KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:45 2014 Check: 00 .. Name: ENSP00000351732/1-906 Len: 1465 Check: 486 Weight: 1.00 Name: ENSBTAP00000025041/1-903 Len: 1465 Check: 3126 Weight: 1.00 Name: BACU016877/1-1403 Len: 1465 Check: 6823 Weight: 1.00 Name: bmy_07649T0/1-629 Len: 1465 Check: 4476 Weight: 1.00 Name: ENSTTRP00000002075/1-647 Len: 1465 Check: 671 Weight: 1.00 // 1 50 ENSP00000351732/1-906 MSHQVKGLKE EARGGVKGRV KSGSPHTGDR LGRRSSSKRA LKAEGTPGRR ENSBTAP00000025041/1-903 MSHQLKGQGE EGGGGTRGRA RSGSLGTGDR SRRSPSMKRP HRAEKAPVPR BACU016877/1-1403 ---------- ---------- -------GDR SGRRPSRKRT YKAKNAPGRR bmy_07649T0/1-629 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002075/1-647 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000351732/1-906 GAQRSQKERA GGSPSPGSPR RKQTGRR-RH REELGEQERG EAERTCEGRR ENSBTAP00000025041/1-903 RAQPGQKKRT GGSPGSGSPR RKQAERRGR- RELLGDRERG SAEKTCGGRR BACU016877/1-1403 QAPPGQKEQA GGSPGSGSPR RKQAERRGRH REQLGERERG SAEKTCGGRR bmy_07649T0/1-629 ---------- ---------- --------MS LKEVPHLEGG DKEGTEAPYR ENSTTRP00000002075/1-647 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000351732/1-906 KRDERASFQE RTAAPKREKE IPRREEKSKR QKKPRSSSLA SSASGGESLS ENSBTAP00000025041/1-903 K-DGRASLRE QRAPSKKEKE VRRKEEMWKQ LKKHRSSSVA SSTSSGESLS BACU016877/1-1403 KRDGRASLRE HQAPPKKEKE VPRKEEMWKQ LKKHRSSSSA SSTSGGEPLS bmy_07649T0/1-629 MDPKKLAVSI ITVRPVVLFA VNGPQNLHSA L-----GSAL CSPKGSLGI- ENSTTRP00000002075/1-647 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000351732/1-906 EEELAQILEQ VEEKKKLIAT MRSKPWPMAK KLTELREAQE FVEKYEGALG ENSBTAP00000025041/1-903 EEELARILEQ VEDKKKLIAS MRSKPWPMAR KLAELREAQE FVEKYEGALG BACU016877/1-1403 EEELARILEQ VEDKKKLIAT MRTKPWPMAT KLAELREAQE FVEKYEGALG bmy_07649T0/1-629 ---------- ---------- -----WT--- -----QEAQE FVEKYEGALG ENSTTRP00000002075/1-647 ---------- ---------- ---------- ------EAQE FVEKYEGALG 201 250 ENSP00000351732/1-906 KGKGKQLYAY KMLMAKKWVK FKRDFDNFKT QCIPWEMKIK DIESHFGSSV ENSBTAP00000025041/1-903 KGKGKRLYAY RMLMAKKWVK FKRDFHNFKT QCIPWEMKIK DIESHFGSSV BACU016877/1-1403 KGKGKRLYAY RMLMAKKWVK LKRDFDNFKT QCIPWEMKIK DIESHFGSSV bmy_07649T0/1-629 KGKGKRLYAY RMLMAKKWVK FKRDFDNFKT QCIPWEMKIK DIESHFGSSV ENSTTRP00000002075/1-647 KGKGKRLYAY RMLMAKKWVK FKRDFDNFKT QCIPWEMKIK DIESHFGSSV 251 300 ENSP00000351732/1-906 ASYFIFLRWM YGVNLVLFGL IFGLVIIPEV LMGMPYGSIP RKTVPRAEEE ENSBTAP00000025041/1-903 ASYFIFLRWM YGVNLVLFGL IFGLVIIPEV LMGMPYGSIP RKTVPRAEEE BACU016877/1-1403 ASYFIFLRWM YGVNLVLFGL IFGLVIIP-- ---------- ---------- bmy_07649T0/1-629 ASYFIFLRWM YGVNLVLFGL IFGLVIIP-- ---------- ---------- ENSTTRP00000002075/1-647 ASYFIFLRWM YGVNLVLFGL IFGLVIIPEV LMGMPYGSIP RKTVPRAEEE 301 350 ENSP00000351732/1-906 KAMDFSVLWD FEGYIKYSAL FYGYYNNQRT IGWLRYRLPM AYFMVGVSVF ENSBTAP00000025041/1-903 KAMDFSVLWD FEGYMKYSAL FYGYYNNQRT IGWLRYRLPM AYFMVGVSVF BACU016877/1-1403 ---------- -EGYIKYSAL FYGYYNNQRT IGWLRYRLPM AYFMVGISVF bmy_07649T0/1-629 ---------- -EGYIKYSAL FYGYYNNQRT IGWLRYRLPM AYFMVGVSVF ENSTTRP00000002075/1-647 KAMDFSVLWD FEGYIKYSAL FYGYYNNQRT IGWLRYRLPM AYFMVGVSVF 351 400 ENSP00000351732/1-906 GYSLIIVIRS MASNTQGSTG EGESDNFTFS FKMFTSWDYL IGNSETADNK ENSBTAP00000025041/1-903 GYSLMIVIRS MASNNQGSTS EGESDNFTFS FKMFTSWDYL IGNSETADNK BACU016877/1-1403 GYSLMIIIRS MAGNTQGSTN DGESDNFTFS FKMFTSWDYL IGNSETADNK bmy_07649T0/1-629 GYSLMIVIRS MASNTQGSTN DGESDNFTFS FKMFTSWDYL IGNSETADNK ENSTTRP00000002075/1-647 GYSLMIVIRS MAGNTQGSTN DGESDNFTFS FKMFTSWDYL IGNSETADNK 401 450 ENSP00000351732/1-906 YASITTSFKE SIVDEQESNK EENIHLTRFL RVLANFLIIC CLCGSGYLIY ENSBTAP00000025041/1-903 YASITTSFKE SIVDEQESNK EENVHLTRFL RVLANFLIIC CLCGSGYLIY BACU016877/1-1403 YASITISFKE SIVDEQESNK EENVHLTRFL RVLANFLIIC CLCGSGYLIY bmy_07649T0/1-629 YASITISFKE SIVDEQESNK EENVHLTRFL RVLANFLIIC CLCGSGYLIY ENSTTRP00000002075/1-647 YASITISFKE SIVDEQESNK EENVHLTRFL RVLANFLIIC CLCGSGYLIY 451 500 ENSP00000351732/1-906 FVVKRSQQFS KMQNVSWYER NEVEIVMSLL GMFCPPLFET IAALENYHPR ENSBTAP00000025041/1-903 FVVKRSQEFS KMQNVSWYER NEVEIVMSLL GMFCPPLFET IAALENYHPR BACU016877/1-1403 FVVKRSQEFS KMQNVSWYER NEVEIVMSLL GMFCPPLFET IAALENYHPR bmy_07649T0/1-629 FVVKRSQEFS KMQNVSWYER NEVEIVMSLL GMFCPPLFET IAALENYHPR ENSTTRP00000002075/1-647 FVVKRSQEFS KMQNVSWYER NEVEIVMSLL GMFCPPLFET IAALENYHPR 501 550 ENSP00000351732/1-906 TGLKWQLGRI FALFLGNLYT FLLALMDDVH LKLANEETIK NITHWTLFNY ENSBTAP00000025041/1-903 IGLKWQLGRI FALFLGNLYT FLLALMDDIQ LKLSNEETIK NITHWTLFHY BACU016877/1-1403 IGLKWQLGRI FALFLGNLYT FLLALMDDIH LKLSNEETIK NITHWTLFHY bmy_07649T0/1-629 IGLKWQLGRI FALFLGNLYT FLLALMDDVH LKLSNEETIK NITHWTLFHY ENSTTRP00000002075/1-647 IGLKWQLGRI FALFLGNLYT FLLALMDDVH LKLSNEETIK NITHWTLFHY 551 600 ENSP00000351732/1-906 YNSSGWNESV PRPPLHPADV PRGSCWETAV GIEFMRLTVS DMLVTYITIL ENSBTAP00000025041/1-903 YNSSGWNESV PRPPLHPADV PRGSCWETAV GIEFMRLTVS DMLVTYITIL BACU016877/1-1403 YNSSGWNESV PRPPLRPADV PRGSCWETAV GIEFMRLTVS DMLVTCITIL bmy_07649T0/1-629 YNSSGWNESV PRPPLRPADV PRGSCWETAV GIEFMRLTVS DMLVTCITIL ENSTTRP00000002075/1-647 YNSSGWNESV PRPPLHPADV PRGSCWETAV GIEFMRLTVS DMLVTCITIL 601 650 ENSP00000351732/1-906 LGDFLRACFV RFMNYCWCWD LEAGFPSYAE FDISGNVLGL IFNQGMIWMG ENSBTAP00000025041/1-903 LGDFLRACFV RFMNYCWCWD LEAGFPSYAE FDISGNVLGL IFNQGMIWMG BACU016877/1-1403 LGDFLRACFV RFMNYCWCWD LEAGFPSYAE FDISGNVLGL IFNQGMIWMG bmy_07649T0/1-629 LGDFLRACFV RFMNYCWCWD LEAGFPSYAE FDISGNVLGL V--------- ENSTTRP00000002075/1-647 LGDFLRACFV RFMNYCWCWD LEAGFPSYAE FDISGNVLGL IFNQGMIWMG 651 700 ENSP00000351732/1-906 SFYAPGLVGI NVLRLLTSMY FQCWAVMSSN VPHERVFKAS RSNNFYMGLL ENSBTAP00000025041/1-903 SFYAPGLVGI NVLRLLTSMY FQCWAVMSSN VPHERVFKAS RSNNFYMGLL BACU016877/1-1403 SFYAPGLVGI NVLRLLTSMY FQCWAVMSSN VPHERVFKAS RSNNFYMGLL bmy_07649T0/1-629 --------GI NVLRLLTSMY FQCWAVMSSN VPHERVFKAS RSNNFYMGLL ENSTTRP00000002075/1-647 SFYAPGLVGI NVLRLLTSMY FQCWAVMSSN VPHERVFKAS RSNNFYMGLL 701 750 ENSP00000351732/1-906 LLVLFLSLLP VAYTIMSLPP SFDCGPFSGK NRMYDVLQET IENDFPTFLG ENSBTAP00000025041/1-903 LLVLFLSLLP VAYTIMSLPP SFDCGPFSGK NRMYDVIQET VENDFPTFLG BACU016877/1-1403 LLVLFLSLLP VAYTVMSLPP SFDCGPFSGK NRMYDVIQET VENDFPTFLG bmy_07649T0/1-629 LLVLFLSLLP VAYTVMSLPP SFDCGPFSGK KRMYDVIQET VENDFPTFLG ENSTTRP00000002075/1-647 LLVLFLSLLP VAYTVMSLPP SFDCGPFSGK NRMYDVIQET VENDFPTFLG 751 800 ENSP00000351732/1-906 KIFAFLANPG LIIPAILLMF LAIYYLNSVS KSLSRANAQL RKKIQVLREV ENSBTAP00000025041/1-903 KIFAFLANPG LIIPAILLMF LAIYYLNSVS KSLSRANAQL RKKIQALREV BACU016877/1-1403 KIFAFLANPG LIIPAILLMF LAIYYLNSVS KSLSRANAQL RKKIQALHEV bmy_07649T0/1-629 KIFAFFANPG LIIPAILLMF LAIYYLNSVS KSLSRANAQL RKKIQA---- ENSTTRP00000002075/1-647 KIFAFLANPG LIIPAILLMF LAIYYLNSVS KSLSRANAQL RKKIQALREV 801 850 ENSP00000351732/1-906 EKSHKSVKGK ATARDSEDTP KSSSKNATQL QLTKEETTPP SASQSQAMDK ENSBTAP00000025041/1-903 EKSHKSVKGR ATARDSEDTD KNNSKNDT-- QLTKEGTAHH SASQSLTLDQ BACU016877/1-1403 EKSHKSFKGR ATARDSEDTA KGNSKNAT-- QLTKEGTAHH PASPSQTLDQ bmy_07649T0/1-629 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002075/1-647 EKSHKSFKGR ATARDSEDTA KRNSKNAT-- QLTKE----- ---------- 851 900 ENSP00000351732/1-906 KAQGPGTSNS ASRTTLPASG ---------- ---------- ---------- ENSBTAP00000025041/1-903 KAQGPGASSS AGKTVLPASQ ---------- ---------- ---------- BACU016877/1-1403 KAQGSRASSS AGRTVSPASQ VLLHVLFEHA VGYALLALKE VEEKSLLLPQ bmy_07649T0/1-629 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002075/1-647 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000351732/1-906 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025041/1-903 ---------- ---------- ---------- ---------- ---------- BACU016877/1-1403 VEECVLNLGK FHNIVRLVAF CPFSSSQVAL ENANAVSEGV VHEDLRLLLE bmy_07649T0/1-629 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002075/1-647 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000351732/1-906 -HLPISRP-- ---------- ---------- ---------- ---------- ENSBTAP00000025041/1-903 -HLPVSRA-- ---------- ---------- ---------- ---------- BACU016877/1-1403 THLPTKKKKV LLGVGDPKIG AAIQEELGYN CQTGGVIAEI LRGVRLHFHN bmy_07649T0/1-629 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002075/1-647 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000351732/1-906 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025041/1-903 ---------- ---------- ---------- ---------- ---------- BACU016877/1-1403 LVKGLTDLSA CKAQLGLGHS YSRAKVKFNV NRVDNMIIQS ISLLDQLDKD bmy_07649T0/1-629 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002075/1-647 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSP00000351732/1-906 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025041/1-903 ---------- ---------- ---------- ---------- ---------- BACU016877/1-1403 INTFSMRVRE WYGYHFPELV KIINDNATYC RLAQFIGNRR ELNEEKLEKL bmy_07649T0/1-629 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002075/1-647 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSP00000351732/1-906 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025041/1-903 ---------- ---------- ---------- ---------- ---------- BACU016877/1-1403 EELTMDAAKA KAILDASRSS MGMDISAIDL INIESFSSRV VSLSEYRQSL bmy_07649T0/1-629 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002075/1-647 ---------- ---------- ---------- ---------- ---------- 1151 1200 ENSP00000351732/1-906 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025041/1-903 ---------- ---------- ---------- ---------- ---------- BACU016877/1-1403 HTYLRSKMSQ VAPSLSALIG EAVGARLIAH AGSLTNLAKY PASTVQILGA bmy_07649T0/1-629 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002075/1-647 ---------- ---------- ---------- ---------- ---------- 1201 1250 ENSP00000351732/1-906 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025041/1-903 ---------- ---------- ---------- ---------- ---------- BACU016877/1-1403 EKALFRALKT RGNTPKYGLI FHSTFIGRAA AKNKGRISRY LANKCSIASR bmy_07649T0/1-629 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002075/1-647 ---------- ---------- ---------- ---------- ---------- 1251 1300 ENSP00000351732/1-906 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025041/1-903 ---------- ---------- ---------- ---------- ---------- BACU016877/1-1403 IDCFSEVPTS VFGEKLREQV EERLSFYETG EIPRKNLDVM KEAMVQAEEA bmy_07649T0/1-629 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002075/1-647 ---------- ---------- ---------- ---------- ---------- 1301 1350 ENSP00000351732/1-906 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025041/1-903 ---------- ---------- ---------- ---------- ---------- BACU016877/1-1403 AAEITRKLEK QEKKRLKKEK KRLAAIALAS SENSSSTPEE CEETSERPKK bmy_07649T0/1-629 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002075/1-647 ---------- ---------- ---------- ---------- ---------- 1351 1400 ENSP00000351732/1-906 ---------- ---------- ---------- ---------- -----PGIGP ENSBTAP00000025041/1-903 ---------- ---------- ---------- ---------- -----PGVRP BACU016877/1-1403 KKKQKPQEAP QENGMEDPSV SSKPKKKKSF SKGELVSSDL EETAGSGSLP bmy_07649T0/1-629 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002075/1-647 ---------- ---------- ---------- ---------- ---------- 1401 1450 ENSP00000351732/1-906 DSGHAPSQTH PWRSASGKSA QRPPH----- ---------- ---------- ENSBTAP00000025041/1-903 DSGQARPQAH PWRSTSGKRA WRPPH----- ---------- ---------- BACU016877/1-1403 KRKKSFPKEE PDSDPEESGN KRVPKKKRKF SSKEEPLSSG PEEAAASKSS bmy_07649T0/1-629 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002075/1-647 ---------- ---------- ---------- ---------- ---------- 1451 1500 ENSP00000351732/1-906 ---------- ----- ENSBTAP00000025041/1-903 ---------- ----- BACU016877/1-1403 SSKKKKKLRK LSQEN bmy_07649T0/1-629 ---------- ----- ENSTTRP00000002075/1-647 ---------- -----