXX XXXXXXH--S ENSP00000349358/1-325 IYSAIPTEKV DGTCCYVTTY KDQPYLWARL DRKPNKQAEK RFKNFLHSKE bmy_02198T0/1-377 IHSAIPTEKV DGTCCYVTTY KGQPYLWARL DRKPNKLAEK RFKNFLHSKQ ENSBTAP00000024959/1-325 IHNAIPTEKV DGTCCYVTNY KGQPYLWARL DRKPNKLAEK RFKNFLHLKQ 151 200 BACU019017/1-240 SPQSSASSAR PGIPLIRDC- -PSQPEKDIS GRPL------ VPMLSP--QS ENSTTRP00000001281/1-324 NSKEFFWNVE EDFKPVPECW IPAKEIEQLN GNPMPDENGH IPGWVPV-KN ENSP00000349358/1-325 NPKEFFWNVE EDFKPAPECW IPAKETEQIN GNPVPDENGH IPGWVPVEKN bmy_02198T0/1-377 NSKEFFWNVE EDFKPVPECW IPAKEIEQLN GNPMPDENGH IPGWVPVEKN ENSBTAP00000024959/1-325 NSKEFFWNVE EDFKPVPECW IPAKEIEQIN GNPIPDENGH IPGWVPVEKN 201 250 BACU019017/1-240 CGELSAH-AL QNFPYVFIPP DIQSPESSG- ---QGGPIPS ------EQRE ENSTTRP00000001281/1-324 NKQYCWH-SS VNYEFEIA-V LRHHSDDPS- LEISAXXXXX XXXXXXXXXX ENSP00000349358/1-325 NKQYCWHSSV VNYEFEIALV LKHHPDDSGL LEISAVPLSD LLEQTLELIG bmy_02198T0/1-377 NKQYCWHSSV VNYEFEIALV LRHHSDDPGL LEISAVPLSD LLEQTLELIG ENSBTAP00000024959/1-325 SKQHCWHSSV VDYESEIALV LRHHPDDPGL LEISAVPLSD LLEQTLELIG 251 300 BACU019017/1-240 NSLPSCSLHT STPKSP---- -EPGPVLVKD TPEDKYGIKV TW-------- ENSTTRP00000001281/1-324 XXXXXXXXXL GSKKHPLHLL IPHGAFQIRN LPTLKHNDLL SWFEGCREGK ENSP00000349358/1-325 TNINGNPYGL GSKKHPLHLL IPHGAFQIRN LPSLKHNDLV SWFEDCKEGK bmy_02198T0/1-377 TNINGNPYGL GSKKHPLHLL IPHGAFQIRN LPTLKHNDLL SWFEGCREGK ENSBTAP00000024959/1-325 TNINGNPYGL GSKKHPLHLL IPHGAFQIRN LPTLKHSDLL SWFDGCREGK 301 350 BACU019017/1-240 ---------- ----RRRRHL F--------T YLRER----- ---------- ENSTTRP00000001281/1-324 IEGIVWHCSD GCLIKVHRHH LGLCWPIPDT YMNSKPVIIN MNLNNYVYAF ENSP00000349358/1-325 IEGIVWHCSD GCLIKVHRHH LGLCWPIPDT YMNSRPVIIN MNLNKCDSAF bmy_02198T0/1-377 IEGIVWHCSD GCLIKVHRHH LGLCWPIPDT YMNSKPVIIN MNLNNYVYAF ENSBTAP00000024959/1-325 IEGIVWHCND GCLIKVHRHH LGLCWPIPDT YMNSKPVIIN MNLNKYEYAF 351 400 BACU019017/1-240 ---------G KLSRSQF--- ---LVKN ENSTTRP00000001281/1-324 DAKCLFNHFS KIDNQKFGRL KDIILNV ENSP00000349358/1-325 DIKCLFNHFL KIDNQKFVRL KDIIFDV bmy_02198T0/1-377 DAKCLFNHFS KIDNQKFGRL KDIILNV ENSBTAP00000024959/1-325 DAKCLFNHFS KIDNQKFGRL KDIILTV