KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:30 2014 Check: 00 .. Name: ENSTTRP00000003583/1-552 Len: 556 Check: 9806 Weight: 1.00 Name: bmy_01545T0/1-549 Len: 556 Check: 1686 Weight: 1.00 Name: BACU019768/1-521 Len: 556 Check: 3246 Weight: 1.00 Name: ENSBTAP00000024965/1-524 Len: 556 Check: 7709 Weight: 1.00 Name: ENSP00000360290/1-552 Len: 556 Check: 5556 Weight: 1.00 // 1 50 ENSTTRP00000003583/1-552 MAEKQKHDGR VKIGHYVLGD TLGVGTFGKV KIGEHQLTGH KVAVKILNRQ bmy_01545T0/1-549 ---MFPAKVT QAVEESRKDS STTNYSYAIY LFGEHQLTGH KVAVKILNRQ BACU019768/1-521 ---------- ---------- ---------- -VGEHQLTGH KVAVKILNRQ ENSBTAP00000024965/1-524 ---------- ---------- ---------- --GEHQLTGH KVAVKILNRQ ENSP00000360290/1-552 MAEKQKHDGR VKIGHYVLGD TLGVGTFGKV KIGEHQLTGH KVAVKILNRQ 51 100 ENSTTRP00000003583/1-552 KIRSLDVVGK IKREIQNLKL FRHPHIIKL- ---XXXXXXX XXXXXXXXXX bmy_01545T0/1-549 KIRSLDVVGK IKREIQNLKL FRHPHIIKL- ---YQVISTP TDFFMVMEYV BACU019768/1-521 KIRSLDVVGK IKREIQNLKL FRHPHIIKL- ---YQVISTP TDFFMVMEYV ENSBTAP00000024965/1-524 KIRSLDVVGK IKREIQNLKL FRHPHIIKLD KKRYQVISTP TDFFMVMEYV ENSP00000360290/1-552 KIRSLDVVGK IKREIQNLKL FRHPHIIKL- ---YQVISTP TDFFMVMEYV 101 150 ENSTTRP00000003583/1-552 XXXXXXXXXX XXXXVEEMEA RRLFQQILSA VDYCHRHMVV HRDLKPENVL bmy_01545T0/1-549 SGGELFDYIC KHGRVEEMEA RRLFQQILSA VDYCHRHMVV HRDLKPENVL BACU019768/1-521 SGGELFDYIC KHGRVEEMEA RRLFQQILSA VDYCHRHMVV HRDLKPENVL ENSBTAP00000024965/1-524 SGGELFDYIC KHGRVEEMEA RRLFQQILSA VDYCHRHMVV HRDLKPENVL ENSP00000360290/1-552 SGGELFDYIC KHGRVEEMEA RRLFQQILSA VDYCHRHMVV HRDLKPENVL 151 200 ENSTTRP00000003583/1-552 LDAHMNAKIA DFGLSNMMSD GEFLRTSCGS PNYAAPEVIS GRLYAGPEVD bmy_01545T0/1-549 LDAHMNAKIA DFGLSNMMSD GEFLRTSCGS PNYAAPEVIS GRLYAGPEVD BACU019768/1-521 LDAHMNAKIA DFGLSNMMSD GEFLRTSCGS PNYAAPEVIS GRLYAGPEVD ENSBTAP00000024965/1-524 LDAQMNAKIA DFGLSNMMSD GEFLRTSCGS PNYAAPEVIS GRLYAGPEVD ENSP00000360290/1-552 LDAHMNAKIA DFGLSNMMSD GEFLRTSCGS PNYAAPEVIS GRLYAGPEVD 201 250 ENSTTRP00000003583/1-552 IWSCGVILYA LLCGTLPFDD EHVPTLFKKI RGGVFYIPEY LNRSVATLLM bmy_01545T0/1-549 IWSCGVILYA LLCGTLPFDD EHVPTLFKKI RGGVFYIPEY LNRSVATLLM BACU019768/1-521 IWSCGVILYA LLCGTLPFDD EHVPTLFKKI RGGVFYIPEY LNRSVATLLM ENSBTAP00000024965/1-524 IWSCGVILYA LLCGTLPFDD EHVPTLFKKI RGGVFYIPEY LNRSVATLLM ENSP00000360290/1-552 IWSCGVILYA LLCGTLPFDD EHVPTLFKKI RGGVFYIPEY LNRSVATLLM 251 300 ENSTTRP00000003583/1-552 HMLQVDPLKR ATIKDIREHE WFKQDLPSYL FPEDPSYDAN IIDDEAVKEV bmy_01545T0/1-549 HMLQVDPLKR ATIKDIREHE WFKQDLPSYL FPEDPSYDAN VIDDEAVKEV BACU019768/1-521 HMLQVDPLKR ATIKDIREHE WFKQDLPSYL FPEDPSYDAN VIDDEAVKEV ENSBTAP00000024965/1-524 HMLQVDPLKR ATIKDIREHE WFKQDLPSYL FPEDPSYDAN VIDDEAVKEV ENSP00000360290/1-552 HMLQVDPLKR ATIKDIREHE WFKQDLPSYL FPEDPSYDAN VIDDEAVKEV 301 350 ENSTTRP00000003583/1-552 CEKFECTESE VMNSLYSGDP QDQLAVAYHL IIDNRRIMNQ ASEFYLASSP bmy_01545T0/1-549 CEKFECTESE VMNSLYSGDP QDQLAVAYHL IIDNRRIMNQ ASEFYLASSP BACU019768/1-521 CEKFECTESE VMNSLYSGDP QDQLAVAYHL IIDNRRIMNQ ASEFYLASSP ENSBTAP00000024965/1-524 CEKFECTESE VMNSLYSGDP QDQLAVAYHL IIDNRRIMNQ ASEFYLASSP ENSP00000360290/1-552 CEKFECTESE VMNSLYSGDP QDQLAVAYHL IIDNRRIMNQ ASEFYLASSP 351 400 ENSTTRP00000003583/1-552 PTGSFMDDSA MHIPPGLKPH PERMPPLVAD SPKARCPLDA LNTTKPKSLA bmy_01545T0/1-549 PTGSFMDDSA MHIPPGLKPH PERMPPLVAD SPKARCPLDA LNTTKPKSLA BACU019768/1-521 PTGSFMDDSA MHIPPGLKPH PERMPPLVAD SPKARCPLDA LNTTKPKSLA ENSBTAP00000024965/1-524 PTGSFMDDST MHIPPGLKPH PERMPPLIAD SPKARCPLDA LNTTKPKSLA ENSP00000360290/1-552 PSGSFMDDSA MHIPPGLKPH PERMPPLIAD SPKARCPLDA LNTTKPKSLA 401 450 ENSTTRP00000003583/1-552 VKKAKWHLGI RSQSKPYDIM AEVYRAMKQL DFEWKVVNAY HLRVRRRNPV bmy_01545T0/1-549 VKKAKWHLGI RSQSKPYDIM AEVYRAMKQL DFEWKVVNAY HLRVRRRNPV BACU019768/1-521 VKKAKWHLGI RSQSKPYDIM AEVYRAMKQL DFEWKVVNAY HLRVRRRNPV ENSBTAP00000024965/1-524 VKKAKWHLGI RSQSKPYDIM AEVYRAMKQL DFEWKVVNAY HLRVRRRNPV ENSP00000360290/1-552 VKKAKWHLGI RSQSKPYDIM AEVYRAMKQL DFEWKVVNAY HLRVRRKNPV 451 500 ENSTTRP00000003583/1-552 TGNYVKMSLQ LYLVDNRSYL LDFKSIDDEV VEQRSGSSTP QRSCSAAGLH bmy_01545T0/1-549 TGNNVKMSLQ LYLVDNRSYL LDFKSIDDEV VEQRSGSSTP QRSCSAAGLH BACU019768/1-521 TGNNVKMSLQ LYLVDNRSYL LDFKSIDDEV VEQRSGSSTP QRSCSAAGLH ENSBTAP00000024965/1-524 TGNYVKMSLQ LYLVDNRSYL LDFKSIDDEV VEQRSGSSTP QRSCSAAGLH ENSP00000360290/1-552 TGNYVKMSLQ LYLVDNRSYL LDFKSIDDEV VEQRSGSSTP QRSCSAAGLH 501 550 ENSTTRP00000003583/1-552 RPRSSLDSVT AESHLLSGSL SGSLIGSTSS SVPPRLGSHT MDFFEMCASL bmy_01545T0/1-549 RPRSSLDSVT AESHSLSGSL MGSLIGSTSS SVPPRLGSHT MDFFEMCASL BACU019768/1-521 RPRSSLDSVT AESHSLSGSL MGSFIGSTSS SVPPRLGSHT MDFFEMCASL ENSBTAP00000024965/1-524 RPRSSLDSVT AEGHSLSGSL TGSLTGSMSS SVSPRLGSHT MDFFEMCASL ENSP00000360290/1-552 RPRSSFDSTT AESHSLSGSL TGSLTGSTLS SVSPRLGSHT MDFFEMCASL 551 600 ENSTTRP00000003583/1-552 ITTLAR bmy_01545T0/1-549 ITTLAR BACU019768/1-521 ITTLAR ENSBTAP00000024965/1-524 ITTLAR ENSP00000360290/1-552 ITTLAR