KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:36 2014 Check: 00 .. Name: BACU008677/1-890 Len: 894 Check: 7080 Weight: 1.00 Name: ENSP00000382341/1-567 Len: 894 Check: 2587 Weight: 1.00 Name: bmy_16964T0/1-519 Len: 894 Check: 2009 Weight: 1.00 Name: ENSTTRP00000008186/1-565 Len: 894 Check: 3025 Weight: 1.00 Name: ENSBTAP00000025020/1-567 Len: 894 Check: 9784 Weight: 1.00 // 1 50 BACU008677/1-890 MPAPMKGQVC VVTGASRGIG RGIALQLCQA GATVYITGRH LDTLQATAQE ENSP00000382341/1-567 ---------- ---------- ---------- -----MHGR- ---LKVKTSE bmy_16964T0/1-519 ---------- ---------- ---------- ------HGR- ---LKVKTSE ENSTTRP00000008186/1-565 ---------- ---------- ---------- -----MHGR- ---LKVKTSE ENSBTAP00000025020/1-567 ---------- ---------- ---------- -----MHGR- ---LKVKTSE 51 100 BACU008677/1-890 AQSRGGRCVP VVCDSSQESE VRSLFEQVDR EQQGRLDVLV NNAYAGVQAI ENSP00000382341/1-567 EQAEAKR--- ---------- -------LER EQKLKL---- ---------- bmy_16964T0/1-519 EQEEAKR--- ---------- -------LER EQKLKL---- ---------- ENSTTRP00000008186/1-565 EQAEAKR--- ---------- -------LER EQKLKL---- ---------- ENSBTAP00000025020/1-567 EQAEAKR--- ---------- -------LER EQKLKL---- ---------- 101 150 BACU008677/1-890 LNNTKKAFWE SPASIWDDIN NVGLRMWPQA LDSPGLQPSP GSEAIRGQKK ENSP00000382341/1-567 ---------- ---------- ---------- ---------- ---------- bmy_16964T0/1-519 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008186/1-565 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025020/1-567 ---------- ---------- ---------- ---------- ---------- 151 200 BACU008677/1-890 LPETALNVVH SFFFAPPSRG HYLCSVYGAR LMVPAGQGLI VVISSAGGLQ ENSP00000382341/1-567 ---------- ---------- ---------- ---------- ---------- bmy_16964T0/1-519 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008186/1-565 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025020/1-567 ---------- ---------- ---------- ---------- ---------- 201 250 BACU008677/1-890 YFFNVPYGVG KAACDRLAAD CARELRRHGV SYVSLWPGLV QTELLKEHMM ENSP00000382341/1-567 ---------- ---------- ---------- -----YQSAT QAVFQK---- bmy_16964T0/1-519 ---------- ---------- ---------- -----YQSAT RT-------- ENSTTRP00000008186/1-565 ---------- ---------- ---------- -----YQSAT QTVFQK---- ENSBTAP00000025020/1-567 ---------- ---------- ---------- -----YQAAT QTVFQK---- 251 300 BACU008677/1-890 KEENTADPLV EQFRFRFSSA ETTEMSGKCV VALATDPNIL SLSGKVLPSC ENSP00000382341/1-567 ---------- ---------- ---------- ---------- ---------- bmy_16964T0/1-519 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008186/1-565 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025020/1-567 ---------- ---------- ---------- ---------- ---------- 301 350 BACU008677/1-890 DLARRYGLQD VDGVPRDVAL TNWLTQNKVM EADLNHGISD ASFRDESRRR ENSP00000382341/1-567 ---------- ---------- ---------- ---------- ---------- bmy_16964T0/1-519 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008186/1-565 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025020/1-567 ---------- ---------- ---------- ---------- ---------- 351 400 BACU008677/1-890 TSHRLLKVPV GDRQAGELDE SVLELTSQIL GANPDFATLW NCRREVLQRL ENSP00000382341/1-567 ---------- --RQAGELDE SVLELTSQIL GANPDFATLW NCRREVLQQL bmy_16964T0/1-519 ---------- --RQAGELDE SVLELTSQIL GANPDFATLW NCRREVLQRL ENSTTRP00000008186/1-565 ---------- --RQAGELDE SVLELTSQIL GANPDFATLW NCRREVLQRL ENSBTAP00000025020/1-567 ---------- --RQAGELDE SVLELTSQIL GANPDFATLW NCRREVLQQL 401 450 BACU008677/1-890 EVQKSPEELA TLVKAELGFL ESCLRVNPKS YGTWHHRCWL LGRLPEPNWA ENSP00000382341/1-567 ETQKSPEELA ALVKAELGFL ESCLRVNPKS YGTWHHRCWL LGRLPEPNWT bmy_16964T0/1-519 EVQKSPEELA TLVKAELGFL ESCLRVNPKS YGTWHHRCWL LGRLPEPNWA ENSTTRP00000008186/1-565 EVQKSPEELA ALVKAELGFL ESCLRVNPKS YGTWHHRCWL LGRLPEANWA ENSBTAP00000025020/1-567 EVQKSPEELA TLVKAELGFL ESCLRVNPKS YGTWHHRCWL LSRLPEPNWA 451 500 BACU008677/1-890 RELELCARFL EVDERNFHCW DYRRFVAAQA AVPPAEELAF TDSLITRNFS ENSP00000382341/1-567 RELELCARFL EVDERNFHCW DYRRFVATQA AVPPAEELAF TDSLITRNFS bmy_16964T0/1-519 RELELCARFL EVDERNFHCW DYRRFVAAQA AVPPAEELAF TDSLITRNFS ENSTTRP00000008186/1-565 RELELCARFL EVDERNFHCW DYRRFVAAQA AVPPAEELAF TDSLITRNFS ENSBTAP00000025020/1-567 RELELCARFL EVDERNFHCW DYRRFVAAQA AVPPAEELAF TDSLITRNFS 501 550 BACU008677/1-890 NYSSWHYRSC LLPQLHPQPD SGPQGRLPED VLLKELELVQ NAFFTDPNDQ ENSP00000382341/1-567 NYSSWHYRSC LLPQLHPQPD SGPQGRLPED VLLKELELVQ NAFFTDPNDQ bmy_16964T0/1-519 NYSSWHYRSC LLPQLHPQPD SGPQGRLPED VLLKELELVQ NAFFTDPNDQ ENSTTRP00000008186/1-565 NYSSWHYRSC LLPQLHPQPD SGPQGRLPED VLLKELELVQ NAFFTDPNDQ ENSBTAP00000025020/1-567 NYSSWHYRSC LLPQLHPQPD SGPQGRLPED VLLKELELVQ NAFFTDPNDQ 551 600 BACU008677/1-890 SAWFYHRWLL GRADPQDALR CLHVSRDEAC LTVSFSRPLL VGSRTETLLL ENSP00000382341/1-567 SAWFYHRWLL GRADPQDALR CLHVSRDEAC LTVSFSRPLL VGSRMEILLL bmy_16964T0/1-519 SAWFYHRWLL GRADPQDALR CLHVSRDEAC LTVSFSRPLL VGSRTETLLL ENSTTRP00000008186/1-565 SAWFYHRWLL GRADPQDALH CLHVSRDEAC LTVSFSRPLL VGSRTETLLL ENSBTAP00000025020/1-567 SAWFYHRWLL GRADPQDALR CLHVSRDEAC LTVSFSRPLL VGSGMETLLL 601 650 BACU008677/1-890 MVDESPLAVA WRTPDGRNRP SHVWLCDLPA TSLNDQLPQH TFRVIWTAGD ENSP00000382341/1-567 MVDDSPLIVE WRTPDGRNRP SHVWLCDLPA ASLNDQLPQH TFRVIWTAGD bmy_16964T0/1-519 MVDESPLAVA WRTPDGRNRP SHVWLCDLPA TSLNDQLPQH TFRVIWTAGD ENSTTRP00000008186/1-565 MVDESPLAVA WRTPDGRNRP SHVWLCDLPA TSLNDQLPQH TFRVIWTAGG ENSBTAP00000025020/1-567 MVDESPLAVE WRTPEGRNRP SHIWLCDLPA TSLNDQLPQH TFRVIWTAGD 651 700 BACU008677/1-890 AQKECVLLKG RQEGWCRDSA TDEQLFRCEL SVEKSTVLQS ELESCKELQE ENSP00000382341/1-567 VQKECVLLKG RQEGWCRDST TDEQLFRCEL SVEKSTVLQS ELESCKELQE bmy_16964T0/1-519 AQKECVLLKG RQEGWCRDSA TDEQLFRVPA ---------- ----HHHLAD ENSTTRP00000008186/1-565 AQKECVLLKG RQEGWCRDSA TDEQLFRCEL SVEKSTVLQS ELESCKELQE ENSBTAP00000025020/1-567 AQKECVLLKG RQEGWCRDSA TDEQLFRCEL SVEKSTVLQS ELESCKELQE 701 750 BACU008677/1-890 LEPENKWCLL TIILLMRALD PLQYEKETLQ YFQTLKASRA VDPMRAAYLD ENSP00000382341/1-567 LEPENKWCLL TIILLMRALD PLLYEKETLQ YFQTLK---A VDPMRATYLD bmy_16964T0/1-519 AGAG------ ---------P PA-------- ---------A VDPMRAAYLD ENSTTRP00000008186/1-565 LEPENKWCLL TIILLMRALD PLQYEKETLQ YFQTLK---A VDPMRAAYLD ENSBTAP00000025020/1-567 LEPENKWCLL TIILLMRALD PLQYEKETLQ YFQTLK---A VDPMRAAYLD 751 800 BACU008677/1-890 DLRSKFLLEN SVLKMEYAEV RVLHLGHKDL TVLCHLEQLL LITHLDLSHN ENSP00000382341/1-567 DLRSKFLLEN SVLKMEYAEV RVLHLAHKDL TVLCHLEQLL LVTHLDLSHN bmy_16964T0/1-519 DLRSKFLLEN SVLKMEYAEV RVLHLGHKDL TVLCHLEQLL LITHLDLSHN ENSTTRP00000008186/1-565 DLRSKFLLEN SVLKMEYAEV RVLHLGHKDL TVLCHLEQLL LITHLDLSHN ENSBTAP00000025020/1-567 DLRSKFLLEN SVLKMEYAEV RVLHLGHKDL TVLCHLEQLL LVTHLDLSHN 801 850 BACU008677/1-890 RLRALPPALA ALRCLEVLQA NDNTIESLDG VTNLPRLQEL FLCNNRILPS ENSP00000382341/1-567 RLRTLPPALA ALRCLEVLQA SDNAIESLDG VTNLPRLQEL LLCNNRLQQP bmy_16964T0/1-519 RLRALPPALA ALRCLEVLQA NDNTIESLDG VTNLPRLQEL FLCNNRLQQP ENSTTRP00000008186/1-565 RLRALPPALA ALRCLEVLQA NDNTIESLDG VTNLPRLQEL FLCNNRLQQ- ENSBTAP00000025020/1-567 RLRALPPALA ALRCLEVLQA NDNAIESLDG VTNLPRLQEL ILCNNRLQQP 851 900 BACU008677/1-890 GCL----SDS RLVLLNLQGN PLCQAVGISE HLAELLPSVR SSLT ENSP00000382341/1-567 AVLQPLASCP RLVLLNLQGN PLCQAVGILE QLAELLPSVS SVLT bmy_16964T0/1-519 AVLQPLASCP RLVLLNLQGN PLCQAVGISE HLADLLPSVC NSLT ENSTTRP00000008186/1-565 AVLQPLASCP RLVLLNL-GN PLCQAVGISE HLAELLPSVR SSLT ENSBTAP00000025020/1-567 AVLQPLTSCP RLTLLNLQGN PLCQAEGSSE HLAELLPSVS SILT