KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:25:02 2014 Check: 00 .. Name: bmy_12034T0/1-205 Len: 319 Check: 9516 Weight: 1.00 Name: ENSTTRP00000014797/1-319 Len: 319 Check: 8334 Weight: 1.00 Name: ENSP00000350874/1-318 Len: 319 Check: 8188 Weight: 1.00 Name: ENSBTAP00000025118/1-318 Len: 319 Check: 8079 Weight: 1.00 // 1 50 bmy_12034T0/1-205 ---------- ---------M LYDL------ ---------- ---------- ENSTTRP00000014797/1-319 MRLLAGWLCL SLASVWLAQR MWTLRSPLTR SLYVNMTSGP GGPAAAAAGG ENSP00000350874/1-318 MRLLAGWLCL SLASVWLARR MWTLRSPLTR SLYVNMTSGP GGP-AAAAGG ENSBTAP00000025118/1-318 MRLLAGWLCL SLASVWLARR MWTLRSPLTR SLYVNMTSGP GGP-AAAAGG 51 100 bmy_12034T0/1-205 ------WYAC NREKLCESLQ AVFVQSYLDQ GTQIFLNNSI EKSGWLFIQL ENSTTRP00000014797/1-319 RKENHQWYAC NREKLCESLQ AVFVQSYLDQ GTQIFLNNSI EKSGWLFIQL ENSP00000350874/1-318 RKENHQWYVC NREKLCESLQ AVFVQSYLDQ GTQIFLNNSI EKSGWLFIQL ENSBTAP00000025118/1-318 RKENHQWYVC NREKLCESLQ AVFVQSYLDQ GTQIFLNNSI EKSGWLFIQL 101 150 bmy_12034T0/1-205 YHSFVSSVFS LFMSRTSING LLGRGSMFVF SPDQFQRLLK INPDWKTHRL ENSTTRP00000014797/1-319 YHSFVSSVFS LFMSRTSING LLGRGSMFVF SPDQFQRLLK INPDWKTHRL ENSP00000350874/1-318 YHSFVSSVFS LFMSRTSING LLGRGSMFVF SPDQFQRLLK INPDWKTHRL ENSBTAP00000025118/1-318 YHSFVSSVFS LFMSRTSING LLGRGSMFVF SPDQFQRLLK INPDWKTHRL 151 200 bmy_12034T0/1-205 LDLGAGDGEV TKIMSPHFEE IYATELSETM IWQLQKKKYR VLGINEWQNT ENSTTRP00000014797/1-319 LDLGAGDGEV TKIMSPHFEE IYATELSETM IWQLQKKKYR VLGINEWQNT ENSP00000350874/1-318 LDLGAGDGEV TKIMSPHFEE IYATELSETM IWQLQKKKYR VLGINEWQNT ENSBTAP00000025118/1-318 LDLGAGDGEV TKIMSPHFEE IYATELSETM IWQLQKKKYR VLGINEWQKT 201 250 bmy_12034T0/1-205 GFQYDVISCL NLLDRCDQPL TLLKDIRSVL EPTRGRVILA LVLPFHPYVE ENSTTRP00000014797/1-319 GFQYDVISCL NLLDRCDQPL TLLKDIRSVL EPTRGRVILA LVLPFHPYVE ENSP00000350874/1-318 GFQYDVISCL NLLDRCDQPL TLLKDIRSVL EPTRGRVILA LVLPFHPYVE ENSBTAP00000025118/1-318 GFQYDVISCL NLLDRCDQPL TLLKDIRSVL EPTRGRVILA LVLPFHPYVE 251 300 bmy_12034T0/1-205 N--------- ---------- ---------- ---------- ---------- ENSTTRP00000014797/1-319 NVGGKWDKPS EILEIKGQNW EEQVNSLPEV FRKAGFVIEA FTRLPYLCEG ENSP00000350874/1-318 NVGGKWEKPS EILEIKGQNW EEQVNSLPEV FRKAGFVIEA FTRLPYLCEG ENSBTAP00000025118/1-318 NVGGKWDKPS EILEIKGQNW EEQVNSLPEV FRKAGFVIEA FTRLPYLCEG 301 350 bmy_12034T0/1-205 ---------- ----DLSPF ENSTTRP00000014797/1-319 DMYNDYYVLD DAVFVLKPV ENSP00000350874/1-318 DMYNDYYVLD DAVFVLKPV ENSBTAP00000025118/1-318 DMYNDYYVLD DAVFVLKPV