KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:24:33 2014 Check: 00 .. Name: ENSP00000367815/1-725 Len: 811 Check: 4513 Weight: 1.00 Name: ENSBTAP00000024994/1-643 Len: 811 Check: 804 Weight: 1.00 Name: bmy_21382T0/1-605 Len: 811 Check: 6300 Weight: 1.00 Name: ENSTTRP00000001939/1-647 Len: 811 Check: 1479 Weight: 1.00 // 1 50 ENSP00000367815/1-725 MHPEPSEPAT GGAAELDCAQ EPG----VEE SAGDHGSAGR GGCKEEINDP ENSBTAP00000024994/1-643 MHPEASEPVV DGVAEQECAQ EPG----VEE SAGDHGNAGE GGRKEEMNDP bmy_21382T0/1-605 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001939/1-647 MNRDASEPVA DGGAEQDCAR EPGLEPAVEE SAGDHGNAGQ GGRKEEINDP 51 100 ENSP00000367815/1-725 KEICVGSSDT SYHSQQKQSG DNGSGGHFAH PREDREDRGP RMTKSSLQKL ENSBTAP00000024994/1-643 KETCVGPLNT SCLSEQKQSG DSWSDGRLAH QRADKEDRGA RMTKKFLQKL bmy_21382T0/1-605 ---------- ---------- ---------- ---------- -MTKNFLQKL ENSTTRP00000001939/1-647 KETCVGPSDT SYLSEQKHSG DSWSEGHLAQ QRDDKEDRGP RMTKNFLRKL 101 150 ENSP00000367815/1-725 CKQHKLYITP ALNDTLYLHF KGFDRIENLE EYTGLRCLWL QSNGIQKIEN ENSBTAP00000024994/1-643 CKQHKLYITP ALNDTLYLHY KGFDRIENLE EYTGLRCLWL ECNGIQKIEN bmy_21382T0/1-605 CKKHKLYITP ALNDTLYLHY KGFDRIENLE EYTGLRCLWL ECNGIQKIEN ENSTTRP00000001939/1-647 CKQHKLYITP ALNDALYLHY KGFDRIENLE EYTGLRCLWL ECNGIQKIEN 151 200 ENSP00000367815/1-725 LEAQTELRCL FLQMNLLRKI ENLEPLQKLD ALNLSNNYIK TIENLSCLPV ENSBTAP00000024994/1-643 LEAQTELRCL FLQVNLLHKI ENLEPLQKLD ALNISNNYIK TIENLSCLPV bmy_21382T0/1-605 LEAQTELRCL FLQVNLLHKI ENLEPLQKLD ALNISNNYIK TIENLSCLPV ENSTTRP00000001939/1-647 LEAQTELRCL FLQVNLLHKI ENLEPLQKLD ALNISNNYIK TIENLSCLPV 201 250 ENSP00000367815/1-725 LNTLQMAHNH LETVEDIQHL QECLRLCVLD LSHNKLSDPE ILSILESMPD ENSBTAP00000024994/1-643 LNTLQMAHNH LETVEDIQHL RECARLCVLD LSHNKLSDPE ILRVLESMPD bmy_21382T0/1-605 LNTLQMAHNH LETVEDVQHL KECLKLCVLD LSHNKLSDPE ILSILESMPD ENSTTRP00000001939/1-647 LNTLQMAHNH LETVEDVQHL KECLKLCVLD LSHNQLSDPE ILSILESMPN 251 300 ENSP00000367815/1-725 L--------- ---------- ------RVLN LMGNPVIRQI PNYRRTVTVR ENSBTAP00000024994/1-643 L--------- ---------- ------RVLN LMGNPVIKNI PNYRRILTVR bmy_21382T0/1-605 LNTTHINCFH RIHFSVINVV LPVCFQRVLN LMGNPVIRNI PNYRRTVTVR ENSTTRP00000001939/1-647 L--------- ---------- ------RVLN LMGNPVIRNI PNYRRTLTVR 301 350 ENSP00000367815/1-725 LKHLTYLDDR PVFPKDRACA EAWARGGYAA EKEERQQWES RERKKITDSI ENSBTAP00000024994/1-643 LKHLTYLDDR PVFPKDRACA EAWARGGYAA EKEERQQWEM RERKKITDSI bmy_21382T0/1-605 LKRLTYLDDR PVFPKDRACA EAWARGGYTA EKEERQQWES RERKKITDSI ENSTTRP00000001939/1-647 LKHLTYLDDR PVFPKDRACA EAWAQGGYKA EQEERQQWES RERKKITDSI 351 400 ENSP00000367815/1-725 EALAMIKQRA EERKRQRESQ ERGEMTSSDD GENVPASAEG KEEPPGDRET ENSBTAP00000024994/1-643 EALAALRRQA EERKWQRASQ EQGEEPTPAG AGDVDAEVEG EEEPQ-EKDT bmy_21382T0/1-605 EALAAIKRRA KERKRQNASQ EQGACLRHE- -EDPKLRTGG FQTRGFCPSS ENSTTRP00000001939/1-647 EALAAIKRQA EERKQQKASQ EQGEMLAPDS ARDLGATVEG EEAPEKDRER 401 450 ENSP00000367815/1-725 RQKMELFVKE SFEAKDELCP EKPSGEEPPV EAKREDGGPE PEGTLPAETL ENSBTAP00000024994/1-643 RQKIEQFVKE SFEAKDELFP EKPEEPSLLE E--------- ----LPLDV- bmy_21382T0/1-605 WNRLNL---- GFARLSTVY- ---------- ---------- -------ET- ENSTTRP00000001939/1-647 WQKTELFVKE SFEAKDELFP EKSEESSLPE E--------- ----LPVDA- 451 500 ENSP00000367815/1-725 LLSSPVEVKG EDGDGEPEGT LPAEAPPPPP PVEVKGEDGD QEPEGTLPAE ENSBTAP00000024994/1-643 ---------- ----GEPKGV LPSEALPASP RA-------- ---------- bmy_21382T0/1-605 ---------- ---NSKINIT LCCSL----- ---------- ---------- ENSTTRP00000001939/1-647 ---------- ---DGEPGAA LPAKAPPPAP EL-------- ---------- 501 550 ENSP00000367815/1-725 TLLLSPPVKV KGEDGDREPE GTLPAEAPPP PPLGAAREEP TPQAVATEGV ENSBTAP00000024994/1-643 ---------- ---------- ---------- -----AWAEL APQTVATESA bmy_21382T0/1-605 ---------- ---------- ---------- --------ES APQTVATESA ENSTTRP00000001939/1-647 ---------- ---------- ---------P GKVGGEQQGS APQTVATESA 551 600 ENSP00000367815/1-725 FVTELDGTRT EDLETIRLET KETFCIDDLP DLEDDDETGK SLEDQ--NMC ENSBTAP00000024994/1-643 SGTEPDG--A ENLEATRLET KEQLFIDDLP DLEDVN-AGE SLGDRDREQC bmy_21382T0/1-605 SGTELCG--A EDLEAIRLET KEKLFIDDLP DLEDVD-XGG SPGDQHKKXC ENSTTRP00000001939/1-647 SGTELCG--A EDLEAIRLET KEKLFIDDLP DLEDVD-AGG SPGDQ--KMC 601 650 ENSP00000367815/1-725 FPKIEVISSL SDDSDPELDY TSLPVLENLP TDTLSNIFAV SKDTSKAA-- ENSBTAP00000024994/1-643 FPKITAISSL SDASEPDMDD ISLLALENTS SDTLSSIFAV PKDTSWRVET bmy_21382T0/1-605 FPKITAISSL SDDSDPELDY TSLPVLENAS TDTLSNIFAV SKDTSRKAET ENSTTRP00000001939/1-647 FPKITAISSL GDDSDPELDY TSLPVLENAS TDPLSSIFAV SKDTSRKAET 651 700 ENSP00000367815/1-725 RVPFTDIFKK EAKRDLEIRK QDTKSPRPLI QEL-SDEDPS GQLLMPPTCQ ENSBTAP00000024994/1-643 ETPFTDILKV APERDPETQR KASEVPRPLI QELGDDEEPS GPPPLPPVCE bmy_21382T0/1-605 ETPFTGIFKA AAERDLDTHR RDTKAPRPLI QEL-DDDEPS GRPPWPPACE ENSTTRP00000001939/1-647 ETPFTGIFKA AAERDLATHS RDTKAPRPLI QEL-DDDEPS GQPPWPPACK 701 750 ENSP00000367815/1-725 RDAAPLTSSG DRDSDFLAAS SP-------- ---------- ----VPTESA ENSBTAP00000024994/1-643 GEAVPAPCTE DSDGDLLPAP APG------- ---------- --NGPEKDEV bmy_21382T0/1-605 REAAPAPCSE DRDGDLLLAS PPGSVTQLSR LQGPKASQGE MDCGPPKPRV ENSTTRP00000001939/1-647 REAAPAPCSE DRHGDLLLAS PP-------- ---------- --AGLPFPSK 751 800 ENSP00000367815/1-725 ATPPETC--- ---------- ---------- -------VGV AQPSQALPTW ENSBTAP00000024994/1-643 QSEVEPE--- ---------- ---------- ------ERLG SEAGENREDI bmy_21382T0/1-605 GGHLGLCPRN TRVLRGGHSR PLQRPRRSLQ HVPKSSARAK ELPDRPPPRP ENSTTRP00000001939/1-647 AAVTRAC--- ---------- ---------- -------RAL DMDGTVLPAL 801 850 ENSP00000367815/1-725 DLTAFPAPKA S ENSBTAP00000024994/1-643 EFGLD----- - bmy_21382T0/1-605 SPSLALPDQG C ENSTTRP00000001939/1-647 KA-------- -