KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:24:53 2014 Check: 00 .. Name: ENSP00000335024/1-422 Len: 832 Check: 3439 Weight: 1.00 Name: ENSBTAP00000025090/1-422 Len: 832 Check: 6118 Weight: 1.00 Name: ENSTTRP00000006752/1-422 Len: 832 Check: 4833 Weight: 1.00 Name: bmy_17965T0/1-807 Len: 832 Check: 54 Weight: 1.00 Name: BACU007734/1-422 Len: 832 Check: 2536 Weight: 1.00 // 1 50 ENSP00000335024/1-422 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025090/1-422 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006752/1-422 ---------- ---------- ---------- ---------- ---------- bmy_17965T0/1-807 MSHRKIHLAL SLVLILCGLF NSIFCEKQQD SQQNINLVLL KKIPSLSQKT BACU007734/1-422 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000335024/1-422 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025090/1-422 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006752/1-422 ---------- ---------- ---------- ---------- ---------- bmy_17965T0/1-807 EAGYKAFAQE LFRSLIIEDP RKNIIFSPVA ISIALATLSL GIKSTMRTNL BACU007734/1-422 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000335024/1-422 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025090/1-422 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006752/1-422 ---------- ---------- ---------- ---------- ---------- bmy_17965T0/1-807 IEDLGLDLRK IQVLDKDQHL VQTWHELVKQ EQLKHKDILF IDNNRKINQM BACU007734/1-422 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000335024/1-422 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025090/1-422 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006752/1-422 ---------- ---------- ---------- ---------- ---------- bmy_17965T0/1-807 FLQEIDRVHE VDIQTIDFKD TEKTKKAINQ YVAEKVHKKI KDLITRLDPQ BACU007734/1-422 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000335024/1-422 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025090/1-422 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006752/1-422 ---------- ---------- ---------- ---------- ---------- bmy_17965T0/1-807 TVLCLVNYVF FKGIWERAFQ TNLTQKEDFL VNENTKVQVD MMRKTERMIY BACU007734/1-422 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000335024/1-422 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025090/1-422 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006752/1-422 ---------- ---------- ---------- ---------- ---------- bmy_17965T0/1-807 SHSEELLATM VKMPYKGNVS IILVLPDVGQ FHFALREITA KRARLQKASD BACU007734/1-422 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000335024/1-422 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025090/1-422 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006752/1-422 ---------- ---------- ---------- ---------- ---------- bmy_17965T0/1-807 FRLVHLVLPK FKISSKINLK HLLPKIDIKD MPTTTAATQS ITKKASLSIL BACU007734/1-422 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000335024/1-422 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025090/1-422 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006752/1-422 ---------- ---------- ---------- ---------- ---------- bmy_17965T0/1-807 EAVHQAEIEV SEHGLITDAA KDTDVWKVPV DTKEVPVVVK FNRPFLLFVE BACU007734/1-422 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000335024/1-422 ---------- MGPAWLWLLG TGILASVHCQ PLLAHGDKSL QGPQPPRHQL ENSBTAP00000025090/1-422 ---------- MGPAWLWLLG AGILASVHCQ PLPAHGDKSL RVPEAPRGQL ENSTTRP00000006752/1-422 ---------- MGPAWQWLLG AGILASVYWQ PFPARGDKSL GVPEAPRGQL bmy_17965T0/1-807 DQMTQRDLFR MGPAWQWLLG AGILASVYCQ PFPARGDKSL GVPEAPRGQL BACU007734/1-422 ---------- MGPAWQWLLG AGILASVYCQ PFPARGDKSL GVPEAPRGQL 451 500 ENSP00000335024/1-422 SEPAPAYHRI TPTITNFALR LYKELAADAP GNIFFSPVSI STTLALLSLG ENSBTAP00000025090/1-422 SESLPAYQKI TPTLTSFALR LYKQLAAETP GNIFFSPVSL SSTLALLSLG ENSTTRP00000006752/1-422 SEALPAYRKI TPTITNFALR LYKQLAAETS GNIFFSPVSI SSTLALLSLG bmy_17965T0/1-807 SEALPAYRKI TPTITNFALR LYKQLAAETP GNIFFSPVSI SSTLALLSLG BACU007734/1-422 SEALPAYRKI TPTITNFALR LYKQLAAETP GNIFFSPVSI SSTLALLSLG 501 550 ENSP00000335024/1-422 AQANTSALIL EGLGFNLTET PEADIHQGFR SLLHTLALPS PKLELKVGNS ENSBTAP00000025090/1-422 VQANTRTQIL EGLGFNLTET PEADIHRGFQ SLIHTLDLPS PKLELKLGNS ENSTTRP00000006752/1-422 VQADTPAQIL EGLGFNLTET PEADIHRGFQ SLIHTLDLPS PKLELKVGNS bmy_17965T0/1-807 AQADTPAQIL EGLGFNLTET PEADIHRGFQ SLIHTLDLPS PKLELKVGNS BACU007734/1-422 AQADTPAQIL EGLGFNLTET PEADIHRGFQ SLIHTLDLPS PKLELKVGNS 551 600 ENSP00000335024/1-422 LFLDKRLKPR QHYLDSIKEL YGAFAFSANF TDSVTTGRQI NDYLRRQTYG ENSBTAP00000025090/1-422 LFLDTQLKPQ QHILDNIREL YGVFAFSANF TNSDATRKQI NGYVSRQTYG ENSTTRP00000006752/1-422 LFLDKQLKPQ QHFLGNIREL YRAFAFSVNF TDSNTTRRQI NDFVKKQTYG bmy_17965T0/1-807 LFLDKQLKPQ QHFLDNIREL YRAFAFSVNF TDSNTTRRQI NDYVRKQTYG BACU007734/1-422 LFLDKQLKPQ QHFLDNIREL YRAFAFSVNF TDSNTTRRQI NDYVRKQTYG 601 650 ENSP00000335024/1-422 QVVDCLPEFS QDTFMVLANY IFFKAKWKHP FSRYQTQKQE SFFVDERTSL ENSBTAP00000025090/1-422 QVVDCLEEFT PDTLMVLLNY MFFKAKWKHP FNRYQTQKQE SFFVDGRTSL ENSTTRP00000006752/1-422 QVVDFLEELT QDTLMVLLNY MFFKAKWKHP LNRYQTPKQE SFFVDERTSL bmy_17965T0/1-807 Q--------- ---------- ------WKHP FNCYQTQKQE SFFVDERTSL BACU007734/1-422 QVVDCLEEFT QDTLMVLLNY MFFKAKWKHP FNCYQTQKQE SFFVDERTSL 651 700 ENSP00000335024/1-422 QVPMMHQKEM HRFLYDQDLA CTVLQIEYRG NALALLVLPD PGKMKQVEAA ENSBTAP00000025090/1-422 RIPMMHQKEM HRFLYDQEVA CTVLQLEYSG NAQALLILPD PGKMAQVEAA ENSTTRP00000006752/1-422 RIPMMHQKEM HRFLYDQEVA CTVLQMEYSG NALALLILPD PGKMAQVEAA bmy_17965T0/1-807 RIPMMHQKEM HRFLYDQEVA CTVLQMEYSG NALALLILPD PGKMAQVEDA BACU007734/1-422 RIPMMHQKEM HRFLYDQEVA CTVLQMEYNG NALALLILPD PGKMAQVEEA 701 750 ENSP00000335024/1-422 LQPQTLRKWG QLLLPSLLDL HLPRFSISGT YNLEDILPQI GLTNILNLEA ENSBTAP00000025090/1-422 LQPETLKKWD KLLLPSLLDL HLPKFSISGT YNLEEILPHI GLTGLFNSEA ENSTTRP00000006752/1-422 LQPETLRKWD QLLLPSLLDL HLPRFSISGT YNLEEILPHI GLTSLFNLEA bmy_17965T0/1-807 LQPETLRKWD QLLLPSLLDL HLPRFSISGT YNLEEILPHI GLTGLFNLEA BACU007734/1-422 LQPETLRRWD QLLLPSLLDL HLPRFSISGT YNLEEILSHI GLTGLFNLEA 751 800 ENSP00000335024/1-422 DFSGVTGQLN KTISKVSHKA MVDMSEKGTE AGAASGLLSQ PPSLNTMSDP ENSBTAP00000025090/1-422 DYSGITGQLN RTISRVSHKA TVDVSERGTE AAVASSLLSQ PRSLNATSAP ENSTTRP00000006752/1-422 DFSGITGQLN RTISRVSHKA AVDVSERGTE AGVASGLLSQ PQSLNATSAP bmy_17965T0/1-807 DFSGITGQLN RTISRVSHKA AVDVSERGTE AGVASGLLSQ PQSLNATSAP BACU007734/1-422 DFSGITGQLN RTISRVSHKA AVDVSERGTE AGVASGLLSQ PQSLNATSAP 801 850 ENSP00000335024/1-422 HAHFNRPFLL LLWEVTTQSL LFLGKVVNPV AG ENSBTAP00000025090/1-422 HAGFNRPFLL LLWEVTTESP LFLGKVVNPA AG ENSTTRP00000006752/1-422 HAHFNRPFLV LFWEVTTQSL LFLGKVVNPA AG bmy_17965T0/1-807 HAHFNRPFLV LLWEVTTQSL LFLGKVVNPA VG BACU007734/1-422 HAHFNRPFLV LLWEVTTQSL LFLGKVVNPA VG