KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:36 2014 Check: 00 .. Name: ENSP00000368805/1-506 Len: 554 Check: 8611 Weight: 1.00 Name: ENSBTAP00000025010/1-489 Len: 554 Check: 5883 Weight: 1.00 Name: ENSTTRP00000003446/1-507 Len: 554 Check: 2247 Weight: 1.00 Name: bmy_00842T0/1-342 Len: 554 Check: 37 Weight: 1.00 Name: BACU005144/1-552 Len: 554 Check: 5779 Weight: 1.00 // 1 50 ENSP00000368805/1-506 ---------- ---------- ---------- ---------- ------MPAA ENSBTAP00000025010/1-489 ---------- ---------- ---------- ---------- -----RMPAP ENSTTRP00000003446/1-507 ---------- ---------- ---------- ---------- ------MPAE bmy_00842T0/1-342 ---------- ---------- ---------- ---------- ------MPAE BACU005144/1-552 MESDCYRVAT SSQIPARTGD FARIINTRKA CKGGRSRAES ASEEGQMPAE 51 100 ENSP00000368805/1-506 AVQEAVGVCS YGMQLSWDIN DPQMPQELAL FDQFREWPDG YVRFIYSSDE ENSBTAP00000025010/1-489 EAQLADCAWS YGMKLSWDIN DPQMPQKPAH FDRFCEWPDG YVRFIYSSDE ENSTTRP00000003446/1-507 AGQQADGACS HGMKLSWDIN DPQMPREPDH FDRFCEWPDG YVRLIYRSGE bmy_00842T0/1-342 AGQQADGACS HGMKLSWDIN DPQMPR---- ---------- ---------- BACU005144/1-552 AGQQADGACS HGMKLGWDIN DPQMPREPAH FDRFCEWPDG YVRFIYRSDE 101 150 ENSP00000368805/1-506 KKAQRHLSGW AMRNTNNHNG HILKKSCLGV VVCTQACTLP DGSRLQLRPA ENSBTAP00000025010/1-489 KKAQRHLSGW AMRNTNNHNG HILKKSCLGV VVCAQDCALP DGSRLQLRPA ENSTTRP00000003446/1-507 KKAQRHLSGW AMRNTNNHNG HILKKSCLGV VVCARDCALP DGSRLQLRPA bmy_00842T0/1-342 ---------- ---------- ---------- ---------- ---------- BACU005144/1-552 KQAQRHLSGW AMRNTNNHNG HILKKSCLGV VVCARDCALP GGSRLQLRPA 151 200 ENSP00000368805/1-506 ICDKARLKQQ KKACPNCHSA LELIPCRGHS GYPVTNFWRL DGNAIFFQAK ENSBTAP00000025010/1-489 ICDKARLKQQ KKPCPNCHSA LELIPCRGHS GYPVTNFWRL DGNAIFFQAK ENSTTRP00000003446/1-507 ICDKARLKQQ KKACPNCHAA LELIPCRGHS GYPVTNFWRL DGNAIFFQAK bmy_00842T0/1-342 ---------- ---------- ---------- ---------- ---------- BACU005144/1-552 ICDKARLKQQ KKACPNCHAA LELIPCRGHS GYPVTNFWRL DGNAIFFQAK 201 250 ENSP00000368805/1-506 GVHDHPRPES KSETEARRSA IKRQMASFYQ PQKKRIRESE AEENQDSSGH ENSBTAP00000025010/1-489 GVHDHPRPES KSETEARRSA IKRQMASFYQ PQKRRIREPE AGENQDHSRH ENSTTRP00000003446/1-507 GVHDHPRPES KSETEARRSA IKRQMASFYQ PQKKRIREPE AGENQDNGGH bmy_00842T0/1-342 ---------- ---------- ---------- ---------- AGENQDNGGH BACU005144/1-552 GVHDHPRPES KSETEARRSA IKRQMASFYQ PQKKRIREPE AGENQDNGGH 251 300 ENSP00000368805/1-506 FSNIPPLENP EDFDIVTETS FPIPGQPCPS FPKSDVYKAT CDLATFQGDK ENSBTAP00000025010/1-489 FNNIPSLENP EGLDVIPDAG FPVSGQHCLS FPNSDACKAT CDLTTFQGDI ENSTTRP00000003446/1-507 FSNIPSLENP EEFDIIPDTG FPVPGQPCFS FPNSDAYKAT CDLAAFQGDI bmy_00842T0/1-342 FSNIPSLENP EEFDIIPDTG FPVPGQPCFS FPNSDAYKAT CDLAAFQGDV BACU005144/1-552 FSNIPSLENP EEFDIIPDTG FPVPGQPCFS FPNSDAYKAT CDLAAFQGDV 301 350 ENSP00000368805/1-506 MPPFQKYSSP RIYLPRPPCS YELANPGYTN SSP-YPTLYK DSTSIPNDTD ENSBTAP00000025010/1-489 VPPFQKYSNP RIYLPRPPCS YELAGPGYAN SSP-YPTFYK DAGSIPKDSD ENSTTRP00000003446/1-507 VPPFQKYPNP RIFLPRPPCS YELAGPGYTN SGPYYPTLYK DASSIPDDTD bmy_00842T0/1-342 VPPFQKYPNP RIFLPRPPCS YELAGPGYTN SGP-YPTLXK DASSIPDDTD BACU005144/1-552 VPPFQKYPNP RIFLPRPPCS YELAGPGYTN SGP-YPTLYK DASSIPDDTD 351 400 ENSP00000368805/1-506 WVHLNTLQCN VNSYSSYERS FDFTNKQHGW KPALGKPSLV ERTNHGQFQA ENSBTAP00000025010/1-489 WVQLNALPYN VNTYSSFERS CDFTSNQHSW KPALGKAGPG ERMDQGQFPV ENSTTRP00000003446/1-507 WVHLNALQYN INSYGSFERS FDFTSKQPGW KPALGKADLG ESTDHGQFQA bmy_00842T0/1-342 WVHLNALQYN INSYGSFERN FDFTSKQPGW KPALGKADLG ESTDHGQFQA BACU005144/1-552 WVHLNALQYN INSYGSFERS FDFTSKQPGW KPALGKADLG ESTDHGQFQA 401 450 ENSP00000368805/1-506 MATRPYYNPE LPCRYLTTPP PGAPALQTVI TTTTKVSYQA YQPPAMKYSD ENSBTAP00000025010/1-489 EATHPQHTPQ PPCRYLATAP PAAPALQTVI TTTTRVSYQA CQPPTLKCCD ENSTTRP00000003446/1-507 TAARPYYNPE LPSRYLTTAP PSAPALQTVI TTTTKVSYQA YQPPALKCCD bmy_00842T0/1-342 VAARPYYNPE LPCRYLTTAP PAAPALQTVI TTTTKVSYQA YQPPALKCCD BACU005144/1-552 VATRPYYNPE LPCRYLTTAP PAAPALQTVI TTTTKVSYQA YQPPALKCCD 451 500 ENSP00000368805/1-506 SVREVKSLSS CNYAPEDTGM SVYPEPWGPP VTVTRAASPS GPPPMKIAGD ENSBTAP00000025010/1-489 NVRDAKSLSS C--------- ---------- APVVTTSSPT ASLPLKIPRD ENSTTRP00000003446/1-507 NVREVTSLSG CNYDSENTQM SIYLEDLDLP ATVAMAASPT ASLPLKIPGD bmy_00842T0/1-342 NVREVKSLSG CNYDSENTQM SIYPEDLDLP ATVAMAASPT ASLPLKIPGD BACU005144/1-552 NVREVKSLSG CNYDTENTQM SIYPEDLDLP ATVAMAASPT ASLPLKIPGD 501 550 ENSP00000368805/1-506 CRAIR-PTVA IPHEPVSSRT DEAETWDVCL SGLGSAVSYS DRVGPFFTYN ENSBTAP00000025010/1-489 CWTVRQHSLP YPLGAAPSRT DGAEAWEVCS SRLGSAANYS DRISPFFSCD ENSTTRP00000003446/1-507 CRTIR-HTLP FPQDSAPSWT DGAETWDVCP SGPGSTIGYS ERISPFFSYD bmy_00842T0/1-342 CRAIR-HTLP FPQDSAPSWT DVAETWDVCP SGPGSTIGYS ERISPFFSYD BACU005144/1-552 CRAIR-HTLP FPQDSAPSWT DGAETWDVCP SGLGSTIGYS GRISPFFSYD 551 600 ENSP00000368805/1-506 NEDF ENSBTAP00000025010/1-489 NEDF ENSTTRP00000003446/1-507 HEDF bmy_00842T0/1-342 HEDF BACU005144/1-552 HEDF