KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:25:07 2014 Check: 00 .. Name: ENSTTRP00000005355/1-186 Len: 331 Check: 5951 Weight: 1.00 Name: BACU006670/1-331 Len: 331 Check: 6211 Weight: 1.00 Name: ENSP00000259632/1-186 Len: 331 Check: 7164 Weight: 1.00 Name: bmy_05694T0/1-196 Len: 331 Check: 2423 Weight: 1.00 Name: ENSBTAP00000025136/1-186 Len: 331 Check: 8521 Weight: 1.00 // 1 50 ENSTTRP00000005355/1-186 MAAVTDVQRL QARVEELERW VYGPGGSRGS RKVADGLVKV QVALGNIASK BACU006670/1-331 MAAVTDVQRL QARVEELERW VYGPGGSRGS RKVADGLVKV QVALGNIASK ENSP00000259632/1-186 MAGLTDLQRL QARVEELERW VYGPGGARGS RKVADGLVKV QVALGNISSK bmy_05694T0/1-196 MAAVTDVQRL QARVEELERC VYGPGGSRGS RKVADGLVKV QVALGNIASK ENSBTAP00000025136/1-186 MAAVTDVQRL QARVEELERW VYGPGGSRGS RKVADGLVKV QVALGNIASK 51 100 ENSTTRP00000005355/1-186 RERVKILYKK XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX EQFILSQVAL BACU006670/1-331 RERVKILYKK IEDLIKYLDP EYIDRIALPD ASKLQFILAE EQFILSQVAL ENSP00000259632/1-186 RERVKILYKK IEDLIKYLDP EYIDRIAIPD ASKLQFILAE EQFILSQVAL bmy_05694T0/1-196 RERVKILYKK IEDLIKYLDP EYIDRIAIPD ASKLQFILAE EQFILSQVAL ENSBTAP00000025136/1-186 RERVKVLYKK IEDLIKYLDP EYIDRIALPD ASKLQFILAE EQFILSQVAL 101 150 ENSTTRP00000005355/1-186 LEQVEALVPM LDSTHIKAVP EHAAHLQRLA QIHIQQQDQC VEITEESKTL BACU006670/1-331 LEQVEALVPM LDSTHIKAVP EHAARLQRLA QIHIQQQDQC VEITEESKAL ENSP00000259632/1-186 LEQVNALVPM LDSAHIKAVP EHAARLQRLA QIHIQQQDQC VEITEESKAL bmy_05694T0/1-196 LEQVEALVPM LDSTHIKAVP EHAARLQRLA QIHIQQQDQC VEITEESKAL ENSBTAP00000025136/1-186 LEQVEALVPM LDSTHIKAVP EHAARLQRLA QIHIQQQDQC VEITEESKAL 151 200 ENSTTRP00000005355/1-186 LEEYNKT--- -------TM- ---------- ---------- ---------- BACU006670/1-331 LEEYNKTWVA GLRHDSSRME HYRKAGSVEL PAPSPMPQLP PDTLEMRVRD ENSP00000259632/1-186 LEEYNKT--- -------TM- ---------- ---------- ---------- bmy_05694T0/1-196 LEEYNKTMPV LTLTCDQTM- ---------- ---------- ---------- ENSBTAP00000025136/1-186 LEEYNKT--- -------TM- ---------- ---------- ---------- 201 250 ENSTTRP00000005355/1-186 ---------- ---------- ---------- ---------- ---------- BACU006670/1-331 GSKIRNLLGL ALGRLEGGSA RHVVFSGSGR AAGKAVSCAE IVKRRVPGLH ENSP00000259632/1-186 ---------- ---------- ---------- ---------- ---------- bmy_05694T0/1-196 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025136/1-186 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000005355/1-186 -LLSKQFVQ- ---W-----D ELLCQLEAAK QV-------- -KPAEE---- BACU006670/1-331 QLTKLRFLQT EDSWVPASPD AGLDPLTVRR HVPAVWVLLS RDPLDPNECG ENSP00000259632/1-186 -LLSKQFVQ- ---W-----D ELLCQLEAAT QV-------- -KPAEE---- bmy_05694T0/1-196 -LLSKQFVQ- ---W-----D ELLCQLEAAK QV-------- -KPAEE---- ENSBTAP00000025136/1-186 -LLSKQFVQ- ---W-----D ELLCQLEAAK QV-------- -KPVEE---- 301 350 ENSTTRP00000005355/1-186 ---------- ---------- ---------- - BACU006670/1-331 YQPPGAPPGL GPTPTSSSGP RPRRRARDTR F ENSP00000259632/1-186 ---------- ---------- ---------- - bmy_05694T0/1-196 ---------- ---------- ---------- - ENSBTAP00000025136/1-186 ---------- ---------- ---------- -