KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:37 2014 Check: 00 .. Name: ENSTTRP00000003259/1-278 Len: 283 Check: 9004 Weight: 1.00 Name: bmy_20964T0/1-189 Len: 283 Check: 2023 Weight: 1.00 Name: BACU001777/1-272 Len: 283 Check: 5272 Weight: 1.00 Name: ENSP00000350331/1-278 Len: 283 Check: 9584 Weight: 1.00 Name: ENSBTAP00000025032/1-278 Len: 283 Check: 9299 Weight: 1.00 // 1 50 ENSTTRP00000003259/1-278 METRAADGSF LGDLGFWVER TPVHEAAQRG ETRQLQQLIE SGACVNQVMV bmy_20964T0/1-189 -------MCF FPG--FWVER TPVHEAAQRG ETRQLQQLIE SGACVNQVMV BACU001777/1-272 MDDRG----- -GGKGFWVER TPVHEAAQRG ETRQLQQLIE SGACVNQVMV ENSP00000350331/1-278 MEPRAADGCF LGDVGFWVER TPVHEAAQRG ESLQLQQLIE SGACVNQVTV ENSBTAP00000025032/1-278 MEPRASDSSF LGDVGFWVER TPVHEAAQRG ETRQLQQLIE SGACVNQVTV 51 100 ENSTTRP00000003259/1-278 DSITPLHAAS LQGQAQCVQL LLAAGAQXXX XXXXXXXXXX XXXXXXXXXX bmy_20964T0/1-189 DSITPLHAAS LQGQAQCVQL LLAAGAQVDA RNIDGSTPLC DACASGSIEC BACU001777/1-272 DSITPLHAAS LQGQAQCVQL LLAAGAQVDA RNIDGSTPLC DACASGSIEC ENSP00000350331/1-278 DSITPLHAAS LQGQARCVQL LLAAGAQVDA RNIDGSTPLC DACASGSIEC ENSBTAP00000025032/1-278 DSITPLHAAS LQGQVQCVQL LLAAGAQVDA RNIDGSTPLC DACASGSVEC 101 150 ENSTTRP00000003259/1-278 XXXXXXXXXX XXXXXXXXXX XXXXXXXXSS ECVRLLIDVG ANLEAHDCHF bmy_20964T0/1-189 VKLLLSHGAK VNPPLYTASP LHEACMS--- ---------- ---------- BACU001777/1-272 VKLLLSHGAK VNPPLYTASP LHEACMSGSS ECVRLLIDVG ANLEAHDCHF ENSP00000350331/1-278 VKLLLSYGAK VNPPLYTASP LHEACMSGSS ECVRLLIDVG ANLEAHDCHF ENSBTAP00000025032/1-278 VKLLLSYGAK VNPPLYTASP LHEACMSGSS ECVRLLIDVG ANLEAHDCHF 151 200 ENSTTRP00000003259/1-278 GTPLHVACAR EHLDCVKMLL NAGANVNAAK LHETALHHAA KVKNVDLIEM bmy_20964T0/1-189 ---------- ---------- --GANVNAAK LHETALHHAA KVKNVDLIEM BACU001777/1-272 GTPLHVACAR EHLDCVKMLL NAGANVNAAK LHETALHHAA KVKNVDLIEM ENSP00000350331/1-278 GTPLHVACAR EHLDCVKVLL NAGANVNAAK LHETALHHAA KVKNVDLIEM ENSBTAP00000025032/1-278 GTPLHVACAR EHLDCVKVLL NAGANVNAAK LHETALHHAA KVKNVDLIEM 201 250 ENSTTRP00000003259/1-278 LIQFGGNIYA RDNRGRKPSD YTWSSSASAK CLEHYEKTPL SLSQLCRVSL bmy_20964T0/1-189 LIQFGGNIYA RDNRGRKPSD YTWSSSAPAK CLEHYESECV SFV------- BACU001777/1-272 LIQFGGNIYA RDNRGRKPSD YTWSSSASAK CLEHYENAAK RLT-----SG ENSP00000350331/1-278 LIEFGGNIYA RDNRGKKPSD YTWSSSAPAK CFEYYEKTPL TLSQLCRVNL ENSBTAP00000025032/1-278 LIQFGGNIYA RDNRGRKPSD YTWASSAPAR CLEHYEKTPL SLSQLCRVSL 251 300 ENSTTRP00000003259/1-278 RRAAGVRGLE KIARLNIPPR LIDYLSYN-- --- bmy_20964T0/1-189 ---------- ---------- ---------- --- BACU001777/1-272 SEHCNCMDLV RTDGSDHSPG VNHYFPQDVP SDG ENSP00000350331/1-278 RKATGVRGLE KIAKLNIPPR LIDYLSYN-- --- ENSBTAP00000025032/1-278 RRAAGVRGLE KIARLDIPPR LIDFLSYN-- ---