KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:52 2014 Check: 00 .. Name: ENSP00000363667/1-913 Len: 946 Check: 2509 Weight: 1.00 Name: ENSTTRP00000000394/1-913 Len: 946 Check: 8633 Weight: 1.00 Name: BACU007350/1-815 Len: 946 Check: 2660 Weight: 1.00 Name: bmy_18583T0/1-682 Len: 946 Check: 2876 Weight: 1.00 Name: ENSBTAP00000025085/1-912 Len: 946 Check: 350 Weight: 1.00 // 1 50 ENSP00000363667/1-913 MTSRLRALGG RINNIRTSEL PKEKTRSEVI CSIHFLDGVV QTFKVTKQDT ENSTTRP00000000394/1-913 MTSRLRAFGG RINNIRTSEL PKEKTRAEVI CSVCFLDGLV QTFKVNKQDT BACU007350/1-815 MTSRLRAFGG RINNIRTSEL PKEKTRSEVI CSVCFLDGLV QTFKVNKQDT bmy_18583T0/1-682 MTSRLRAFGG RINNIRTSEL PKEKTRSEVI CSVCFLDGLV QTFKVNKQDT ENSBTAP00000025085/1-912 MTSRLRALGG RINNIRTSEL PKEKTRSEVI CSVRFLDGLV QTFKVNKQDT 51 100 ENSP00000363667/1-913 GQVLLDMVHN HLGVTEKEYF GLQHDDDSVD SPRWLEASKA IRKQLKGGFP ENSTTRP00000000394/1-913 GQVLLDMAYN YLGVTEKEYF GLQHGDDSVD PPRWLEASKP IRKQLKGGIP BACU007350/1-815 GQVLLDMAYN YLGVTEKEYF GLQHSDDSVD SP-------- ---------- bmy_18583T0/1-682 GQVLLDMAYS YLGVTEKEYF GLQHSDDSVD SPRWLEASKP IRKQLKGGIP ENSBTAP00000025085/1-912 GQVLLDMAYN YLGVTEKEYF GLQHGDDSLD SPRWLEASKP IRKQLKGGFP 101 150 ENSP00000363667/1-913 CTLHFRVRFF IPDPNTLQQE QTRHLYFLQL KMDICEGRLT CPLNSAVVLA ENSTTRP00000000394/1-913 CTLHFRVRFF IPDPNTLQQE QTRHLYFLQL KMDICEGRLT CPLNSAVVLA BACU007350/1-815 ---------- ---------- ---------- -MLVNTDRIE KVLSPHSVLI bmy_18583T0/1-682 CTLHFRVRFF IPDPNTLQQE QTRHLYFLQL KMDICEGRLT CPLNSAVVLA ENSBTAP00000025085/1-912 CTLHFRVRFF IPDPNTLQQE QTRHLYFLQL KMDICEGRLT CPLNSAVVLA 151 200 ENSP00000363667/1-913 SYAVQ-SHFG DYNSSIHHPG YLSDSHFIPD QNEDFLTKVE SLHEQHSGLK ENSTTRP00000000394/1-913 SYAVQXXXXX XXXXXXXXXX XXTDSQFIPD QNEDFLAKVE ALHEQHSGLK BACU007350/1-815 ------AHFG DRDSSIHPPG YLSDSQFIPD QNEDFLAKVE ALHEQHSGLK bmy_18583T0/1-682 SYAVQ-SHFG DRDSSIHPPG YLSDSQFIPD QNEDFLAKVE ALHEQHSGLK ENSBTAP00000025085/1-912 SYAVQ-SHFG DYDSSVHLPG YLSDSQFIPD QNEDFLAKVE SLHEQHSGLK 201 250 ENSP00000363667/1-913 QSEAESCYIN IARTLDFYGV ELHSGRDLHN LDLMIGIASA GVAVYRKYIC ENSTTRP00000000394/1-913 QSEAESCFIN IARTLDFYGV ELHSGRDLHS LDLMIGIASV GIAVYRKYIC BACU007350/1-815 QSEAESCFIN IARTLDFYGV ELHSGRDLHN LDLMIGIASV GIAVYRKYIC bmy_18583T0/1-682 QSEAESCFIN IARTLDFYGV ELHSGRDLHN LDLMIGIASV GIAVYRKYIC ENSBTAP00000025085/1-912 QSEAESCFIN IARTLDFYGV ELHSGRDLHN LDLMIGIASA GIAVYRKYIC 251 300 ENSP00000363667/1-913 TSFYPWVNIL KISFKRKKFF IHQRQKQAES REHIVAFNML NYRSCKNLWK ENSTTRP00000000394/1-913 TSFYPWVNIL KISFKRKKFF IHQRQKQTES REHIVAFNML NYRSCKNLWK BACU007350/1-815 TSFYPWVNIL KISFKRKKFF IHQRRKQTES REHIVAFNML NYRSCKNLWK bmy_18583T0/1-682 TSFYPWVNIL KISFKRKKFF IHQRRKQTES REHIVAFNML NYRSCKNLWK ENSBTAP00000025085/1-912 TSFYPWVNIL KISFKRKKFF IHQRQKQTES REHIVAFNML NYRSCKNLWK 301 350 ENSP00000363667/1-913 SCVEHHTFFQ AKKLLPQEKN VLSQYWTMGS RNTKKSVNNQ YCKKVIGGMV ENSTTRP00000000394/1-913 SCVEHHTFFQ AKKLLPQEKN VLSQYWTLGS RNPKKSVNNQ YCKKVIGGMV BACU007350/1-815 SCVEHHTFFQ AKKLLPQEKN VLSQYWTLGS RNPKKSVNNQ YCKKVIGGMV bmy_18583T0/1-682 SCVEHHTFFQ AKKLLPQEKN VLSQYWTLGS RNPKKSVNNQ YCKKVIGGMV ENSBTAP00000025085/1-912 SCVEHHTFFQ AKKLLPQEKN VLSQYWSLGS RNPKKSVNNQ YCKKVIGGMV 351 400 ENSP00000363667/1-913 WNPAMRRSLS VEHLETKSLP SRSPPITPNW RSPRLRHEIR KPRHSSADNL ENSTTRP00000000394/1-913 WNPAMQRSLS VEHLETKSLP SRSPPITPNW RSPRLRHEIR KPRHSSADNL BACU007350/1-815 WNPAMQRSLS VEQLETKSLP SRSPPITPNW RSPRLRHEIR KPRHSSADNL bmy_18583T0/1-682 WNPAMQRSLS VEQLETKSLP SRSPPITPNW RSPRLRHEIR KPRHSSADNL ENSBTAP00000025085/1-912 WNPAMQRSLS VEHLETKSLP SRSPPITPNW RSPRLRHEIR KPRHSSADNL 401 450 ENSP00000363667/1-913 ANEMTYITET EDVFYTYKGS LAPQDSDSEV SQNRSPHQE- ---------- ENSTTRP00000000394/1-913 VNEMTYITET EDVFYTYKGS MSPKDSDSEI SQNRSPHRE- ---------- BACU007350/1-815 VNEMTYITET EDVFYTYKGS LSPKDSDSEI SQHRSPHRE- ---------- bmy_18583T0/1-682 VNEMTYITET EDVFYTYKGS LSPKDSDSEI SQNRSPHREE MNSVLAFVSD ENSBTAP00000025085/1-912 ANEMTYITET EDVFYTYKGS LSPKDSDSEV SQNRSPHRE- ---------- 451 500 ENSP00000363667/1-913 ---------- ---------- -SLSENNPAQ SYLTQKSSSS VSPSSNAPGS ENSTTRP00000000394/1-913 ---------- ---------- -SISENNPAQ SCLTQKSSSS VSPSSNAPGS BACU007350/1-815 ---------- ---------- -SISENNPAQ SYLTQKSSSS VSPSSNAPGS bmy_18583T0/1-682 DYRIYSSEAS ASEGEHPFVC RSISENNPAQ SCLTQKSSSS VSPSSNAPGS ENSBTAP00000025085/1-912 ---------- ---------- -SISENSPAQ SCLTQKSSSS VSPSSNAPGS 501 550 ENSP00000363667/1-913 CSPDGVDQQL LDDFHRVTKG GSTEDASQYY CDKNDNGDSY LVLIRITPDE ENSTTRP00000000394/1-913 CSPDGVDQQF LEDFHRVTKG GSTEDSSQYY CDKND-GDGY LVLIRITPDE BACU007350/1-815 CSPDGIDQQF LEDFHRVTKG SSSEDSSQYY CDKND-GDGY LVLIRITPDE bmy_18583T0/1-682 CSPDGVDQQF LEDFHRVTKG SSSEDSSQYY CDKND-GDGY LVLIRITPDE ENSBTAP00000025085/1-912 CSPDGVDQQF LEDFHRVTKG GSAEDSSQYY CDKND-GDGY LVLIRITPDE 551 600 ENSP00000363667/1-913 DGKFGFNLKG GVDQKMPLVV SRINPESPAD TCIPKLNEGD QIVLINGRDI ENSTTRP00000000394/1-913 DGKFGFNLKG GVDQKMPLVV SRINPESPAD TCIPKLNEGD QIVLINGRDI BACU007350/1-815 DGKFGFNLK- ---------- --------AD TCIPKLNEGD QIVLINGRDI bmy_18583T0/1-682 DGKFGFNLKG GVDQKMPLVV SRINPESPAD TCIPKLNEGD QIVLINGRDI ENSBTAP00000025085/1-912 DGKFGFNLKG GVDQKMPLVV SRINPESPAD TCIPKLNEGD QIVLINGRDI 601 650 ENSP00000363667/1-913 SEHTHDQVVM FIKASRESHS RELALVIRRR AVRSFADFKS EDELNQLFPE ENSTTRP00000000394/1-913 SEHTHDQVVM FIKASRESHT RELALVIRRK AVHSFADIKS EDELNQLFPE BACU007350/1-815 SEHTHDQVVM FIKASRESHT RELALVIRRK AVHSFADIKS EDELNQLFPE bmy_18583T0/1-682 SEHTHDQVVM FIKASRESHT RELALVIRRK AVHSFADIKS EDELNQLFPE ENSBTAP00000025085/1-912 SEHTHDQVVM FIKASRESHT RELALVIRRK AVHSFADIKS EDELNQLFPE 651 700 ENSP00000363667/1-913 AIFPMCPEGG DTLEGSMAQL KKGLESGTVL IQFEQLYRKK PGLAITFAKL ENSTTRP00000000394/1-913 AIFPVCPEGG GTLEGSMEQL KKGLESGTVL IQFEQLYRKK PGLAITFAKL BACU007350/1-815 AIFPVCPEGG DTLEGSMEQL KKGLESGTVL IQFEQLYRKK PGLAITFAKL bmy_18583T0/1-682 AIFPVCPEGG DTLEGSMEQL KKGLESGTVL IQFE------ ---------- ENSBTAP00000025085/1-912 AIFPVCPETG DTLEGSMEQL KKGLESGTVL IQFEQLYRKK PGLAITFAKL 701 750 ENSP00000363667/1-913 PQNLDKNRYK DVLPYDTTRV LLQGNEDYIN ASYVNMEIPA ANLVNKYIAT ENSTTRP00000000394/1-913 PQNLDKNRYK DVLPYDTTRV LLQRNEDYIN ASYVNMEIPA ANLVNKYIAA BACU007350/1-815 PQNLDKNRYK DVLPYDTTRV LLQRNEDYIN ASYVN----- ---------- bmy_18583T0/1-682 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025085/1-912 PQNLDKNRYK DVLPYDTTRV LLQGNEDYIN ASYVNMEIPA AHLMNKYIAA 751 800 ENSP00000363667/1-913 QGPLPHTCAQ FWQVVWDQKL SLIVMLTTLT ERGRTKCHQY WPDPPDVMNH ENSTTRP00000000394/1-913 QGPLPHTCAQ FWQVVWDQKL SLIVMLTTLT ERGRTKCHQY WPYPPEVMEH BACU007350/1-815 ---------Q FWQVVWDQKL SLIVMLTTLT ERGRTKCHQY WPYPPEVMEH bmy_18583T0/1-682 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025085/1-912 QGPLPHTCAQ FWQVVWDQKL SLIVMLTTLT ERGRTKCHQY WPDPPDVMEH 801 850 ENSP00000363667/1-913 GGFHIQCQSE DCTIAYVSRE MLVTNTQTGE EHTVTHLQYV AWPDHGVPDD ENSTTRP00000000394/1-913 GSFHIRCQSE DCTIAYVFRE MLVTNTETGE EHTVTHLQYV AWPDHGVPDD BACU007350/1-815 GSFHIRCQSE DCTIAYVFRE MLVTNTETGE EHPVTHLQYV AWPDHGVPDD bmy_18583T0/1-682 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025085/1-912 GSFHIRCQSE DCTIAYVFRE MLVTNTETGE EHTVTHLQYV AWPDHGVPDD 851 900 ENSP00000363667/1-913 SSDFLEFVNY VRSLRVDSEP VLVHCSAGIG RTGVLVTMET AMCLTERNLP ENSTTRP00000000394/1-913 SSDFLEFVNY VRSLRVEGEP VLVHCSAGIG RTGVLVTMET SMCLIERNLP BACU007350/1-815 SSDFLEFVNY VRSLRVEGEP VLVHCSAGIG RTGVLVTMET SMCLIERNLP bmy_18583T0/1-682 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025085/1-912 SSDFLEFVNY VRSLRVDGEP VLVHCSAGIG RTGVLVTMET AMCMIERNLP 901 950 ENSP00000363667/1-913 IYPLDIVRKM RDQRAMMVQT SSQYKFVCEA ILRVYEEGLV QMLDPS ENSTTRP00000000394/1-913 VYPLDIVRKM RDQRAMMVQT SSQYKFVCEA ILRVYEEGLV QMLDPS BACU007350/1-815 VYPLDIVRKM RDQRAMMVQT SSQYKFVCEA ILRVYEEGLV QMLDPS bmy_18583T0/1-682 ---------- ---------- ---------- ---------- ------ ENSBTAP00000025085/1-912 VYPLDIVRKM RDQRAMMVQT SSQYKFVCEA ILRVYEEGLV QMLDPS