KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:51 2014 Check: 00 .. Name: ENSP00000228476/1-347 Len: 350 Check: 8461 Weight: 1.00 Name: ENSBTAP00000025068/1-350 Len: 350 Check: 9643 Weight: 1.00 Name: ENSTTRP00000003830/1-347 Len: 350 Check: 621 Weight: 1.00 Name: bmy_08270T0/1-287 Len: 350 Check: 1773 Weight: 1.00 Name: BACU018838/1-347 Len: 350 Check: 9506 Weight: 1.00 // 1 50 ENSP00000228476/1-347 ---MRVVVIG AGVIGLSTAL CIHERYHSVL QPLDIKVYAD RFTPLTTTDV ENSBTAP00000025068/1-350 AGTMRVVVIG AGVIGLSTAL CIHERYRSVL KSLDVMVYAD RFTPLTTTDV ENSTTRP00000003830/1-347 ---MRVVVIG AGVIGLSTAL CIHERYHSVL QSLDVKVYAE RFTPLTNTDV bmy_08270T0/1-287 ---MRVVVIG AGVIGLSTAL CIHERYHSVL QSLDVKVYAE RFTPLTNTDV BACU018838/1-347 ---MRVVVIG AGVIGLSTAL CIHERYHSVL QSLDVKVYAE RFTPLTNTDV 51 100 ENSP00000228476/1-347 AAGLWQPYLS DPNNPQEADW SQQTFDYLLS HVHSPNAENL GLFLISGYNL ENSBTAP00000025068/1-350 AAGLWQPYLS EPSNPQEAHW NQQTFNYLLS LIGSPNAANM GLAPVSGYNL ENSTTRP00000003830/1-347 AAGLWQPYLS EPSNPQEARW NQQTFNYLLS HIGSPNAADM GLAPVSGYNL bmy_08270T0/1-287 AAGLWQPYLS EPSNPQEAHW NQQTFNHLLS HIGSPNAADM GLAPVSGYNL BACU018838/1-347 AAGLWQPYLS EPSNPQEAHW NQQTFNYLLS HIGSPNAADM GLAPVSGYNL 101 150 ENSP00000228476/1-347 FHEAIPDPSW KDTVLGFRKL TPRELDMFPD YGYGWFHTSL ILEGKNYLQW ENSBTAP00000025068/1-350 FREAVPDPYW KDIVLGFRKL TLRELDMFPD YSYGWFNTSL ILEGRKYLQW ENSTTRP00000003830/1-347 FREAVPDPYW KDVVLGFRKL TPRELDMFPD YSYGWFNTSL ILEGRKYLQW bmy_08270T0/1-287 FREAVP---- -DVVLGFRKL TPRELDMFPD Y--------- ---------- BACU018838/1-347 FHEAVPDPYW KDVVLGFRKL TPRELDMFPD YSYGWFNTSL ILEGRKYLQW 151 200 ENSP00000228476/1-347 LTERLTERGV KFFQRKVESF EEVAREGADV IVNCTGVWAG ALQRDPLLQP ENSBTAP00000025068/1-350 LTERLTERGV KFFLWKVESF EEVVREGADV IINCTGVWAG ALQPDPLLQP ENSTTRP00000003830/1-347 LTERLTERGV KFLLRKVESF EEVARGDADV IINCTGVWAG ALQPDPLLQP bmy_08270T0/1-287 ---RLTERGV KFLLRKVESF EEVARGGADV IINCTGVWAG ALQPDPLLQP BACU018838/1-347 LTERLTERGV KFLLRKVESF EEVARGGADV IINCTGVWAG ALQPDPLLQP 201 250 ENSP00000228476/1-347 GRGQIMKVDA PWMKHFILTH DPERGIYNSP YIIPGTQTVT LGGIFQLGNW ENSBTAP00000025068/1-350 GRGQIIKVDA PWLKHFVITH DPERGIYKSP YIIPGLQAIT LGGIFQLGNW ENSTTRP00000003830/1-347 GRGQTIKVDA PWMKHFIITH DPERGIYKSP YIIPGIQAVT LGGIFQLGNW bmy_08270T0/1-287 GRGQIIKVDA PWMKHFIITH DPERGIYKSP YIIPGIQAVT LGGIFQLGNW BACU018838/1-347 GRGQIIKVDA PWMKHFIITH DPERGIYKSP YIIPGIQAVT LGGIFQLGNW 251 300 ENSP00000228476/1-347 SELNNIQDHN TIWEGCCRLE PTLKNARIIG ERTGFRPVRP QIRLEREQLR ENSBTAP00000025068/1-350 SETSNIPDHN TIWEGCCRLE PTLKDAKIIG EWSGFRPVRP QVRLEREQLR ENSTTRP00000003830/1-347 SETNNIQDHN TIWEGCCRLE PTLKDAKIVS ECTGFRPVRP QVRLEREQLH bmy_08270T0/1-287 SETNNIQDHN TIWEGCCRLE PTLK------ ---------- ---------- BACU018838/1-347 SETNNIQDHN TIWEGCCRLE PTMKDAKIVS ECTGFRPVRP QVRLEREQLH 301 350 ENSP00000228476/1-347 TGPSNTEVIH NYGHGGYGLT IHWGCALEAA KLFGRILEEK KLSRMPPSHL ENSBTAP00000025068/1-350 FGSSNTEVIH NYGHGGFGLT IHWGCAQEVA KLFGKILEER NLLRIPPSHL ENSTTRP00000003830/1-347 VGSSNTEVIH NYGHGGYGLT IHWGCALEVA KIFGKILEER NLLRMPPSHL bmy_08270T0/1-287 -------VIH NYGHGGYGLT IHWGCALEVA KIFGKILEER NLLRMPPSHL BACU018838/1-347 VGSSNTEVIH NYGHGGYGLT IHWGCALEVA KIFGEILEER NLLRMPPSHL