KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:51 2014 Check: 00 .. Name: bmy_15586T0/1-650 Len: 707 Check: 9015 Weight: 1.00 Name: BACU002101/1-666 Len: 707 Check: 6157 Weight: 1.00 Name: ENSP00000221462/1-691 Len: 707 Check: 4918 Weight: 1.00 Name: ENSTTRP00000014446/1-609 Len: 707 Check: 9927 Weight: 1.00 Name: ENSBTAP00000025071/1-699 Len: 707 Check: 8086 Weight: 1.00 // 1 50 bmy_15586T0/1-650 MEVEGEGGMA QASGREWGKE GQGVESHRPG SSLPA----- ---------- BACU002101/1-666 --------MA QASGREWGKE AQGVESHRPG SSLPA----- ---------- ENSP00000221462/1-691 MEIAPQE-AP PVPGADGDIE EAPAEAGSPS PASPPADGRL KAAAKRVTFP ENSTTRP00000014446/1-609 MEVPPQE-AP PEPGADGEAE EAPAEAPSPS PASPPADGRL KAAAKRVTFP ENSBTAP00000025071/1-699 MEIPPQE-AP PGPGADGEAE EAPVEAPSPG PASPPADGRL KAAAKRVTFP 51 100 bmy_15586T0/1-650 ---------- --------AQ NVTVDEVLGA YKQACQKLNC RQIPKLLRQL BACU002101/1-666 ---------- --------AQ NVTVDEVLGA YKQACQKLNC RQIPKLLRQL ENSP00000221462/1-691 SDEDIVSGAV EPKDPWRHAQ NVTVDEVIGA YKQACQKLNC RQIPKLLRQL ENSTTRP00000014446/1-609 SDEDIVSGAV EPKDPWRHAQ NVTVDEVLGA YKQACQKLSC RQISKLFMQL ENSBTAP00000025071/1-699 SDEDIVSGAV EPKDPWRHAQ NVTVDEIIGA YKQACQKLNC RQIPKLLRQL 101 150 bmy_15586T0/1-650 QEFTDLGHRI DCLDLKGEKL DYKTCEALEE VFKRLQFKVL DLEQTSLDED BACU002101/1-666 QEFTDLGHRI DCLDLKGEKL DYKTCEALEE VFKRLQFKVL DLEQTNLDED ENSP00000221462/1-691 QEFTDLGHRL DCLDLKGEKL DYKTCEALEE VFKRLQFKVV DLEQTNLDED ENSTTRP00000014446/1-609 QEFTDLGHRI DCLDLKGEKL DYKTCEALEE VFKRLQFKVV DLEQTNLDED ENSBTAP00000025071/1-699 QEFTDLGHRI DCLDLKGEKL DYKTCEALEE VFKRLQFKVV DLEQTNLDED 151 200 bmy_15586T0/1-650 GASALFDMVE YYESATHLNI SFNKHIGTRG WQAAAHMMRK TSCLQYLDAR BACU002101/1-666 GASALFDMIE YYESATHLNI SFNKHIGTRG WQAAAHMMRK TSCLQYLDAR ENSP00000221462/1-691 GASALFDMIE YYESATHLNI SFNKHIGTRG WQAAAHMMRK TSCLQYLDAR ENSTTRP00000014446/1-609 GASALFDMIE YYESATHLNI SFNKHIGTRG WQAAAHMMRK TSCLQYLDAR ENSBTAP00000025071/1-699 GASALFDMIE YYESATHLNI SFNKHIGTRG WQAAAHMMRK TSCLQYLDAR 201 250 bmy_15586T0/1-650 NTPLLDHAAP FVARALRIRS SLAVLHLENA SLSGRPLMLL ATALKMNMTL BACU002101/1-666 NTPLLDHAAP FVARALRIRS SLAVLHLENA SLSGRPLMLL ATALKMNMTL ENSP00000221462/1-691 NTPLLDHSAP FVARALRIRS SLAVLHLENA SLSGRPLMLL ATALKMNMNL ENSTTRP00000014446/1-609 NTPLLDHAAP FVARALRIRS SLAVLHLENA SLSGRPLMLL ATALKMNMTL ENSBTAP00000025071/1-699 NTPLLDHSAP FVARALRIRS SLAVLHLESS SLSGRPLMLL ATALKMNMTL 251 300 bmy_15586T0/1-650 RELYLADNKL NGLQDSAQLG NLLKFNCSLQ ILDLR----- ---LAYICEG BACU002101/1-666 RELYLADNKL NGLQDSAQLG NLLKFNCSLQ ILDLRNNHVL DSGLAYICEG ENSP00000221462/1-691 RELYLADNKL NGLQDSAQLG NLLKFNCSLQ ILDLRNNHVL DSGLAYICEG ENSTTRP00000014446/1-609 RELYLADNKL NGLQDSAQLG NLLKFNCSLQ ILDLRNNHVL DSGLAYICEG ENSBTAP00000025071/1-699 RELYLADNKL NGLQDSAQLG NLLKFNCSLQ ILDLRNNHVL DSGLAYICEG 301 350 bmy_15586T0/1-650 LKEQRKGLAT LVLWNNQLTH TGMAFLGMTL PHTHSLETLN LGHNPIGNEG BACU002101/1-666 LKEQRKGLAT LVLWNNQLTH TGMAFLGMTL PHTHSLETLN LGHNPVGNEG ENSP00000221462/1-691 LKEQRKGLVT LVLWNNQLTH TGMAFLGMTL PHTQSLETLN LGHNPIGNEG ENSTTRP00000014446/1-609 LKEQRKGLAT LVLWNNQLTH TGMAFLGMTL ----SLETLN LGHNPIGNEG ENSBTAP00000025071/1-699 LKEQRKGLAT LVLWNNQLTH TGMAFLGMTL PHTHSLETLN LGHNPIGNEG 351 400 bmy_15586T0/1-650 VRNLKNGLIG NRSVLRLGLA STKLTCEGAV AVAEFIAESP RLLRLDLREN BACU002101/1-666 VRNLKNGLIG NRSVLRLGLA STKLTCEGAV AVAEFIAESP SFLRLDLREN ENSP00000221462/1-691 VRHLKNGLIS NRSVLRLGLA STKLTCEGAV AVAEFIAESP RLLRLDLREN ENSTTRP00000014446/1-609 VRNLKNGLIG NRSVLRLGLA STKLTCEGAV AVAEFIAESP RLLRLDLREN ENSBTAP00000025071/1-699 VRNLKNGLIS NRSVLRLGLA STKLTCEGAV AVAEFIAESP RLLRLDLREN 401 450 bmy_15586T0/1-650 EIKTGGLMAL SLALKVNHSL LRLDLDREPK KEAVKSFIET QKALLAEIQN BACU002101/1-666 EIKTGGLMAL SLALKVNHSL LRLDLDREPK KEAVKSFIET QKALLAEIQN ENSP00000221462/1-691 EIKTGGLMAL SLALKVNHSL LRLDLDREPK KEAVKSFIET QKALLAEIQN ENSTTRP00000014446/1-609 EIKTGGLMAL SLALKVNHSL LRLDLDREPK KEAVKSFIET QKALLAEIQN ENSBTAP00000025071/1-699 EIKTGGLMAL SLALKVNHSL LRLDLDREPK KEAVKSFIET QKALLAEIQN 451 500 bmy_15586T0/1-650 GCKRNFVLAR EREEKEQRLQ LSASMPEITV TEPQPDDHGP GEGPASGAQE BACU002101/1-666 GCKRNFVLAR EREEKEQRLQ LSASMPEITV TEPQPDDPGP GEGPASGAQE ENSP00000221462/1-691 GCKRNLVLAR EREEKEQPPQ LSASMPETTA TEPQPDDE-- ---PAAGVQ- ENSTTRP00000014446/1-609 GCRRNFALA- -REEQGQCLQ PSASMAEIAV SEPQPDAGAP AEEPATEAQE ENSBTAP00000025071/1-699 GCKRNFVLVR EREEKEQRLQ LSASMPEITV TEPQPDDE-P REEPAAEAQE 501 550 bmy_15586T0/1-650 NGAPGPGAGP D--SDSDSEG DEGEEEDGER AEAPCPALVP PTDSLGPGDR BACU002101/1-666 NGAPGPSAGP DSASDSDSEG DEGEEEDGER AEAPCPALVP PADPLGPGDR ENSP00000221462/1-691 NGAPSPAPSP DSDSDSDSDG EEEEEEEGER DETPCPALVP PTDSLGPGDR ENSTTRP00000014446/1-609 NGGPGPGAGP DSDSDSDSEG EDGEEEDGDR AE-------- ---------- ENSBTAP00000025071/1-699 NGAPGPSPGP DSDSDSDSEG EDRDEADGER AEAPCPTLVP PTDSLGPGDR 551 600 bmy_15586T0/1-650 SPPGCPSSPT EQRISVSSPG RGHKVFVVTR VESPPERAEP PVPPASPSPP BACU002101/1-666 SPPGCPCSPT EQRISVSSPG RGHKVFVVTR VESPPERAEP PLPPASPSPP ENSP00000221462/1-691 SPPGSPSTPT EQRISVSSPG RGHKVFVVTR VESPPERAEP PASPTPPSPP ENSTTRP00000014446/1-609 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025071/1-699 SPPGCPSSPA EQRISVSSPG WGHKVFVVTR VESPPERAEP PVPPAPPGPV 601 650 bmy_15586T0/1-650 APPCPPSPPA LSFLPTSPAR TPAEAVNTRD PGSSEPQPQP ELPQSGPPLP BACU002101/1-666 APPCPPSPPA LSFLPTSPAR TPAEAVNARD PASSEPQPQP EPPQSGPPLP ENSP00000221462/1-691 PPP---SP-- ----PASPSL PPAGAIDTRD TGSSEPQPPP EPPRSGPPLP ENSTTRP00000014446/1-609 ---------- ---------- -PSEAVSTRD PGSSEPQP-- EPPQSGPPLP ENSBTAP00000025071/1-699 SPPASASP-- ----PTSPFP TPTEAASTPD PGPPEPQPPL EPPQVGPPLP 651 700 bmy_15586T0/1-650 NGLKPEFALA LPPEPPPGPE A--------- -----KNEKE LEELLLEASQ BACU002101/1-666 NGLKPEFALA LPPEPPPGPE AKVGSCGLEH ELSCPKNEKE LEELLLEASQ ENSP00000221462/1-691 NGLKPEFALA LPPEPPPGPE VKGGSCGLEH ELSCSKNEKE LEELLLEASQ ENSTTRP00000014446/1-609 NGLKPEFALA LPPEPPPGPE AKVGSCGLEH ELSCSKNEKE LEDLLLEASQ ENSBTAP00000025071/1-699 NGLKPEFALA LSPEPPPGPE AKVGSCGLEH ELSCSKNEKE LEELLLEASQ 701 750 bmy_15586T0/1-650 ESGQETL BACU002101/1-666 ESGQETL ENSP00000221462/1-691 ESGQETL ENSTTRP00000014446/1-609 ESGQETL ENSBTAP00000025071/1-699 ESGQETL