KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:25:23 2014 Check: 00 .. Name: ENSBTAP00000025201/1-732 Len: 1857 Check: 3340 Weight: 1.00 Name: ENSTTRP00000000334/1-733 Len: 1857 Check: 5248 Weight: 1.00 Name: bmy_18693T0/1-608 Len: 1857 Check: 3140 Weight: 1.00 Name: BACU004345/1-1807 Len: 1857 Check: 9999 Weight: 1.00 // 1 50 ENSBTAP00000025201/1-732 ---------- ---------- ---------- -MTEGTCLRR RGGPYKTEPA ENSTTRP00000000334/1-733 ---------- ---------- ---------- -SPGDTCLRR RGGPYKTEPA bmy_18693T0/1-608 MVGLSKRRPS RAGGWSGCGA QAEGNRERAA VMTEGTCLRR RGGPYKTEPA BACU004345/1-1807 ---------- ---------- ---------- -MIASRCLRR RGGPYKTEPA 51 100 ENSBTAP00000025201/1-732 TDLSRWRLSN QVGRQTWTYS Q-EEDPVREQ SGLEAHLLGL DTKSFFKDLP ENSTTRP00000000334/1-733 TDLSRWRLSN ERGRQTWTYF QGEEDPGRGQ SGLEAHLLGL DTRSYFKDLP bmy_18693T0/1-608 TDLSRWRLSN ERGRQTWTYF QGEEDPGRGQ SGLEAHLLGL DTRSHFKDLP BACU004345/1-1807 TDLSRWRLSN ERGRQTWTYF QGEEDPGRGQ SGLEAHLLGL DTRSHFKDLP 101 150 ENSBTAP00000025201/1-732 KAHTACRGAL NGVTFYAALQ TEDGHWAGDY GGPLFLLPGL LITCHVANIP ENSTTRP00000000334/1-733 KAHTAREGAL NGMTFYAALQ AEDGHWAGDY GGPLFLLPGL LITCYVAHIP bmy_18693T0/1-608 KAVTAREGAL NGMTFYAALQ AEDGHWAGDY GGPLFLLPGL LITCYVAHIP BACU004345/1-1807 KAVTAREGAL NGMTFYAALQ AEDGHWAGDY GGPLCLLPGL LITCYVAHIP 151 200 ENSBTAP00000025201/1-732 LPAGYREEII RYLRSVQLPD GGWGLHIEDK STVFGTALNY VSLRILGVGP ENSTTRP00000000334/1-733 LPAGYREEIT RYLRSVQLPD GGWGLHIEDK STVFGTALNY VSLRILGVGP bmy_18693T0/1-608 LPAGYREEIT RYLRSVQLPD GGWGLHIEDK STVFGTALNY VSLRILGVGP BACU004345/1-1807 LPAGYREEIT RYLRSVQLPD GGWGLHIEDK STVFGTALNY VSLRILGVGP 201 250 ENSBTAP00000025201/1-732 DDPDLVRARN LLHKKGGAVF IPSWGKFWLA VLNVYSWEGL NTLFPEMWLF ENSTTRP00000000334/1-733 DDPDLVRARN ILHKKGGAVF IPSWGKFWLA VLNVYSWEGL NTLFPEMWLF bmy_18693T0/1-608 DDPDLVRARN ILHKKGGAVF IPSWGKFWLA VLNVYSWEGL NTLFPEMWLF BACU004345/1-1807 DDPDLVRARN ILHKKGGAVF IPSWGKFWLA VLNVYSWEGL NTLFPEMWLF 251 300 ENSBTAP00000025201/1-732 PDWMPAHPST IWCHCRQVYL PMAYCYSTRL SAEEGPLVQS LRQELYLEDY ENSTTRP00000000334/1-733 PEWMPAHPST IWCHCRQVYL PMAYCYGTQL SAEEDPLVQS LRQELYVEDY bmy_18693T0/1-608 PDWMPAHPST IWCHCRQVYL PMAYCYGTRL SAEEDPLVQS LRQELYVEDY BACU004345/1-1807 PDWMPAHPST IWCHCRQVYL PMAYCYGTRL SAEEDPLVQS LRQELYVEDY 301 350 ENSBTAP00000025201/1-732 SCIDWAAHRN SVAPDDLYTP HSWLLHVVYA ILNLYERHHS TSLRQWATQK ENSTTRP00000000334/1-733 GRIDWPAHRD SVAPDELYTP HSWLLHVVYA ILNLYERHHS AGLRQRAIQK bmy_18693T0/1-608 GRVDWPAHRD SVAPGELYTP HSWLLHVVHA ILNLYERHHS ASLRQRAIQK BACU004345/1-1807 GRIDWPAHRD RVAPDELYTP HSWLLRVVHV ILNLYERHHS ASLRQRAIQK 351 400 ENSBTAP00000025201/1-732 LYEHIAADDR FTKCISIGPI SKTINMLVRW HVDGPASAVF QEHVSRIPDY ENSTTRP00000000334/1-733 LYEHIAADDR FTKYLSIGPI SKTVNMLACW HREGPASSAF QEHLSRIPDY bmy_18693T0/1-608 LYEHIAADDR FTKYLSIGPI SKTINMLACW HREGPASSAF QEHLSRIPDY BACU004345/1-1807 LYEHIAADDR FTKYLSIGPI SKTINMLACW HREGPASSAF QEHLCRIPDY 401 450 ENSBTAP00000025201/1-732 LWLGLDGMKM Q--------- ---------- GTNGSQIWDT AFAIQALLEA ENSTTRP00000000334/1-733 LWLGLDGMKV Q--------- ---------- GTNGSQIWDT AFAIQALLEA bmy_18693T0/1-608 LWLGLDGMKV QCLDVVDAVP PAYVLCVSLG GTNGSQIWDT AFAIQALLEA BACU004345/1-1807 LWLGLDGMKV Q--------- ---------- GTNGSQIWDT AFAIQALLEA 451 500 ENSBTAP00000025201/1-732 RAQHRPEFWS CLRKAHEYLR ISQVPDNFPD YQKYYRHMSK GGFSFSTLDC ENSTTRP00000000334/1-733 GAQHRPEFSS CLQKAHEYLR VSQVPDNLPD YQKYYRQMSK GGFSFSTLDC bmy_18693T0/1-608 GAQHRPEFWS CLQKAHEYLR VSQVPDNLPD YQKYYRQMSK GGFSFSTLDC BACU004345/1-1807 GAQHRPEFSS CLQKAHEYLR VSQVPDNLPD YQKYYRQMSK GGFSFSTLDC 501 550 ENSBTAP00000025201/1-732 GWIVADCTAE ALKSILLLQE KCPFVSNHVP RERLFDTVAV LLSLRNPDGG ENSTTRP00000000334/1-733 GWIVADCTAE ALKSLLLLQE KCPFVTKHVP RERLFDAVAV LLSMRNPDGG bmy_18693T0/1-608 GWIVADCTAE ALKSLLLLQE KCPFVTKHVP QERLFDAVAV LLSMRNPDGG BACU004345/1-1807 GWIVADCTAE ALKSLLLLQE KCPFVTKHVP RERLFDAVAV LLSMRNPDGG 551 600 ENSBTAP00000025201/1-732 FATYETKRGG HLLELLNPSE VFGDIMIDYT YVECTSAVMQ ALKTFHKQFP ENSTTRP00000000334/1-733 FATYETKRGG HLLELLNPSE IFGDIMIDYT YVECTSAVMQ ALKHFHKQFP bmy_18693T0/1-608 FATYETKRGG HLLELLNPSE IFGDIMIDYT YVECTSAVMQ ALKHFHKQFP BACU004345/1-1807 FATYETKRGG HLLELLNPSE IFGDIMIDYT YVECTSAVMQ ALKHFHKQFP 601 650 ENSBTAP00000025201/1-732 DHRAGEIRET LEQGLQFCRQ KQRPDGSWEG SWGVCFTYGA WFGLEAFACM ENSTTRP00000000334/1-733 DHRAGEIRET LERGLQFCRQ KQRPDGSWEG SWGVCFTYGT YFGLEAFACM bmy_18693T0/1-608 DHRAGEIR-- ---------- ---------- ---------- ---------- BACU004345/1-1807 DHRAGEIRET LERGLQFCRQ KQRPDGSWEG SWGVCFTYGT CFGLEAFACM 651 700 ENSBTAP00000025201/1-732 GHTYHNGVAC AEISRACDFL LSRQMADGGW GEDFESCKQR RYVQSAQSQI ENSTTRP00000000334/1-733 GHTYRDGAAC AEVSQACDFL LSRQMADGGW GEDFESCEQR RYVQSARSQI bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 GHTYRDGAAC AEVSQACDFL LSRQMADGGW GEDFESCEQR RYVQSARSQI 701 750 ENSBTAP00000025201/1-732 HNTCWALMGL MAVRHPDVAA LERGVSYLLE KQLPNGDWPQ ENISGVFNKS ENSTTRP00000000334/1-733 HNTCWALMGL MAVRHPDVVA LERGVSYLLG KQLPNGDWPQ DNIAGVFNKS bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 HNTCWALMGL MAVRHPDVAA LERGVSYLLG KQLPNGDWPQ DNIAGVFNKS 751 800 ENSBTAP00000025201/1-732 CAISYTSYRN VFPIWTLGRF SRLHPESALT GHP------- ---------- ENSTTRP00000000334/1-733 CAISYTSYRN VFPIWALGRF SRLHPESALA GHP------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 CAISYTSYRN IFPIWALGRF SRLHPESALA GXXXXXGGGA GHASSRRGVR 801 850 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 PRALAVPGTR QNIPVWASAC AVPCAAVPVR EAAGAPPLRS LVAAGRRCFK 851 900 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 GDITRLRKAR RVELRALGVS GAPLGSGFPP PWGHGPHMRP EDTAMAEGSE 901 950 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 LTNRLMSENA DLKKQVRLVK ENQMLKRLLS ESCQESCGRG GRGLLMPKAP 951 1000 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 ACPEACSAGS AVPDFGRFNS GPDAPSQLQV SSLEDLLCSH APLPSEDDAS 1001 1050 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 PGRATSSPAP FRAFLSSPEL SAPHSSDWKL SPLLSPLQDP LADKTLLEPR 1051 1100 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 EVGRPKKVCF LESSLPSGDR TRRSYYLNEI QSFAGTEKDG RTVGEIAFQL 1101 1150 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 DRRILAYVFP GVTRLYGFTV SNIPEKIKQK RRRELTHRFL TLTARLERLG 1151 1200 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 YSRHVHPAFS ELLINTYGIL KQRPDLRANP LHSSPAALRK LVIDVVPPKF 1201 1250 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 LGDSLLLLNC LCGQALAQNC LRRTHSPTPA RALWPPTLLK PGEGRWPPGA 1251 1300 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 LQSGHLPGSF SAVVPVSSCW RGGLPKDQTA AGPRDLGIPS PGPVVTARGE 1301 1350 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 TAADADPTKA AWGARFREAH GWVIDAISRA VVQTPGCVLL DVDAGPSTNR 1351 1400 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 TVYTFVGRPE DVVEGALNAA RAAHRLIDMG RHRGEHPRMG ALDVCPFIPV 1401 1450 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 RGVTMDECVL CAQAFGQRLA EELGVPVYLY GEAARTASRQ SLPAIRAGEY 1451 1500 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 EALPEKLKQA EWAPDFGPSC FVPSWGATVT GARKFLIAFN VNLLSTREQA 1501 1550 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 HRIALDLREQ GRGKDRPGRL RKVQGIGWYL DEKNLAQVSM NLLDFEVTGL 1551 1600 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 HTVYEETCRE AQGLSLPVVG SQLVGLVPLK ALLDVAAFYC EKENLFILEE 1601 1650 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 GQRLRLVVNR LGLDSLSPFN PKERIIEYLV PEAGPGQSLV DQPLRTFVRE 1651 1700 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 VGARSAAPGG GSVAAASAAM GAALASMAGL MTYGRRQFEH LDATVRRLIP 1701 1750 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 PFHAAWAELT AMVDADARAF EAYLPVSHTF LCLLRQKATK LPKNTPEDKD 1751 1800 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 RRAAALQEGL KRAVAVPLAL AEMVTSLWPA LQELALCVNL ACRSDLQVAV 1801 1850 ENSBTAP00000025201/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000334/1-733 ---------- ---------- ---------- ---------- ---------- bmy_18693T0/1-608 ---------- ---------- ---------- ---------- ---------- BACU004345/1-1807 KALETGVFGA YFNVLINLKD VTDDAFKDQV RQHISGLLQE AKTQAALVLD 1851 1900 ENSBTAP00000025201/1-732 ------- ENSTTRP00000000334/1-733 ------- bmy_18693T0/1-608 ------- BACU004345/1-1807 QLEARQE