KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:25:23 2014 Check: 00 .. Name: ENSTTRP00000010400/1-730 Len: 761 Check: 2495 Weight: 1.00 Name: ENSP00000241305/1-756 Len: 761 Check: 6018 Weight: 1.00 Name: ENSBTAP00000025207/1-761 Len: 761 Check: 8328 Weight: 1.00 Name: bmy_20442T0/1-529 Len: 761 Check: 9625 Weight: 1.00 Name: BACU004730/1-529 Len: 761 Check: 9248 Weight: 1.00 // 1 50 ENSTTRP00000010400/1-730 ---------- ---------- --------QG AAVEDPDYYV QEIWSREPYY ENSP00000241305/1-756 MSRPGTATPA LALVL---LA VTLAGVGAQG AALEDPDYYG QEIWSREPYY ENSBTAP00000025207/1-761 LGPPGVTVPQ PVRQLERPFG WTLLGISGEA GSQHRPASEG GETWSLEPSY bmy_20442T0/1-529 ---------- ---------- ---------- ---------- ---------- BACU004730/1-529 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000010400/1-730 ARLEP--EPF SPPLPAGPGE EERKLRASEP RAPKKA-TKP KKAPKREKLA ENSP00000241305/1-756 ARPEPELETF SPPLPAGPGE -EWERRPQEP RPPKRA-TKP KKAPKREKSA ENSBTAP00000025207/1-761 ARREPEPEPF SPPLPAGPGA GERGPRPPQP RPPKKATTKP KKAPKREKLA bmy_20442T0/1-529 ---------- ---------- ---------- ---------- ---------- BACU004730/1-529 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000010400/1-730 PETPPPGKKS NRKGVKTKSS EKAAGDDHRV PVAREAVREG CPPLGLETLK ENSP00000241305/1-756 PEPPPPGKHS NKKVMRTKSS EKAANDDHSV RVAREDVRES CPPLGLETLK ENSBTAP00000025207/1-761 PQTPRPGKNI NRKGMRTKSS EKAASDDHGV PLARDAVREG CPPLGLETLK bmy_20442T0/1-529 ---------- ---------- ---------- ---------- ---------- BACU004730/1-529 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000010400/1-730 ITDFQLHAST SKRYGLGAHR GRLNIQAGIN ENDFYDGAWC AGRNDLHQWI ENSP00000241305/1-756 ITDFQLHAST VKRYGLGAHR GRLNIQAGIN ENDFYDGAWC AGRNDLQQWI ENSBTAP00000025207/1-761 ITDFQLHAST SKRYGLGAHR GRLNIQAGIN ENDFYDGAWC AGRNDLHQWI bmy_20442T0/1-529 ---------- ---------- ---------- ---------- ---------- BACU004730/1-529 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000010400/1-730 EVDARRLTKF TGVITQGRNS LWLXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000241305/1-756 EVDARRLTRF TGVITQGRNS LWLSDWVTSY KVMVSNDSHT WVTVKNGSGD ENSBTAP00000025207/1-761 EVDARRLTKF TGVITQGRNS LWLSDWVTSY KVMVSNDSHT WVTVKNGSGD bmy_20442T0/1-529 ---------- ---------- ---------- --MVSNDSHT WVTVKNGSGD BACU004730/1-529 ---------- ---------- ---------- --MVSNDSHT WVTVKNGSGD 251 300 ENSTTRP00000010400/1-730 XIFEGNSEKE IPVLNELPVP MVARYIRINP RSWFDNGSIC MRMEILGCPL ENSP00000241305/1-756 MIFEGNSEKE IPVLNELPVP MVARYIRINP QSWFDNGSIC MRMEILGCPL ENSBTAP00000025207/1-761 MIFEGNSEKE IPVLNELPVP MVARYIRINP QSWFDNGSIC MRMEILGCPL bmy_20442T0/1-529 MIFEGNSEKE IPVLNELPVP MVARYVRINP QSWFDNGSIC MRMEILGCPL BACU004730/1-529 MIFEGNSEKE IPVLNKLPVP MVARYIRINP QSWFDNGSIC MRMEVLGCPL 301 350 ENSTTRP00000010400/1-730 PDPNNYYHRR NEMTTTDDLD FKHHSYKEMR QLMKVVNEMC SNITRIYNIG ENSP00000241305/1-756 PDPNNYYHRR NEMTTTDDLD FKHHNYKEMR QLMKVVNEMC PNITRIYNIG ENSBTAP00000025207/1-761 PDPNNYYHRR NEMTTTDDLD FKHHNHKEMR QLMKVVNEMC PNITRIYNIG bmy_20442T0/1-529 PDPNNYYHRR NEMTTTDDLD FKHHNYKEMR QLMKVVNEMC SNITRIYNIG BACU004730/1-529 PDPNNYYHRR NEMTTTDDLD FKHHNYKEMR QLMKVVNEMC PNITRIYNIG 351 400 ENSTTRP00000010400/1-730 KSHQGLKLYA VEISDHPGEH EVGEPEFHYI AGAHGNEVLG RELMLLLMQF ENSP00000241305/1-756 KSHQGLKLYA VEISDHPGEH EVGEPEFHYI AGAHGNEVLG RELLLLLVQF ENSBTAP00000025207/1-761 KSHQGLKLYA VEISDHPGEH EVGEPEFHYI AGAHGNEVLG RELMLLLMQF bmy_20442T0/1-529 KSHQGLKLYA VEISDHPGEH EVGEPEFHYI AGAHGNEVLG RELMLLLMQF BACU004730/1-529 KSHQGLKLYA VEISDHPGEH EVGEPEFHYI AGAHGNEVLG RELMLLLMQF 401 450 ENSTTRP00000010400/1-730 LCQEYLARNS RIVRLVEETR IHIIPSLNPD GYEKAYEGGS ELGGWSLGRW ENSP00000241305/1-756 VCQEYLARNA RIVHLVEETR IHVLPSLNPD GYEKAYEGGS ELGGWSLGRW ENSBTAP00000025207/1-761 LCQEYLAGNL RIVRLVEETR IHILPSLNPD GYEKAYEGGS ELGGWSLGRW bmy_20442T0/1-529 LCQEYLARNS RIVHLVEETR IHIIPSLNPD GYEKAYEGGS ELGGWSLGRW BACU004730/1-529 LCQEYLARNS RIVHLVEETR IHIIPSLNPD GYEKAYEGGS ELGGWSLGRW 451 500 ENSTTRP00000010400/1-730 THDGIDINNN FPDLNTLLWG AEDRQNIPRK VPNHYIAIPE WFLSENATVA ENSP00000241305/1-756 THDGIDINNN FPDLNTLLWE AEDRQNVPRK VPNHYIAIPE WFLSENATVA ENSBTAP00000025207/1-761 THDGIDINNN FPDLNTLLWE AEDRQNIPRK VPNHYIAIPE WFLSENATVA bmy_20442T0/1-529 THDGIDINNN FPDLNTLLWG AEDRQNIPRK VPNHYVAIPE WFLSENATVA BACU004730/1-529 THDGIDINNN FPDLNTLLWG AEDRQNIPRK VPNHYVAIPE WFLSENATVA 501 550 ENSTTRP00000010400/1-730 VETRAVIAWM EKIPFVLGGN LQGGELVVAY PYDMARSTWQ MQEHTPTPDD ENSP00000241305/1-756 AETRAVIAWM EKIPFVLGGN LQGGELVVAY PYDLVRSPWK TQEHTPTPDD ENSBTAP00000025207/1-761 VETRAVIAWM EKIPFVLGGN LQGGELVVAY PYDMVRSLWK TQEHTPTPDD bmy_20442T0/1-529 VETRAVIAWM EKIPFVLGGN LQGGELVVAY PYDMVRSTWK TQEHTPTPDD BACU004730/1-529 VETRAVIAWM EKIPFVLGGN LQGGELVVAY PYDMVRSTWK TQEHTPTPDD 551 600 ENSTTRP00000010400/1-730 HVFRWLAYAY ASTHRLMTDA RRRVCHTEDF QKEDGTVNGA SWHTVAGSLN ENSP00000241305/1-756 HVFRWLAYSY ASTHRLMTDA RRRVCHTEDF QKEEGTVNGA SWHTVAGSLN ENSBTAP00000025207/1-761 HVFRWLAYSY ASTHRLMTDA RRRVCHTEDF QKEDGTVNGA SWHTVAGSLN bmy_20442T0/1-529 HVFRWLAYAY ASTHRLMTDA RRRVCHTEDF QKEDGTVNGA SWHTVAGSLN BACU004730/1-529 HVFRWLAYAY ASTHRLMTDA RRRVCHTEDF QKEDGTVNGA SWHTVAGSLN 601 650 ENSTTRP00000010400/1-730 DFSYLHTNCF ELSIYVGCDK YPHESELPEE WENNRESLIV FMEQXXXXXX ENSP00000241305/1-756 DFSYLHTNCF ELSIYVGCDK YPHESQLPEE WENNRESLIV FMEQVHRGIK ENSBTAP00000025207/1-761 DFSYLHTNCF ELSIYVGCDK YPHESELPEE WENNRESLIV FMEQVHRGIK bmy_20442T0/1-529 DFSYLHTNCF ELSIYVGCDK YPHESQLPEE WENNRESLIV FMEQVHRGIK BACU004730/1-529 DFSYLHTNCF ELSIYVGCDK YPHESQLPEE WENNRESLIV FMEQVHRGIK 651 700 ENSTTRP00000010400/1-730 XXXXXXXXXX XXXXXXXXXX XXXXXXXXSD GDYWRLLNPG EYMVTAKAEG ENSP00000241305/1-756 GLVRDSHGKG IPNAIISVEG INHDIRTAND GDYWRLLNPG EYVVTAKAEG ENSBTAP00000025207/1-761 GLVRDSHGKG IPNAVISVEG VNHDIRTASD GDYWRLLNPG EYVVTAKAEG bmy_20442T0/1-529 GLVRDLHGKG IPNAVISVEG VNHDIRTASD GDYWRLLNPG EYMVTAKAEG BACU004730/1-529 GLVRDLHGKG IPNAVISVEG VNHDIRTASD GDYWRLLNPG EYMVTAKAEG 701 750 ENSTTRP00000010400/1-730 FISSTKNCIV GYDMGATQCD FTLSKTNLAR IREIMEKFGK QPVSLPARRL ENSP00000241305/1-756 FTASTKNCMV GYDMGATRCD FTLSKTNMAR IREIMEKFGK QPVSLPARRL ENSBTAP00000025207/1-761 FTSSTKNCMV GYDMGATQCD FTLSKTNLAR IREIMEKFRK QPVSLPARRL bmy_20442T0/1-529 FTSSTKNCIV GYDMGATQCB FTLSKTNLAR IREIMEKFGK QPVSLPARRL BACU004730/1-529 FTSSTKNCIV GYDMGATQCD FTLSKTNLAR IREIMEKFGK QPVSLPARRL 751 800 ENSTTRP00000010400/1-730 KLRGRKRRQR G ENSP00000241305/1-756 KLRGQKRRQR G ENSBTAP00000025207/1-761 KLQGRKRRQR G bmy_20442T0/1-529 KLWARKRRQR G BACU004730/1-529 KLWARKRRQR G