KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:25:05 2014 Check: 00 .. Name: ENSP00000359740/1-1061 Len: 1087 Check: 7564 Weight: 1.00 Name: ENSBTAP00000025130/1-1052 Len: 1087 Check: 7581 Weight: 1.00 Name: ENSTTRP00000009442/1-1024 Len: 1087 Check: 1786 Weight: 1.00 Name: bmy_05053T0/1-1050 Len: 1087 Check: 8356 Weight: 1.00 Name: BACU012253/1-1062 Len: 1087 Check: 966 Weight: 1.00 // 1 50 ENSP00000359740/1-1061 MGDPGSEIIE SVPPAGPEAS ESTTDENEDD IQFVSEGPLR PVLEYIDLVS ENSBTAP00000025130/1-1052 MGDPGSEIIE CIPPAGPEAS ESTVEENEDD IQFVSEGPLR PVLEYIDLVS ENSTTRP00000009442/1-1024 ---------- ---------- ---------- -----EGPLR PVLEYIDLVS bmy_05053T0/1-1050 -----MLTVL LAPPIHTGST GARA------ VVWNVIGEDL PGL------- BACU012253/1-1062 MGDPGSEIIE CVPPAGPEAS ESTPEENEDD IQFVSEGPLR PVLEYIDLVS 51 100 ENSP00000359740/1-1061 SDDEEPSTSY TDENIKRKDH IDYQKDKVAL TLARLARHVE VEKQQKEEKN ENSBTAP00000025130/1-1052 SDDDEPSTSQ RED--KHKDH IDHQKDKVAL TLARLARHVE VEKQQKEEKN ENSTTRP00000009442/1-1024 SDDEEPSTSQ SEDNVKHKDH IDHQKDKVAL TLARLARHVE VEKQQKEEKN bmy_05053T0/1-1050 VEKQEPDI-- -QGNVKRKDH IDHQKDKVAL TLARLARHVE VEKQQKEEKN BACU012253/1-1062 SDDEEPSTSQ SGGNVKRKDH IDHQKDKVAL TLARLARHVE VEKQQKEEKN 101 150 ENSP00000359740/1-1061 RAFREKIDFQ HAHGLQELEF IRGHSDTEAA RLCVDQWLKM PGLKTGTINC ENSBTAP00000025130/1-1052 RAFREKIDFQ HAHGLQELEF IRGHSDTEAA RLCVDQWLKM PGLKTGTINS ENSTTRP00000009442/1-1024 RAFREKVDFQ HAHGLQELEF IRGHSDTEAA RLCVDQWLKM PGLKTGTINS bmy_05053T0/1-1050 RAFREKIDFQ QAHGLQELEF IRGHSDTEAA RLCVDQWLKM PGLKTGTINS BACU012253/1-1062 RAFREKIDFQ QAHGLQELEF IRGHSDTEAA RLCVDQWLKM PGLKTGTINS 151 200 ENSP00000359740/1-1061 GTKSSFRRGG HTWVSGKPIL CPIMHCNKEF DNGHLLLGHL KRFDHSPCDP ENSBTAP00000025130/1-1052 GTKGSFRRGS QIRASGKPIS CPIMHCNKEF DNGHLLLGHL KRFDHSPCDP ENSTTRP00000009442/1-1024 GTKGSFRRGG QIRVSGKPIS CPIMHCNKQF DNGHLLLGHL KRFDHSPCDP bmy_05053T0/1-1050 GTKSSFRRGG QIRVSGKPIS CPIMHCNKQF DNGHLLLGHL KRFDHSPCDP BACU012253/1-1062 GTKSSFRRGG QIQVSGKPIS CPIMHCNKQF DNGHLLLGHL KRFDHSPCDP 201 250 ENSP00000359740/1-1061 TITLHGPFFS SFACVVCYKK FVTQQQYRDH LFDKEATDDG HNNNLLPQII ENSBTAP00000025130/1-1052 TITLHGPFIS SFACVVCYKN FVTQQQYRDH LFAKEAADDG HKNNLLPQII ENSTTRP00000009442/1-1024 TITLHGPFIS SFACVVCYKN FVTQQQYRDH LFAKEAADDG HKNNLLPQII bmy_05053T0/1-1050 TITLHGPFIN SFACVVCYKN FVTQQQYRDH LFAKEAADDG HKNNLLPQII BACU012253/1-1062 TITLHGPFIS SFACVVCYKN FVTQQQYRDH LFAKETADDG HKNNLLPQII 251 300 ENSP00000359740/1-1061 QCFACPNCFL LFSRKEECSK HMSGKNHFHQ SFKLG----- ---------- ENSBTAP00000025130/1-1052 QCFACPNCFL LFSSKDECLK HMSGKNHFHQ SFKLG----- ---------- ENSTTRP00000009442/1-1024 QCFACPNCFL LFSSKDECLK HMSGKNHFHQ SFKLG----- ---------- bmy_05053T0/1-1050 QCFACPDCFL LFSSKDECLK HMSGKNHFHQ SFKLGERQRG GRPGHSTQIF BACU012253/1-1062 QCFACPNCFL LFSSKDECLK HMSGKNHFHQ SFKLG----- ---------- 301 350 ENSP00000359740/1-1061 ---------D NKGIAHPISF PSFAKKLLIS LCKDVPFQVK CVACHKTLRS ENSBTAP00000025130/1-1052 ---------D DKAVAQPISF PSFAKKLLIS LCKDVPFQVK CVACHQTLRS ENSTTRP00000009442/1-1024 ---------D DKGMAQPISF PSFAKKLLIS LCKDVPFQVK CVACHQTLRS bmy_05053T0/1-1050 ASHSSFCLSD DKGMAQPISF PSFAKKLLIS LCKDVPFQVK CVACHQTLRS BACU012253/1-1062 ---------D DKGMAQPISF PSFAKKLFIS LCKDVPFQVK CVACHQTLRS 351 400 ENSP00000359740/1-1061 HMELTAHFRV HCRNAGPVAV AEKSITQVAE KFILRGYCPD CNQVFVDETS ENSBTAP00000025130/1-1052 HMELTAHFRV RCRNAGPVAL AEKSIAQVAE KFLLRGYCPH CNHVFVDETS ENSTTRP00000009442/1-1024 HMELTAHFRV RCRNAGPVAL AEKSIAQVAE KFLLRGYCPH CNRVFVDETS bmy_05053T0/1-1050 HMELTAHFRV RCRNAGPVAL AEKSIAQVAE KFLLRGYCPH CNHVFVDETS BACU012253/1-1062 HMELTAHFRV RCRNAGPVAL AEKSIAQVAE KFLLRGYCPH CNHVFVDETS 401 450 ENSP00000359740/1-1061 TQNHKQNSGH KVRVINSVEE SVLLYCHSSE GNKDPSSDLH LLLDQSKFSS ENSBTAP00000025130/1-1052 TWNHKQNLGH KVRVINSMEE SVLLYCHSNE GNK-PLSDLH LLQDGSKFSS ENSTTRP00000009442/1-1024 TRNHKRNSGH KVRVINSMEE SVLLYCHSSE GNK-PPSDLH LLQDKSKFSS bmy_05053T0/1-1050 TRNHKHNSGH KVRVINSMEE SVLLYCHSSE GNK-PHSDLH LLQDQSKFSS BACU012253/1-1062 TRNHKQNSGH KVRVINSMEE SVLLYCHSSE GNK-PPSDLH LLQDQSKFSS 451 500 ENSP00000359740/1-1061 LKRTMSIKES SSLECIAIPK KKMNLKDKSH EGVACVQKEK SVVKTWFCEC ENSBTAP00000025130/1-1052 LKRNMSSQES SSQDCSTVPK KKMNLGVKSL GGVVCFQKER SLVKTWFCEC ENSTTRP00000009442/1-1024 LKRNMSVRES SSEDCSTVPK KKINLGDKSH GGMVCVQKEK SLVKTWFCEC bmy_05053T0/1-1050 LKRNMSVRES SSQDCSTVPK KKINLGDKSH GGMVCVQKEK SLVKTWFCEC BACU012253/1-1062 LKRNMSVRES SSQDCSTVPK KKINLGDKSH GGMVCVQKEK SLVKTWFCEC 501 550 ENSP00000359740/1-1061 NQRFPSEDAV EKHVFSANTM GYKCVVCGKV CDDSGVIRLH MSRIHGGAHL ENSBTAP00000025130/1-1052 HQRFPSEDAV EKHVFSANTM CYKCVVCGKV CEDLGVIRLH MSRIHGGAHL ENSTTRP00000009442/1-1024 QQRFPSEDAV EKHVFSANTM CYKCVVCGKV CEDSGVIRLH MSRIHGGAHL bmy_05053T0/1-1050 QQRFPSEDAV EKHVFSANTM CYKCVVCGKV CEDSGVIRLH MSRIHGGAHL BACU012253/1-1062 QQRFPSEEAV EKHVFSANTM CYKCVVCGKV CEDSGVIRLH MSRIHGGAHL 551 600 ENSP00000359740/1-1061 NNFLFWCRTC KKELTRKDTI MAHVTEFHNG HRYFYEMDEV EGETLPSSST ENSBTAP00000025130/1-1052 NNFLFWCRTC KKELRRKEAI MAHVTEFHSG HRYFYETDEV AGDTSPSSST ENSTTRP00000009442/1-1024 NNFLFWCRTC KKELARKEAI MAHVTEFHNG HRYFYETDEV EGDTLPSSST bmy_05053T0/1-1050 NNFLFWCRTC KKELARKEAI MAHVTEFHNG HRYFYETDEV EGDTLPSSST BACU012253/1-1062 NNFLFWCRTC KKELARKEAI MAHVTEFHNG HRYFYETDEV EGDTLPSSST 601 650 ENSP00000359740/1-1061 TL-DNLTANK PSSAITVIDH SPANSSPRGK WQCRICEDMF DSQEYVKQHC ENSBTAP00000025130/1-1052 VLVSDLTAEN PSSALTIVDH SPANRPPRGK WQCRICEDMF DSQECVKQHC ENSTTRP00000009442/1-1024 TLVNDLTADN PFSTITILDH SPATSPPSGK WQCRICEDMF DSQECVKQHC bmy_05053T0/1-1050 TLVNDLTADN PSSTITILDH SPATSPPSGK WQCRICEDMF DSQECVKQHC BACU012253/1-1062 TLVNDLTADN PSSTITILDH SPATSPPSGK WQCRICEDTF DSQESVKQHC 651 700 ENSP00000359740/1-1061 MSLASHKFHR YSCAHCRKPF HKIETLYRHC QDEHDNEIKI KYFCGLCDLI ENSBTAP00000025130/1-1052 MSLTSHQFHR YSCTHCKKTF HKMETLQRHC QDEHNSEVKM KYFCGLCDLS ENSTTRP00000009442/1-1024 MSLASHQFHR YSCAHCKKTF HKMETLYRHC QDEHDNEIKM KYFCGLCDLI bmy_05053T0/1-1050 MSLASHQFHR YSCAHCKKTF HKMETLYRHC QDEHDNEIKM KYFCGLCDLI BACU012253/1-1062 MSLASHQFHR YSCAHCKKTF HKMETLYRHC QDKHDNEIKM KYFCGLCDLI 701 750 ENSP00000359740/1-1061 FNVEEAFLSH YEEHHSIDYV FVSEKTETSI KTEDDFPVIE TSNQLTCGCR ENSBTAP00000025130/1-1052 FNVEDAFLTH YKEHHSTDYV FVSEKTEPSI KTESDFPVIE TGNLLTCGCR ENSTTRP00000009442/1-1024 FNVEEAFLSH YKEHHSIDYV FVSEKTETSI KTESDFPVIE TGNLLTCGCR bmy_05053T0/1-1050 FNVEEAFLSH YKEHHSIDYV FVSEKTETSI KTESDFPVIE TGNLMTCGCR BACU012253/1-1062 FNVEEAFLSH YKEHHSIDYV FVSEKTETSI KTESDFPVIE TGNLMTCGCR 751 800 ENSP00000359740/1-1061 ESYICKVNRK EDYSRCLQIM LDKGKLWFRC SLCSATAQNL TDMNTHIHQV ENSBTAP00000025130/1-1052 ESYLCKVNRR EDHGRCLQTL LGQGRLWFRC GVCSATTQSL GDLHTHVRQA ENSTTRP00000009442/1-1024 ESYLC-VNRM EDHARCLQTL LGQGRLXXXX XXXXXXXXXX XXXXXXXXXX bmy_05053T0/1-1050 ESYLCKVNRR EDHARCLQTL LGQGRLWFRC GACSATAQAT DDMLAHVRQA BACU012253/1-1062 ESYLCKVNRR EDHARCLQTL LGQGRLWFRC GACSATAQAT DDMRAHVRQA 801 850 ENSP00000359740/1-1061 HKEKSDEEE- QQYVIKCGTC TKAFHDPESA QQHFHRKHCF LQKPSVAHFG ENSBTAP00000025130/1-1052 HADLETP--- PRGLIKCGTC TKAFQDPESA QQHFHTKHCS LRGPVGARLS ENSTTRP00000009442/1-1024 XXXXGAEGT- PRCLIKCGTC TRAFQDPESA QQHFHRKHCF LREPSVACFG bmy_05053T0/1-1050 HAEQEGAGGA PRCLIKCGTC TKAFQDPESA QQHFHGKHCF LREPSMARFG BACU012253/1-1062 HAEQEVAGGA PWCLIKCGTC TKAFQDPESA QQHFHGKHCF LREPSVARFG 851 900 ENSP00000359740/1-1061 SEKSNLYKFT ASASHTERKL KQAINYSKSL DMEKGVENDL SYQNIEEEIV ENSBTAP00000025130/1-1052 AEPKSP---- -PPARAERKP RQTADGLQTA EPDRAAEMEL SGQSADEEVV ENSTTRP00000009442/1-1024 PEQTSPYTFA ASSSRAERKL RQAASCPQTS DLERGAETDV SCQSADEEVV bmy_05053T0/1-1050 PEQTSPYTFA ASSSRAERKL RQAASCPQTS DPERGAETDV SCQSADEEVV BACU012253/1-1062 PEQTSPYTFA ASSSRAERKP RQAASCPQTS DPERGAETDV SCQSADEEVV 901 950 ENSP00000359740/1-1061 ELPDLDYLRT MTHIVFVDFD NWSNFFGHLP GHLNQGTFIW GFQGGNTNWK ENSBTAP00000025130/1-1052 ELPDLDYLRT MTHIVFVDFD NWSNFFGHLP GHLNQGTFIW GFQGGNTNWK ENSTTRP00000009442/1-1024 ELPDLDYLRT MTHIVFVDFD NWSNFFGHLP GNLNQGTFIW GFQGGNTNWK bmy_05053T0/1-1050 ELPDLDYLRT MTHIVFVDFD NWSNFFGHLP GNLNQGTFIW GFQGGNTNWK BACU012253/1-1062 ELPDLDYLRT MTHIVFVDFD NWSNFFGHLP GNLNQGTFIW GFQGGNTNWK 951 1000 ENSP00000359740/1-1061 PPLNCKIYNY LNRIGCFFLH PRCSKRKDAA DFAICMHAGR LDEQLPKQIP ENSBTAP00000025130/1-1052 PPAHCKVYNY LNRIGCFFLH PRCSKRKDAA DFAICMHAGR LDEQLPKQIP ENSTTRP00000009442/1-1024 PPVNCKIYNY -NKIGCFFLH PRCSKKKXXX XXXXXXXAGR LDEQLPKQIP bmy_05053T0/1-1050 PPVNCKIYNY LNRIGCFFLH PRCSKRKDAA DFAICMHAGR LDEQLPKQIP BACU012253/1-1062 PPVNCKIYNY LNRIGCFFLH PRCSKRKDAA DFAICMHAGR LDEQLPKQIP 1001 1050 ENSP00000359740/1-1061 FTILSGDQGF LELENQFKKT QRPAHILNPH HLEGDMMCAL LNSISDTTKE ENSBTAP00000025130/1-1052 FTILSGDQGF LELENQFKKT QRPAHILNPH HLEGDMMCAL LNSISDTTKE ENSTTRP00000009442/1-1024 FTILSGDQGF LELENQFKKT QRPAHILNPH HLEGDMMCAL LNSISDTTKE bmy_05053T0/1-1050 FTILSGDQGF LELENQFKKT QRPAHILNPH HLEGDMMCAL LNSISDTTKE BACU012253/1-1062 FTILSGDQGF LELENQFKKT QRPAHILNPH HLEGDMMCAL LNSISDTTKE 1051 1100 ENSP00000359740/1-1061 CDSDDNMGAK NTSIGEEFIS TEDVELEEAI RRSLEEM ENSBTAP00000025130/1-1052 CDSDDNLGIK SASVGEEFRS AEDVELEEAI RRSLEEM ENSTTRP00000009442/1-1024 CDSDDNLGMK STSMGEEFRS TEDVELEEAI RRSLEEM bmy_05053T0/1-1050 CDSDDNLGMK STSVGEEFRS TE-------- ------- BACU012253/1-1062 CDSDDNLSMK STSMGEEFRS TEDVELEEAI RRSLEEM