KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:31 2014 Check: 00 .. Name: ENSP00000296142/1-232 Len: 341 Check: 8433 Weight: 1.00 Name: bmy_05633T0/1-309 Len: 341 Check: 2768 Weight: 1.00 Name: ENSBTAP00000024988/1-234 Len: 341 Check: 8114 Weight: 1.00 Name: BACU020566/1-254 Len: 341 Check: 5379 Weight: 1.00 Name: ENSTTRP00000016394/1-228 Len: 341 Check: 6206 Weight: 1.00 // 1 50 ENSP00000296142/1-232 ---------- ---------- ---------- ---------- ---------- bmy_05633T0/1-309 MKPCLPCLSK FPVEPSAVLG TWSQNQLTFV LGAKTWSTSP VQGHKGRVGL ENSBTAP00000024988/1-234 ---------- ---------- ---------- ---------- ---------- BACU020566/1-254 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016394/1-228 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000296142/1-232 ---------- ---------- ---------- --MAGDTEVW KQMFQELMRE bmy_05633T0/1-309 NPCSLKWETS CPAPDPSEPR RHCRTQLTGT AAMRQDMEVW KQVFQELIQE ENSBTAP00000024988/1-234 ---------- ---------- ---------- --MDLDMKVW KRVFQELIQE BACU020566/1-254 ---------- ---------- ---------- --MRQDMEVW KQVFQELIRE ENSTTRP00000016394/1-228 ---------- ---------- ---------- --MRQDMEAW KQVFQELIRE 101 150 ENSP00000296142/1-232 VKPWHRWTLR PDKGLLPNVL KPGWMQYQQW TFAR------ -----FQCSS bmy_05633T0/1-309 VKPWHTWKLT LDKSLLPNIL KPGWTQYQQW TFAR------ -----FQCSS ENSBTAP00000024988/1-234 VKPCHTWQLT LDKSLLPNIL KPGWAQYQQR TFAR------ -----FQCSL BACU020566/1-254 VKPWHTWKLT LDKSLLPNIL KPGWTQYQQW TFASQAEGLV FFLHGFQCSS ENSTTRP00000016394/1-228 VKPWHTWKLT RDKSLLPNIL KPGWTQYQQW TCAR------ -----FQCSS 151 200 ENSP00000296142/1-232 CSRNWASAQV LVLFHMNWSE EKSRGQVKMR VFTQRCKKCP QPLFEDPEFT bmy_05633T0/1-309 CSRNWASAQV QVLFHMHWSE GESRGQVKMR VFAQRCQKCS QPSFEVPEFT ENSBTAP00000024988/1-234 CSRNWASAQV QVLFHMHWSE GESRGQVKMR VFAQRCQKCS QPSFEVPEFT BACU020566/1-254 CSRNWASAQV QVLFHMHWSE GESRGQVKMR VFAQRCQKCS QPSFEVPKFT ENSTTRP00000016394/1-228 CSRNWASAQV QVLFHMHWSE GESRGQVKMR VFAQRCQKCS KPSFEVPKFT 201 250 ENSP00000296142/1-232 QENISRILKN LVFRILKKCY RGRFQLIEEV PMIKDISLEG PHNSDNCEAC bmy_05633T0/1-309 EENISRILNN LVLRILKKCY REGFTLV-EI PVIKEISLEG PHDSDNCEAC ENSBTAP00000024988/1-234 EENISRILNN LVLQILKKCY REGIKFV-NS PMIKAIALKG PHNSDNCEAC BACU020566/1-254 EENISRILNN LVLQILKKCY REGFTLV-EI PVIKEISLEG PHDSDNCEAC ENSTTRP00000016394/1-228 EENISRILNN LVLQILKKCY REGFTLV-EI PMIKEISLEG PHDSDNCEAC 251 300 ENSP00000296142/1-232 LQGFC----- ---------A GPIQVTSLPP SQ-TPRVHSI YKVEEVVKPW bmy_05633T0/1-309 LQGFCVQSE- ------SGLA MWSPISPLPP TISSPILGNT IEIPSPTRSS ENSBTAP00000024988/1-234 LQGVCVQ--- ------SWFP EPTPAESLPT SW-SPRMNTS FQRERRDQDS BACU020566/1-254 LQGFCMQVKK KKVLPRQSFP ETTQAESLPT SW-SPGANTN FQAERRDQNS ENSTTRP00000016394/1-228 LQGFC----- ---------A ETTQAESLPI SW-SPRANTN FQAEEETRTP 301 350 ENSP00000296142/1-232 ASGENVYSYA CQNHICRNLS IF-CCCVILI VIVVIVVKTA I bmy_05633T0/1-309 TGGDAVKKKK IPEN--NAIN FK-------- ---IWSLSDN F ENSBTAP00000024988/1-234 SCDQSFYSHP AQHP--RSTG IG-CCCFILT LIVIIIIIVA V BACU020566/1-254 FNNCTFYSHT AQHT--RSLG MS-CSCLILI IIIVIVVKTT I ENSTTRP00000016394/1-228 ST--IVSSHT AQRT--RSLG MSCCCCLMLI IIIVIVVKTT I