KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:25:20 2014 Check: 00 .. Name: ENSP00000378830/1-776 Len: 781 Check: 9436 Weight: 1.00 Name: ENSBTAP00000025183/1-779 Len: 781 Check: 4316 Weight: 1.00 Name: bmy_05994T0/1-680 Len: 781 Check: 2069 Weight: 1.00 Name: BACU002408/1-779 Len: 781 Check: 4635 Weight: 1.00 Name: ENSTTRP00000016442/1-780 Len: 781 Check: 8699 Weight: 1.00 // 1 50 ENSP00000378830/1-776 MNNSLENTIS FEEYIRVKAR SVPQHRMKEF LDSLASKGPE ALQEFQQTAT ENSBTAP00000025183/1-779 MNNSLENTIS FEEYIRVKAR SVPQHRMKEF LDSLASKGPE ALQEFQQTAT bmy_05994T0/1-680 ---------- ---------- ---------- ---------- ---------- BACU002408/1-779 MNNSLENTIS FEEYIRVKAR SVPQHRMKEF LDSLASKGPE ALQEFQQTAT ENSTTRP00000016442/1-780 MNNSLENTIS FEEYIRVKAR SVPQHRMKEF LDSLASKGPE ALQEFQQTAT 51 100 ENSP00000378830/1-776 TTMVYQQGGN CIYTDSTEVA GSLLELACPV TTSVQPQTQQ EQQIQVQQPQ ENSBTAP00000025183/1-779 TTMVYQQGGN CIYTDSTEVA GSLLELACPV TTSVQPQTQP EQQIQVQQPQ bmy_05994T0/1-680 ---------- ---------- ---------- ---------- ---------- BACU002408/1-779 TTMVYQQGGN CIYTDSTEVA GSLLELACPV TTSVQPQTQQ EQQIQVQQPQ ENSTTRP00000016442/1-780 TTMVYQQGGN CIYTDSTEVA GSLLELACPV TTSVQPQTQQ EQQIQVQQPQ 101 150 ENSP00000378830/1-776 QVQVQVQVQQ SPQQVSA-QL SPQLTVHQPT EQPIQVQVQI QGQAPQSAAP ENSBTAP00000025183/1-779 QVQVQVQVQQ SPQQVSAQQL SPQLTVHQPA EQPIHVQVQI QGQAAQPAAP bmy_05994T0/1-680 -LQVQVQVQQ SPQQVSAQQL SPQLTVHQPA EQPIHVQVQI QGQAAQPTAP BACU002408/1-779 QVQVQVQVQQ SPQQVSAQQL SPQLTVHQPA EQPIHVQVQI QGQAAQPTAP ENSTTRP00000016442/1-780 QVQVQVQVQQ SPQQVSAQQL SPQLTVHQPA EQPIHVQVQI QGQAAQPTAP 151 200 ENSP00000378830/1-776 SIQTPSLQSP SPSQLQAAQI QVQHVQAAQQ IQAAEIPEEH IPHQQIQAQL ENSBTAP00000025183/1-779 SIQTPSLQSP SPSQLQAAQI QVQHMQAAQQ IQAPEIPEEH IPHQQIQAQL bmy_05994T0/1-680 SIQTPSLQSP SPSQLQAAQI QVQHMQAAQQ IQAAEIPEEH IPHQQIQAQL BACU002408/1-779 SIQTPSLQSP SPSQLQAAQI QVQHMQAAQQ IQAAEIPEEH IPHQQIQAQL ENSTTRP00000016442/1-780 SIQTPSLQSP SPSQLQAAQI QVQHMQAAQQ IQAAEIPEEH IPHQQIQAQL 201 250 ENSP00000378830/1-776 VAGQSLAGGQ QIQIQTVGAL SPPPSQQGSP REGERRVGTA SVLQPVKKRK ENSBTAP00000025183/1-779 VAGQSLAGGQ QIQIQTVGAL SPPPSQQGSP REGERRVGTA SVLQPVKKRK bmy_05994T0/1-680 VAGQSLAGGQ QIQIQTVGAL SPPPSQQGSP REGERRVGTA SVLQPVKKRK BACU002408/1-779 VAGQSLAGGQ QIQIQTVGAL SPPPSQQGSP REGERRVGTA SVLQPVKKRK ENSTTRP00000016442/1-780 VAGQSLAGGQ QIQIQTVGAL SPPPSQQGSP REGERRVGTA SVLQPVKKRK 251 300 ENSP00000378830/1-776 VDMPITVSYA ISGQPVATVL AIPQGQQQSY VSLRPDLLTV DSAHLYSATG ENSBTAP00000025183/1-779 VDMPITVSYA ISGQPVATVL AIPQGQQQSY VSLRPDLLTV DSAHLYSATG bmy_05994T0/1-680 VDMPITVSYA ISGQPVATVL AIPQGQQQSY VSLRPDLLTV DSAHLYSATG BACU002408/1-779 VDMPITVSYA ISGQPVATVL AIPQGQQQSY VSLRPDLLTV DSAHLYSATG ENSTTRP00000016442/1-780 VDMPITVSYA ISGQPVATVL AIPQGQQQSY VSLRPDLLTV DSAHLYSATG 301 350 ENSP00000378830/1-776 TITSPTGETW TIPVYSAQPR GDPQQQSITH IAIPQEAYNA VHVSGSPTAL ENSBTAP00000025183/1-779 TITSPTGETW TIPVYSAQPR GDPQQQSITH IAIPQEAYNA VHVSGSPTAL bmy_05994T0/1-680 TITSPTGETW TIPVYSAQPR GDPQQQSITH IAIPQEAYNA VHVSGSPTAL BACU002408/1-779 TITSPTGETW TIPVYSAQPR GDPQQQSITH IAIPQEAYNA VHVSGSPTAL ENSTTRP00000016442/1-780 TITSPTGETW TIPVYSAQPR GDPQQQSITH IAIPQEAYNA VHVSGSPTAL 351 400 ENSP00000378830/1-776 AAVKLEDDKE KMVGTTSVVK NSHEEVVQTL ANSLFPAQFM NGNIHIPVAV ENSBTAP00000025183/1-779 AAVKLEDDKE KMVGTTSVVK NSHEEVVQTL ANSLFPAQFM NGNIHIPVAV bmy_05994T0/1-680 AAVKLEDDKE KMVGTTSVVK NSHEEVVQTL ANSLFPAQFM NGNIHIPVAV BACU002408/1-779 AAVKLEDDKE KMVGTTSVVK NSHEEVVQTL ANSLFPAQFM NGNIHIPVAV ENSTTRP00000016442/1-780 AAVKLEDDKE KMVGTTSVVK NSHEEVVQTL ANSLFPAQFM NGNIHIPVAV 401 450 ENSP00000378830/1-776 QAVAGTYQNT AQTVHIWDPQ QQPQQQTPQE QTPPP----Q QQQQQLQVTC ENSBTAP00000025183/1-779 QAVAGTYQNT AQTVHIWDPQ QQPQQQTPQE QTPPPP--QQ QQQQQLQVTC bmy_05994T0/1-680 QAVAGTYQNT AQTVHIWDPQ QQPQQQTPQE QTPPPPQQQQ QQQQQLQVTC BACU002408/1-779 QAVAGTYQNT AQTVHIWDPQ QQPQQQTPQE QTPPPP--QQ QQQQQLQVTC ENSTTRP00000016442/1-780 QAVAGTYQNT AQTVHIWDPQ QQPQQQTPQE QTPPPP-QQQ QQQQQLQVTC 451 500 ENSP00000378830/1-776 SAQTVQVAEV EPQSQPQPSP ELLLPNSLKP EEGLEVWKNW AQTKNAELEK ENSBTAP00000025183/1-779 SAQTVQVAEV EPQSQPQPSP ELLLPNSLKP EEGLEVWKNW AQTKNAELEK bmy_05994T0/1-680 SAQTVQVAEV EPQSQPQPSP ELLLPNSLKP EEGLEVWKNW AQTKNAELEK BACU002408/1-779 SAQTVQVAEV EPQSQPQPSP ELLLPNSLKP EEGLEVWKNW AQTKNAELEK ENSTTRP00000016442/1-780 SAQTVQVAEV EPQSQPQPSP ELLLPNSLKP EEGLEVWKNW AQTKNAELEK 501 550 ENSP00000378830/1-776 DAQNRLAPIG RRQLLRFQED LISSAVAELN YGLCLMTREA RNGEGEPYDP ENSBTAP00000025183/1-779 DAQNRLAPIG RRQLLRFQED LISSAVAELN YGLCLMTREA RNGEGEPYDP bmy_05994T0/1-680 DAQNRLAPIG RRQLLRFQED LISSAVAELN YGLCLMTREA RNGEGEPYDP BACU002408/1-779 DAQNRLAPIG RRQLLRFQED LISSAVAELN YGLCLMTREA RNGEGEPYDP ENSTTRP00000016442/1-780 DAQNRLAPIG RRQLLRFQED LISSAVAELN YGLCLMTREA RNGEGEPYDP 551 600 ENSP00000378830/1-776 DVLYYIFLCI QKYLFENGRV DDIFSDLYYV RFTEWLHEVL KDVQPRVTPL ENSBTAP00000025183/1-779 DVLYYIFLCI QKYLFENGRV DDIFSDLYYV RFTEWLHEVL KDVQPRVTPL bmy_05994T0/1-680 DVLYYIFLCI QKYLFENGRV DDIFSDLYYV RFTEWLHEVL KDVQPRVTPL BACU002408/1-779 DVLYYIFLCI QKYLFENGRV DDIFSDLYYV RFTEWLHEVL KDVQPRVTPL ENSTTRP00000016442/1-780 DVLYYIFLCI QKYLFENGRV DDIFSDLYYV RFTEWLHEVL KDVQPRVTPL 601 650 ENSP00000378830/1-776 GYVLPSHVTE EMLWECKQLG AHSPSTLLTT LMFFNTKYFL LKTVDQHMKL ENSBTAP00000025183/1-779 GYVLPSHVTE EMLWECKQLG AHSPSTLLTT LMFFNTKYFL LKTVDQHMKL bmy_05994T0/1-680 GYVLPSHVTE EMLWECKQLG AHSPSTLLTT LMFFNTKYFL LKTVDQHMKL BACU002408/1-779 GYVLPSHVTE EMLWECKQLG AHSPSTLLTT LMFFNTKYFL LKTVDQHMKL ENSTTRP00000016442/1-780 GYVLPSHVTE EMLWECKQLG AHSPSTLLTT LMFFNTKYFL LKTVDQHMKL 651 700 ENSP00000378830/1-776 AFSKVLRQTK KNPSNPKDKS TSIRYLKALG IHQTGQKVTD DMYAEQTENP ENSBTAP00000025183/1-779 AFSKVLRQTK KNPSNPKDKS TSIRYLKALG IHQTGQKVTD DMYAEQTENP bmy_05994T0/1-680 AFSKVLRQTK KNPSNPKDKS TSIRYLKALG IHQTGQKVTD DMYAEQTENP BACU002408/1-779 AFSKVLRQTK KNPSNPKDKS TSIRYLKALG IHQTGQKVTD DMYAEQTENP ENSTTRP00000016442/1-780 AFSKVLRQTK KNPSNPKDKS TSIRYLKALG IHQTGQKVTD DMYAEQTENP 701 750 ENSP00000378830/1-776 ENPLRCPIKL YDFYLFKCPQ SVKGRNDTFY LTPEPVVAPN SPIWYSVQPI ENSBTAP00000025183/1-779 ENPLRCPIKL YDFYLFKCPQ SVKGRNDTFY LTPEPVVAPN SPIWYSVQPI bmy_05994T0/1-680 ENPLRCPIKL YDFYLFKCPQ SVKGRNDTFY LTPEPVVAPN SPIWYSVQPI BACU002408/1-779 ENPLRCPIKL YDFYLFKCPQ SVKGRNDTFY LTPEPVVAPN SPIWYSVQPI ENSTTRP00000016442/1-780 ENPLRCPIKL YDFYLFKCPQ SVKGRNDTFY LTPEPVVAPN SPIWYSVQPI 751 800 ENSP00000378830/1-776 SREQMGQMLT RILVIREIQE AIAVANASTM H ENSBTAP00000025183/1-779 SREQMGQMLT RILVIREIQE AIAVASASTM H bmy_05994T0/1-680 SREQMGQMLT RILVIREIQE AIAVANASTM H BACU002408/1-779 SREQMGQMLT RILVIREIQE AIAVANASTM H ENSTTRP00000016442/1-780 SREQMGQMLT RILVIREIQE AIAVANASTM H