KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:25:00 2014 Check: 00 .. Name: bmy_11280T0/1-438 Len: 473 Check: 2704 Weight: 1.00 Name: ENSP00000463159/1-422 Len: 473 Check: 2877 Weight: 1.00 Name: BACU001450/1-394 Len: 473 Check: 9473 Weight: 1.00 Name: ENSBTAP00000025109/1-370 Len: 473 Check: 5470 Weight: 1.00 // 1 50 bmy_11280T0/1-438 GDVDICCPWA LSEAGVIVVV TALPQADFLP AAPGYSWAVS PQPRNSPLAG ENSP00000463159/1-422 -----MVMAA LSLVAACWGR AAADESVQLP AAPGSSVRAR ETMVSVTMAT BACU001450/1-394 ---------- ---------- ---------- ---------- --------AT ENSBTAP00000025109/1-370 ---------- ---------- ---------- ---------- --MVSVTMAT 51 100 bmy_11280T0/1-438 RQAAREGRTL SRRRLMGALP LFSLAGSREQ SEGVGDNGLC NYGIQKSMLL ENSP00000463159/1-422 SE-------- -------WIQ FFKEAGIPPG PAVNYAVMFV DNRIQKSMLL BACU001450/1-394 SQ-------- -------WIQ FFKEAGIPPG PAVNYAVMFV DNRIQKSMLL ENSBTAP00000025109/1-370 SE-------- -------WIQ FFKEAGIPPG PAVNYAVMFV DNRIQKSMLL 101 150 bmy_11280T0/1-438 DLNKEIMNEL GVTVVGDIIA ILKHAK---- -DMCKAATES VPCSPSPLPG ENSP00000463159/1-422 DLNKEIMNEL GVTVVGDIIA ILKHAKVVHR QDMCKAATES VPCSPSPLAG BACU001450/1-394 DLNKEIMNEL GVTVVGDIIA ILKHAKVVHR QDMCKAATES VPCSPSPLPG ENSBTAP00000025109/1-370 DLNKEIMNEL GVTVVGDIIA ILKHAKVVHR QDMCKAATES VPCSPSPLPS 151 200 bmy_11280T0/1-438 EIRRGASSAA SRMITNSLNR DSPPGTPPRR PDTSTSKISV TVSNKMAAKS ENSP00000463159/1-422 EIRRG-TSAA SRMITNSLNH DSPPSTPPRR PDTSTSKISV TVSNKMAAKS BACU001450/1-394 EIRRGASSAA SRMITNSLNR DSPPGTPPRR PDTSTSKISV TVSNKMAAKS ENSBTAP00000025109/1-370 EIRRGASSAA SRMITNSLNR DSPPGTPPRR PDTSTSKISV TVSNKMAAKS 201 250 bmy_11280T0/1-438 AKAAAALARR EEESLTGPTK RRRVTAEMEG KYIINMPKGT TPRTRKILEQ ENSP00000463159/1-422 AKATAALARR EEESLAVPAK RRRVTAEMEG KYVINMPKGT TPRTRKILEQ BACU001450/1-394 AKAAAALARR EEESLTGATK RRRVTAEMEG KYIINMPKGT TARTRKILEQ ENSBTAP00000025109/1-370 AKA-AALAHR EEESLSVPTK RRRVTAEMEG KYIINMPKGT TPRTRKILEQ 251 300 bmy_11280T0/1-438 QQAAK----- ---------- ---------- ----GLHRTS VFDRLGAETK ENSP00000463159/1-422 QQAAK----- ---------- ---------- ----GLHRTS VFDRLGAETK BACU001450/1-394 QQAAKVSVAG LLGASAGASS PRDHGTGSVL ACLSSLHRTS VFDRLGAETK ENSBTAP00000025109/1-370 QQAAK----- ---------- ---------- ----GLHRTS VFDRLGAETK 301 350 bmy_11280T0/1-438 ADTTTGNKPT GVFSRLGATP EMDEDLAWDS DHD-SSSSVL QYAGVLKKLG ENSP00000463159/1-422 ADTTTGSKPT GVFSRLGATP ETDEDLAWDS DND-SSSSVL QYAGVLKKLG BACU001450/1-394 ADTTTGNKPT GVFSRLGATP EMDEDLAWDS DHD-SSSSVL QYAGVLKKLG ENSBTAP00000025109/1-370 ADTTTGNKPT GVFSRLGATP ETDEDLAWDS DNDSSSSSVL QYAGVLKKLG 351 400 bmy_11280T0/1-438 RAPAKASPQP APTVKAKATS SAATAAAPTL RRLAFSSRPG LERKPESLSK ENSP00000463159/1-422 RGPAKASPQP ALTVKAKATS SATTAAAPTL RRLALSSRSG LERKPESLSK BACU001450/1-394 RAPAKASPQP APTVKAKATS SAATATAPTL RRLAFSSRPG LERKPESLSK ENSBTAP00000025109/1-370 RAPAKASPQP ALTVKAKATS SAPTAAAPTL RRLALSSRPA PERKPEALSK 401 450 bmy_11280T0/1-438 VSIIQRLGKA ALVPEAQDSQ VTSTKSKSSA EVKVTIKRTL VGPRGSSSSE ENSP00000463159/1-422 VSIIKRLGAA ALVPEAQDSQ VTSTKSKSSA EVKVTIKRTL VGPRGSSSSE BACU001450/1-394 VSIIQRLGKA ALVPEAQDSQ VTSTKSP--- ----TVRCVL PDPPAPPASQ ENSBTAP00000025109/1-370 VSIIQRLGKP ALVPEAQDSQ VTSTKSP--- ----TVRCVL PDPPAPPASQ 451 500 bmy_11280T0/1-438 GLGAQMDHAG TVSVFKRLGR RTF ENSP00000463159/1-422 GLGAQMDHAG TVSVFKRLGR RTF BACU001450/1-394 -------RPP RRRRWRRACR DC- ENSBTAP00000025109/1-370 -------RRP RRR-WRRASR DC-