KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:25:36 2014 Check: 00 .. Name: bmy_20080T0/1-590 Len: 590 Check: 6630 Weight: 1.00 Name: ENSTTRP00000007409/1-394 Len: 590 Check: 3712 Weight: 1.00 Name: ENSP00000268717/1-423 Len: 590 Check: 4800 Weight: 1.00 Name: ENSBTAP00000025255/1-423 Len: 590 Check: 6012 Weight: 1.00 // 1 50 bmy_20080T0/1-590 MASALEQFVN SVRQLSAQGQ MTQLCELINK SGELLAKNLS HLDTVLGALD ENSTTRP00000007409/1-394 ---------- ---------- ---------K SGELLAKNLS HLDTVLGALD ENSP00000268717/1-423 MASALEQFVN SVRQLSAQGQ MTQLCELINK SGELLAKNLS HLDTVLGALD ENSBTAP00000025255/1-423 MASALEQFVN SVRQLSAQGQ MTQLCELINK SGELLAKNLS HLDTVLGALD 51 100 bmy_20080T0/1-590 VQEHSLGVLA VLFVKFSMPS VPDFETLFSQ VQLFISTCNG EHIRYATDTF ENSTTRP00000007409/1-394 VQEHSLGVLA VLFVKFSMPS VPDFETLFSQ VQLFISTCNG EHIRYATDTF ENSP00000268717/1-423 VQEHSLGVLA VLFVKFSMPS VPDFETLFSQ VQLFISTCNG EHIRYATDTF ENSBTAP00000025255/1-423 VQEHSLGVLA VLFVKFSMPS VPDFETLFSQ VQLFISTCNG EHIRYATDTF 101 150 bmy_20080T0/1-590 AGLCHQLTNA LVERKQPLRG IGVLKQAIDK MQMNTNQLTS VHADLCQLCL ENSTTRP00000007409/1-394 AGLCHQLTNA LVERKQPLRG IGVLKQAIDK MQMNTNQLTS VHADLCQLCL ENSP00000268717/1-423 AGLCHQLTNA LVERKQPLRG IGILKQAIDK MQMNTNQLTS IHADLCQLCL ENSBTAP00000025255/1-423 AGLCHQLTNA LVERKQPLRG IGVLRQAIDK MQMNTNQLTS VHADLCQLCL 151 200 bmy_20080T0/1-590 LAKCFKPALP YLDVDMVDIC KENGAYEAKH FLCYYYYGGM VYTGLKNFER ENSTTRP00000007409/1-394 LAKCFKPALP YLDVDMVDIC KENGAYEAKH FLCYYYYGGM VYTGLKNFER ENSP00000268717/1-423 LAKCFKPALP YLDVDMMDIC KENGAYDAKH FLCYYYYGGM IYTGLKNFER ENSBTAP00000025255/1-423 LAKCFKPALP YLDVDMVDIC KENGAYDAKH FLCYYYYGGM VYTGLKNFER 201 250 bmy_20080T0/1-590 ALYFYEQAIA TPAMAVSHIM LEAYKKYILV SLILLGKVQQ LPKYTSQIVG ENSTTRP00000007409/1-394 ALYFYEQAIA TPAMAVSHIM LEAYKKYILV SLILLGKVQQ LPKYTSQIVG ENSP00000268717/1-423 ALYFYEQAIT TPAMAVSHIM LESYKKYILV SLILLGKVQQ LPKYTSQIVG ENSBTAP00000025255/1-423 ALYFYEQAIT TPAMAVSHIM LESYKKYILV SLILLGKVQQ LPKYTSQIVG 251 300 bmy_20080T0/1-590 RFIKPLSNAY HELAQVYSTN NPSELRNLVT KHSETFTRDN NMGLVKQCLS ENSTTRP00000007409/1-394 RFIKPLSNAY HELAQVYSTN NPSELRTLVT KHSETFTRDN NMGLVKQCLS ENSP00000268717/1-423 RFIKPLSNAY HELAQVYSTN NPSELRNLVN KHSETFTRDN NMGLVKQCLS ENSBTAP00000025255/1-423 RFIKPLSNAY HELAQVYSTN NPSELRSLVT KHSEIFTRDN NMGLVKQCLS 301 350 bmy_20080T0/1-590 SLYKKNIQRL TKTFLTLSLQ DMASRVQLSG PQEAEKYVLH MIEDGEIFAS ENSTTRP00000007409/1-394 SLYKKNIQRL TKTFLTLSLQ DMASRVQLSG PQEAEKYVLH MIEDGEIFAS ENSP00000268717/1-423 SLYKKNIQRL TKTFLTLSLQ DMASRVQLSG PQEAEKYVLH MIEDGEIFAS ENSBTAP00000025255/1-423 SLYKKNIQRL TKTFLTLSLQ DMASRVQLSG PQEAEKYVLH MIEDGEIFAS 351 400 bmy_20080T0/1-590 INQKDGMVSF HDNPEKYNNP AMLHNIDQEM LRCIELDERL RAMDQEITVN ENSTTRP00000007409/1-394 INQKDGMVSF HDNPEKYNNP AMLHNIDQEM LRCIELDERL RAMDQEITVN ENSP00000268717/1-423 INQKDGMVSF HDNPEKYNNP AMLHNIDQEM LKCIELDERL KAMDQEITVN ENSBTAP00000025255/1-423 INQKDGMVSF HDNPEKYNNP AMLHNIDQEM LKCIELDERL KAMDQEITVN 401 450 bmy_20080T0/1-590 PQFVQKVTEA PSFTEWAGRG RVASSIGSVS LCPETISGRF TETYSLGTFP ENSTTRP00000007409/1-394 PQFVQK---- ---------- ----SMGS-- --QEDDSGNK PSSYS----- ENSP00000268717/1-423 PQFVQK---- ---------- ----SMGS-- --QEDDSGNK PSSYS----- ENSBTAP00000025255/1-423 PQFVQK---- ---------- ----SMGS-- --QEDDSGNK PSSYS----- 451 500 bmy_20080T0/1-590 DSRLEVCLGM RVGVLDLPPP YTGWRRRGVG VRGWRETLGQ GRQAHCLSPS ENSTTRP00000007409/1-394 ---------- ---------- ---------- ---------- ---------- ENSP00000268717/1-423 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025255/1-423 ---------- ---------- ---------- ---------- ---------- 501 550 bmy_20080T0/1-590 LPEHGVTGGR FGKQAIQLLL KPVLILSFRE AFAMAGAENQ SLCKERKTFS ENSTTRP00000007409/1-394 ---------- ---------- ---------- ---------- ---------- ENSP00000268717/1-423 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025255/1-423 ---------- ---------- ---------- ---------- ---------- 551 600 bmy_20080T0/1-590 NFKACCGFIY PQINVVIALN LPFCFKLFEH WRVFCITFFL ENSTTRP00000007409/1-394 ---------- ---------- ---------- ---------- ENSP00000268717/1-423 ---------- ---------- ---------- ---------- ENSBTAP00000025255/1-423 ---------- ---------- ---------- ----------