KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:30 2014 Check: 00 .. Name: bmy_02972T0/1-572 Len: 655 Check: 8935 Weight: 1.00 Name: BACU014138/1-393 Len: 655 Check: 7071 Weight: 1.00 Name: ENSTTRP00000001153/1-345 Len: 655 Check: 8336 Weight: 1.00 Name: ENSBTAP00000024963/1-345 Len: 655 Check: 6891 Weight: 1.00 Name: ENSP00000376071/1-589 Len: 655 Check: 8996 Weight: 1.00 // 1 50 bmy_02972T0/1-572 ---------- ---------- ---------- ----MRATVP FQLKQQ-QQQ BACU014138/1-393 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001153/1-345 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024963/1-345 ---------- ---------- ---------- ---------- ---------- ENSP00000376071/1-589 MSQRVRRNGS PTPAGSLGGG AVATAGGPGS RLQPMRATVP FQLKQQQQQQ 51 100 bmy_02972T0/1-572 HGSPTRSNGG GGGN-NGGCC GGASGPSGGG GSSGAPRTAS RSTSPTRGGG BACU014138/1-393 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001153/1-345 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024963/1-345 ---------- ---------- ---------- ---------- ---------- ENSP00000376071/1-589 HGSPTRSGGG GGGNNNGGCC GGASGPAGGG G-GGGPRTAS RSTSPTRGGG 101 150 bmy_02972T0/1-572 SAAARTSPTV ATQTGASSTS TRGTSPTRGA APGARGSPPR PQPPPPLLGT BACU014138/1-393 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001153/1-345 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024963/1-345 ---------- ---------- ---------- ---------- ---------- ENSP00000376071/1-589 NAAARTSPTV ATQTGASATS TRGTSPTRSA APGARGSPPR PPPPPPLLGT 151 200 bmy_02972T0/1-572 VSSPSSSPTH LWTGEVSAAP PAARVRHRRR SPEQSRSSPE RRSPSAPLCK BACU014138/1-393 ---------- ---------- ---------- ---------- -------VLI ENSTTRP00000001153/1-345 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024963/1-345 ---------- ---------- ---------- ---------- ---------- ENSP00000376071/1-589 VSSPSSSPTH LWTGEVSAAP PPARVRHRRR SPEQSRSSPE KRSPSAPVCK 201 250 bmy_02972T0/1-572 AGDKARPPSS SPSSIIRRTS SLDTLAAPYL AGHWPRDGHG QAAPCMRDKA BACU014138/1-393 LGDKARPPSS SPSSIIRRTS SLDTLAAPYL AGHWPRDGHG QAAPCMRDKA ENSTTRP00000001153/1-345 ---------- ---------- ---------- ---------- -----MRDKA ENSBTAP00000024963/1-345 ---------- ---------- ---------- ---------- -----MRDKA ENSP00000376071/1-589 AGDKTRQPSS SPSSIIRRTS SLDTLAAPYL AGHWPRDSHG QAAPCMRDKA 251 300 bmy_02972T0/1-572 TQ-------- ---------- ---------- ---IAKLRQQ LQRSKHSSRH BACU014138/1-393 TQTESAWAEE YSEKKKGSHK RSASWGSTDQ LKEIAKLRQQ LQRSKHSSRH ENSTTRP00000001153/1-345 TQTESAWAEE YSEKKKGSHK RSASWGSTDQ LKEIAKLRQQ LQRSKHSSRH ENSBTAP00000024963/1-345 TQTESAWAEE YSEKKKGSHK RSASWGSTDQ LKEIAKLRQQ LQRSKHSSRH ENSP00000376071/1-589 TQTESAWAEE YSEKKKGSHK RSASWGSTDQ LKEIAKLRQQ LQRSKHSSRH 301 350 bmy_02972T0/1-572 HRDKERQSPF HGNHAAINQC QSYPHTLKQI QLTMSNESML PSRELKGSIK BACU014138/1-393 HRDKERQSPF HGNHAAINQC Q--------- ---------- ---------- ENSTTRP00000001153/1-345 HRDKERQSPF HGNHAAINQC Q--------- ---------- ---------- ENSBTAP00000024963/1-345 HRDKERQSPF HGNHAAINQS Q--------- ---------- ---------- ENSP00000376071/1-589 HRDKERQSPF HGNHAAINQC Q--------- ---------- ---------- 351 400 bmy_02972T0/1-572 CIFSPPPPLF LKAPVPKSAL IPVIPITKST SSRFRNSVEG LNQEIEIIIK BACU014138/1-393 ---------- --APVPKSAL IPVIPITKSA GSRFRNSVEG LNQEIEIIIK ENSTTRP00000001153/1-345 ---------- --APVPKSAL IPVIPITKST GSRFRNSVEG LNQEIEIIIK ENSBTAP00000024963/1-345 ---------- --APVPKSAL IPVIPITKST GSRFRNSVEG LNQEIEIIIK ENSP00000376071/1-589 ---------- --APVPKSAL IPVIPITKST GSRFRNSVEG LNQEIEIIIK 401 450 bmy_02972T0/1-572 ETGEKEEQLI ---------- ------RSSS TRSIDTQTPG GAERGSNSSS BACU014138/1-393 ETGEKEEQLI PQDIPDGHRA PPPLVQRSSS TRSIDTQTPG GAERGSNSSS ENSTTRP00000001153/1-345 ETGEKEEQLI PQDIPDGHRA PPPLVQRSSS TRSIDTQTPG GAERGSNSSS ENSBTAP00000024963/1-345 ETGEKEEQLI PQDIPDGHRA PPPLAQRSSS TRSTDTQTPG GAERGSNDSS ENSP00000376071/1-589 ETGEKEEQLI PQDIPDGHRA PPPLVQRSSS TRSIDTQTPG GADRGSNNSS 451 500 bmy_02972T0/1-572 RSQSVSPTSF LTISNEGSEE SPCSADDLLV DPRDKEIVTR GAEKSNREIL BACU014138/1-393 RSQSVSPTSF LTISNERSEE SPCSADDLLV DPRDKD---- NGNNSPLPKY ENSTTRP00000001153/1-345 RSQSVSPTSF LTISNEGSEE SPCSADDLLV DPRDKD---- NGNNSPLPKY ENSBTAP00000024963/1-345 RSQSVSPTSF LTISNEGSEE SPCSADDLLV DPRDKE---- NGNNSPLPKY ENSP00000376071/1-589 RSQSVSPTSF LTISNEGSEE SPCSADDLLV DPRDKE---- NGNNSPLPKY 501 550 bmy_02972T0/1-572 RGRPGVNDKQ PVKNHFSYLS WEEWKWHLSP YAVYGIGIRQ QHRSVFSAEK BACU014138/1-393 ATSPKPNN-- ------SYMF KREP-----P EGC------- ERVKVFEECS ENSTTRP00000001153/1-345 ATSPKPNN-- ------SYMF KREP-----P EGC------- ERVKVFEECS ENSBTAP00000024963/1-345 ATSPKPNN-- ------SYMF KREP-----P EGC------- ERVKVFEECS ENSP00000376071/1-589 ATSPKPNN-- ------SYMF KREP-----P EGC------- ERVKVFEECS 551 600 bmy_02972T0/1-572 PKQLHEIPAF YCPDKNKVNF IPKSGSAFCL VSILKPLLPT PDLTLKGSGH BACU014138/1-393 PKQLHEIPAF YCPDKNKVNF IPKSGSAFCL VSILKPLLPT PDLTLKGSGH ENSTTRP00000001153/1-345 PKQLHEIPAF YCPDKNKVNF IPKSGSAFCL VSILKPLLPT PDLTLKGSGH ENSBTAP00000024963/1-345 PKQLHEIPAF YCPDKNKVNF IPKSGSAFCL VSILKPLLPT PDLTLKGSGH ENSP00000376071/1-589 PKQLHEIPAF YCPDKNKVNF IPKSGSAFCL VSILKPLLPT PDLTLKGSGH 601 650 bmy_02972T0/1-572 SLTVTTGMTT TLLQPIAVAS LSTNTEQDRV SRGTSTVPPP ASLLPPPEPI BACU014138/1-393 SLTVTTGMTT TLLQPIAVAS LSTNTEQDRV SRGTSTVPPP ASLLPPPEPI ENSTTRP00000001153/1-345 SLTVTTGMTT TLLQPIAVAS LSTNTEQDRV SRGTSTVPPP ASLLPPPEPL ENSBTAP00000024963/1-345 SLTVTTGMTT TLLQPIAVAS LSTNTEQDRV SRGTSTVLPP ASLLPTPEPI ENSP00000376071/1-589 SLTVTTGMTT TLLQPIAVAS LSTNTEQDRV SRGTSTVMPS ASLLPPPEPI 651 700 bmy_02972T0/1-572 EEAEG BACU014138/1-393 EEAEG ENSTTRP00000001153/1-345 RKAEG ENSBTAP00000024963/1-345 EEAEG ENSP00000376071/1-589 EEAEG