KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:25:27 2014 Check: 00 .. Name: ENSP00000379208/1-579 Len: 1317 Check: 5023 Weight: 1.00 Name: ENSBTAP00000025240/1-578 Len: 1317 Check: 5546 Weight: 1.00 Name: bmy_07941T0/1-367 Len: 1317 Check: 1355 Weight: 1.00 Name: BACU003397/1-1313 Len: 1317 Check: 5708 Weight: 1.00 Name: ENSTTRP00000003505/1-572 Len: 1317 Check: 3741 Weight: 1.00 // 1 50 ENSP00000379208/1-579 --MNKSQEQV SFKDVCVDFT QEEWYLLDPA QKILYRDVIL ENYSNLVSVG ENSBTAP00000025240/1-578 --MNKSQEQV SFKDVCVDFT QEEWYLLDPA QKILYRDVIL ENYSHLVSVG bmy_07941T0/1-367 --MSKLNINR SHT------- ---WTTLPPP LRVKNEQI-- --------PG BACU003397/1-1313 KRNILLQEQV SFKDVCVDFT QEEWYLLDPA QKILYRDVIL ENYSHLVSVG ENSTTRP00000003505/1-572 --VNSKEEQV SFKDVCVDFT QEEWYLLDPA QKILYRDVIL ENYSHLVSVG 51 100 ENSP00000379208/1-579 YCITKPEVIF KIEQGEEPWI LEKGFPSQCH PERKWKVDDV LESSQENEDD ENSBTAP00000025240/1-578 NCITKPEVIF KIEQGEEPWI LEERFPKQWH SE-DWKVDDL IDSTQENQDE bmy_07941T0/1-367 NCIXKPEVIF KIEQGEEPWI LEERFPKQCR SE-DWKVEHL IESSQENEDE BACU003397/1-1313 NCITKPEVIF KIEQGEEPWI LEERFPKQCR SE-DWKVDDL IESSQENEDE ENSTTRP00000003505/1-572 NCITKPEVIF KIEQGEEPWI LEERFPKQCC SE-DWKVDDL IESSQENEDE 101 150 ENSP00000379208/1-579 HFWELLFHNN KTVSVENGDR GSKTFNLGTD PVSLRNYPYK ICDSCEMNLK ENSBTAP00000025240/1-578 HFWQLAFTSN KTLSTDSGDR VKKTLNLGTD SIPSSNFLYK ICDSCEVSLK bmy_07941T0/1-367 LFWQLAFT-N QTLSTDSGDR VRKTLNLGTD SVPSRNFLYK ICDTCEMSLK BACU003397/1-1313 LFWQLAFT-N QTLSTDSGDR VRKTLNLGTD SVPSRNFLYK ICDTCEMSLK ENSTTRP00000003505/1-572 HFWQLAFT-N QTLSTDSGDR VRKTLNLGTD SVPSRNFLYK VCDTCEMSLK 151 200 ENSP00000379208/1-579 NISGLIISKK NCSRKKPDEF NVCEKLLLDI RHEKIPIGEK SYKYDQKRNA ENSBTAP00000025240/1-578 NISGLIINRK NYSGKKPDEF NVYEKLLLDI GHDKAPLGGK SYKYNQKKNV bmy_07941T0/1-367 NISGLIINRK NYSGKKPDEF NVYEKLLLDI QHEKTPTGGK SYKYNQKKNV BACU003397/1-1313 NISGLIINRK NYSGKKPDEF NVYEKLLLDI RHEKTPTGGK SYKYNQKKNV ENSTTRP00000003505/1-572 NISGLIINRK NYSGKKPDEF NVYEKLLLDI RHEKTPTGGK SYKYNQKK-- 201 250 ENSP00000379208/1-579 INYHQDLSQP SFGQSFEYSK NGQGFHDEAA FFTNKRSQIG ETVCKYNECG ENSBTAP00000025240/1-578 LNHGQDLTQS IFDQPFEYNE NGRGNHGEAA FFTNKKVQIG ETHCKYNECG bmy_07941T0/1-367 LNRSQDLTQP IFDPPFEYNE NGQGCHGEAD FFTNKKAQIG EAHCKYNECG BACU003397/1-1313 LNRSQDLTQP IFDPPFEYNE NGQGCHGEAD FFTNKKAQIG EAHCKYNECG ENSTTRP00000003505/1-572 -NRSPDLTQP IFDPHFEYNE NGQGCHGEAD SFTNKKAQIG ETHCKYNECG 251 300 ENSP00000379208/1-579 RTFIESLKLN ISQRPHLEME PYGCSICGKS FCMNLRFGHQ RALTKDNPYE ENSBTAP00000025240/1-578 RNFIQSLKLS LSQRTLFEME PCECSICGKS FYMDLRFGHQ RALMGDSPYE bmy_07941T0/1-367 RTFIQSLKLN LSQRTHLEVE PYECSICGKS FYMDLRLGHQ RALTGENP-- BACU003397/1-1313 RTFIQSLKLS LSQRTHLEME PYECSICGKS FYMDLRLGHQ RALTGENP-- ENSTTRP00000003505/1-572 RTFIQSLKLN LSQRTHLEME PYECSICGKS FYMDLRLGHQ RALTGENP-- 301 350 ENSP00000379208/1-579 YNEYGEIFCD NSAFIIHQGA YTRKILREYK VSDKTWEKSA LLKHQIVHMG ENSBTAP00000025240/1-578 YNEYGQIFCG NSTFVIHQGT YTGKIPHEYK VSHKTWEKSA LFKHQIVHMG bmy_07941T0/1-367 YNEYGQIFCD SSAFIIHQGN YTRKIPHEYK VSHKMWEKST LFRHQIVHMG BACU003397/1-1313 YNEYGQIFYD SSAFIIHQGN YTRKIPHEYK VSHKMWEKST LFRHQIVHMG ENSTTRP00000003505/1-572 YNEYGQIFCD SSAFIIHQGN YTRKIPHEYK VSHKMWEKST LFRHQIVHMG 351 400 ENSP00000379208/1-579 GKSYDYNENG SNFSKKSHLT QLRRAHTGEK TFECGECGKT FWEKSNLTQH ENSBTAP00000025240/1-578 GKPYEHNENG NTFNKKSHLT QLRRAHSGEK TFVCGECGKT FWEKSNLTQH bmy_07941T0/1-367 EKPYEHNENG NTFNKKSHLT QLRRAHSGEK TFECGECGKT FWE------- BACU003397/1-1313 EKPYEHNENG NTFNKKSHLT QLRRAHSGEK TFECGECGKT FWEKSNLTQH ENSTTRP00000003505/1-572 EKPYEHNENG NTFNKKSHLT QLRRAHSGEK TFECGECGKT FWEKSNLTQH 401 450 ENSP00000379208/1-579 QRTHTGEKPY ECTECGKAFC QKPHLTNHQR THTGEKPYEC KQCGKTFCVK ENSBTAP00000025240/1-578 QRTHTGEKPY ECTECGKSFC QKPHLTNHQR THTGEKPYEC KQCGKTFCVK bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 QRTHTGEKPY ECTECGKSFC QKPHLTNHQR THTGEKPYEC KQCGKTFCVK ENSTTRP00000003505/1-572 QRTHTGEKPY ECTECGKAFC QKPHLTNHQR THTGEKPYEC KQCGKTFCVK 451 500 ENSP00000379208/1-579 SNLTEHQRTH TGEKPYECNA CGKSFCHRSA LTVHQRTHTG EKPFICNECG ENSBTAP00000025240/1-578 SNLTEHQRTH TGEKPYECNA CGKSFCHRSA LTVHQRTHTG EKPFICNECG bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 SNLTEHQRTH TGEKPYECNA CGKSFCHRSA LTVHQRTHTG EKPFICNECG ENSTTRP00000003505/1-572 SNLTEHQRTH TGEKPYECNA CGKSFCHRSA LTVHQRTHTG EKPFICNECG 501 550 ENSP00000379208/1-579 KSFCVKSNLI VHQRTHTGEK PYKCNECGKT FCEKSALTKH QRTHTGEKPY ENSBTAP00000025240/1-578 KSFCVKSNLI VHQRTHTGEK PYKCNECGKT FCEKSALTKH QRTHTGEKPY bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 KSFCVKSNLI VHQRTHTGEK PYKCNECGKT FCEKSALTKH QRTHTGEKPY ENSTTRP00000003505/1-572 KSFCVKSNLI VHQRTHTGEK PYKCNECGKT FCEKSALTKH QRTHTGEKPY 551 600 ENSP00000379208/1-579 ECNACGKTFS QR-------- ---------- ---------- ---------- ENSBTAP00000025240/1-578 ECNGCGKTFS QR-------- ---------- ---------- ---------- bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 ECNGCGKTFS QRYEGMKSRM ELSVCGPGKV PLATMQWVSR TEQNILLQGL ENSTTRP00000003505/1-572 ECNGCGKTFS QR-------- ---------- ---------- ---------- 601 650 ENSP00000379208/1-579 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025240/1-578 ---------- ---------- ---------- ---------- ---------- bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 VSFKDVSINF TQAEWQWLDS AQKILYRDVM LENYSNLVSV GCLIPKPDVI ENSTTRP00000003505/1-572 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000379208/1-579 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025240/1-578 ---------- ---------- ---------- ---------- ---------- bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 SQLEQGEEPW ITEVEFSNQS LPEKVWRGQN IQDQQSSQFI LIKNKTLINE ENSTTRP00000003505/1-572 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000379208/1-579 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025240/1-578 ---------- ---------- ---------- ---------- ---------- bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 KNISCAKAFT MGINPVGSRK VNSKCDSYKK SLKYISELMI SNRNCVRKLT ENSTTRP00000003505/1-572 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000379208/1-579 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025240/1-578 ---------- ---------- ---------- ---------- ---------- bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 DEGNVCGKSR FNTKLEELSA EINEYDKNEK DISHNEYLVQ LQTLEPDCGF ENSTTRP00000003505/1-572 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000379208/1-579 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025240/1-578 ---------- ---------- ---------- ---------- ---------- bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 NESGKHFYKA VSDSQKRSHG GKKPSNEYEN TFIQKSVISI YEKTHIQKPF ENSTTRP00000003505/1-572 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000379208/1-579 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025240/1-578 ---------- ---------- ---------- ---------- ---------- bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 GSNEHGQSCT VSKVLNHRAH TREKPFGCDS FGYSSTIIVH QRNQSKETAH ENSTTRP00000003505/1-572 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000379208/1-579 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025240/1-578 ---------- ---------- ---------- ---------- ---------- bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 EYPQNMNAVI QTAQLTEHQR AHTGQESSEY NECEQAFKIS NFKYKRIDTV ENSTTRP00000003505/1-572 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000379208/1-579 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025240/1-578 ---------- ---------- ---------- ---------- ---------- bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 KKLYEFTECR NALYKKSHFS HIQRTHIEKS YECNHCCRTF NRKAHLTKHQ ENSTTRP00000003505/1-572 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000379208/1-579 ---------- ---------- -SVLTKHQRI HTRVKALSTS ---------- ENSBTAP00000025240/1-578 ---------- ---------- -SVLTKHQRI HTRVKALSAS ---------- bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 RIHTGEKPYE CNECGKAFYN KAHLTRHQRI HTGEKPYECS ECGKTFCVKS ENSTTRP00000003505/1-572 ---------- ---------- -SVLTKHQRI HTRVKALSAS ---------- 1051 1100 ENSP00000379208/1-579 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025240/1-578 ---------- ---------- ---------- ---------- ---------- bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 TLTVHQRTHT GEKPYECIKC GKTFYVKSKL TVHQRTHTGE KPYECTECGI ENSTTRP00000003505/1-572 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSP00000379208/1-579 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025240/1-578 ---------- ---------- ---------- ---------- ---------- bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 TFSHKSTLTE HQRTHTGEKP YVCTECGKTF CVKSKLTVHQ RIHTGEKPYE ENSTTRP00000003505/1-572 ---------- ---------- ---------- ---------- ---------- 1151 1200 ENSP00000379208/1-579 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025240/1-578 ---------- ---------- ---------- ---------- ---------- bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 CIECGKTFSG NSHLTVHQRK HTGEKPFECT ECGKTFSHKS SLVEHQRTHT ENSTTRP00000003505/1-572 ---------- ---------- ---------- ---------- ---------- 1201 1250 ENSP00000379208/1-579 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025240/1-578 ---------- ---------- ---------- ---------- ---------- bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 GEKPYECTEC GKTFSSNSNF KVHQRTHTGE KPYECTDCGK TYSHKSSLNE ENSTTRP00000003505/1-572 ---------- ---------- ---------- ---------- ---------- 1251 1300 ENSP00000379208/1-579 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025240/1-578 ---------- ---------- ---------- ---------- ---------- bmy_07941T0/1-367 ---------- ---------- ---------- ---------- ---------- BACU003397/1-1313 HCRRHSGQKP CECDKCGTSF CHNLVLTKYQ RIPKGKKNYE YNLYKKSFLL ENSTTRP00000003505/1-572 ---------- ---------- ---------- ---------- ---------- 1301 1350 ENSP00000379208/1-579 ---------- ------- ENSBTAP00000025240/1-578 ---------- ------- bmy_07941T0/1-367 ---------- ------- BACU003397/1-1313 EGKLHSTSDS TPGRRSL ENSTTRP00000003505/1-572 ---------- -------