KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:25:01 2014 Check: 00 .. Name: ENSP00000313816/1-560 Len: 560 Check: 9475 Weight: 1.00 Name: ENSBTAP00000025112/1-555 Len: 560 Check: 4890 Weight: 1.00 Name: bmy_00317T0/1-524 Len: 560 Check: 5474 Weight: 1.00 Name: ENSTTRP00000006158/1-490 Len: 560 Check: 4687 Weight: 1.00 // 1 50 ENSP00000313816/1-560 MNRKWEAKLK QIEERASHYE RKPLSSVYRP RLSKPEEPPS IWRLFHRQAQ ENSBTAP00000025112/1-555 MKRKWEATLK QIEERASHYE RKPLSSVYRP RLSKPEEPPS IWKLFHRQTQ bmy_00317T0/1-524 MKRKWEAKLK QIEERASRYE REPLSLVYRP RLSKPEEPPS IWKLFHRQTQ ENSTTRP00000006158/1-490 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000313816/1-560 AFNFVKSCKE DVHVFALECK VGDGQRIYLV TTYAEFWFYY KSRKNLLHCY ENSBTAP00000025112/1-555 AFNFVKSCKQ EVHVFALECK VGDGQRIYLV TTYTQLWFYY KSRRNLLHCY bmy_00317T0/1-524 AFNFVKSCKE DVHVFALECK VGDGQRIYLV TTYAQLWFYY KSRRALLHCY ENSTTRP00000006158/1-490 ---------- DVHVFALEYK VGDGQHIYLV TTYTQLWFYY KSRRNLLHCY 101 150 ENSP00000313816/1-560 EVIPENAVCK LYFDLEFNKP ANPGADGKKM VALLIEYVCK ALQELYGVNC ENSBTAP00000025112/1-555 EVIPENAVCK LYFDLEFNKL ANPGADGKKM VALLIEHVCK ALQEFYTVNC bmy_00317T0/1-524 EVIPENAVCK LYFDLEFNRL ANPGADGKKM VALLIEHVCK ALQQFYRVSC ENSTTRP00000006158/1-490 EVIPENAVCK LYFDLEFNRL ANPGADGKKM VALLIEHVCR ALQQFYRVSC 151 200 ENSP00000313816/1-560 SAEDVLNLDS STDEKFSQHL IFQLHDVAFK DNIHVGNFLR KILQPALDLL ENSBTAP00000025112/1-555 SAEDVLNLDS STEEKFSRHL IFQLHDVAFK DNIHVGNFVR KILQPAFHLI bmy_00317T0/1-524 SAEDVLNLDS STSEKFSRHL IFQLHDVAFK DNIHVGNFVR KILEPAFHLI ENSTTRP00000006158/1-490 SAEDVLNLDS STNEKFSRHL IFQLHDVAFK DNIHVGNFVR KMLEPAFHLI 201 250 ENSP00000313816/1-560 GSEDDDSAPE TTGHGFPHFS EAPARQGFSF NKMFTEKATE ESWTSNSKKL ENSBTAP00000025112/1-555 ASEDEDMTPE TTGHEFTHFS ETPSEQGTCF SKMSTDIDVG ESQTSNSEKL bmy_00317T0/1-524 ASEDDDMTPK TMGHEFSHFS ETPIKQGISF SKKSTDEDIG ESWTTNSKKL ENSTTRP00000006158/1-490 ASEDDDMTPE TMGHEFSHFS ETPVKQGISF SKKSTDKDMG ESWTTNSKKL 251 300 ENSP00000313816/1-560 ERLGSAEQSS PDLSFLVVKN NMGEKHLFVD LGVYTRNRNF RLYKSSKIGK ENSBTAP00000025112/1-555 GRLGSAQQSS PDLSFLIVKN DMGEKRLFVD LGVYTRNRNF RLYKSSKIGK bmy_00317T0/1-524 ERLGSAKQSG PDLSFLIVKN NIGEKHLFVD LGVYTRNRNF RLYKSSKIGK ENSTTRP00000006158/1-490 ERLGSAKQSS PDLSFLIVKN NVGEKHLFVD LGVYTRNRNF RLYKSSEIGK 301 350 ENSP00000313816/1-560 RVALEVTEDN KFFPIQSKDV SDEYQYFLSS LVSNVRFSDT LRILTCEPSQ ENSBTAP00000025112/1-555 YVALEVAEDN KFFPIQSKNI SKENQYFLSS LVSNVRFSDA LRILTCDVPQ bmy_00317T0/1-524 CVPLEVAEDN RFYPIQSKNI SKENQYFLSA LVSNVRFSDT LRILTCDISQ ENSTTRP00000006158/1-490 YVPLEVAEDN KFYPVQSENI SKENQYFLSA LVSNVRFSDT LRILTCDMSQ 351 400 ENSP00000313816/1-560 NKQKGVGYFN SIGTSVETIE GFQCSPYPEV DHFVLSLVNK DGIKGGIRRW ENSBTAP00000025112/1-555 SKQ-RVQCFS RTGTSVEAIE GFQCSPYPEI DQFVLSLVNK NGIKGGIRRW bmy_00317T0/1-524 NKQKRVEYFN HTSTSVETIE GFQCSPYPEI DQFVLLLVNK NGIKGGIRRW ENSTTRP00000006158/1-490 NK--RVKNFN HT----ETIE GFQCSPYPEI DQFVLLLVNK NGIKGGIQRW 401 450 ENSP00000313816/1-560 NYFFPEELLV YDICKYRWCE NIGRAHKSNN IMILVDLKNE VWYQKCHDPV ENSBTAP00000025112/1-555 NYFFPEELLV YDICKYRWCE NIGRAHRSNN IMILVDLKNE VWYQKCHDPV bmy_00317T0/1-524 NYFFPEELLV YDICKYRWCE NIGRAHKS-- ---------- ---------- ENSTTRP00000006158/1-490 NYFFPEELLV YDICKYRWCE NIGRAHKSNN IMILVDLKNE VWYQKCHDPV 451 500 ENSP00000313816/1-560 CKAENFKSDC FPLPAEVCLL FLFKEEEEFT TDEADETRSN ETQNPHKPSP ENSBTAP00000025112/1-555 CKAENFKSDC FPLPAEVCLL SLLKEGEEFT T---DTTADT ETKSPHGPSS bmy_00317T0/1-524 ---------- FPLPAEVCLL FLLKEEEEFT A---DKTRNN ETKNPHEPSS ENSTTRP00000006158/1-490 CKAENFKSDC FPLPAEVRLL FLLKEEEEFT T---NETRDS ETKNPHEPSS 501 550 ENSP00000313816/1-560 SRLSTGASAD AVWDNGIDDA YFLEATEDAE LAEAAENSLL SYNSEVDEIP ENSBTAP00000025112/1-555 SVLSKGAFSD ADWDNGIDDT YILEATEDAE LAEAAENSLL AYNR-MDEIP bmy_00317T0/1-524 SASSKGTFSD ADWDNGIDDA YILEATEDAE LAEAAENSLL GYNG-IDEIP ENSTTRP00000006158/1-490 IASSKGTFSD ADWDNGIDDA YILEATEDAE LAEAAENSLL GYNG-IDEIP 551 600 ENSP00000313816/1-560 DELIIEVLQE ENSBTAP00000025112/1-555 DELLIEVLQE bmy_00317T0/1-524 DELIIEVLQE ENSTTRP00000006158/1-490 DELIIEVLQE