KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:25:41 2014 Check: 00 .. Name: ENSP00000267082/1-798 Len: 810 Check: 6264 Weight: 1.00 Name: ENSBTAP00000025279/1-800 Len: 810 Check: 8148 Weight: 1.00 Name: ENSTTRP00000002605/1-789 Len: 810 Check: 7072 Weight: 1.00 Name: bmy_04672T0/1-606 Len: 810 Check: 976 Weight: 1.00 Name: BACU018274/1-800 Len: 810 Check: 6167 Weight: 1.00 // 1 50 ENSP00000267082/1-798 MVALPMVLVL LLVLSRGESE LDAKIPSTGD ATEWRNPHLS MLGSCQPAPS ENSBTAP00000025279/1-800 MVALSMVLVF LLALSRGESE LDAKSSSPQE ATEWRDPNLS LPGSCQPAPS ENSTTRP00000002605/1-789 MVALSMVLVF LLALSRGESE LDVKSSSPQE TTEWGDPGLS LPGSCQPAPS bmy_04672T0/1-606 MVALSMVLVF LLALSRGESE LDTKISSPQE TTEWGDPGLS LPGSCQPAPS BACU018274/1-800 MVALSMVLVF LLALSRGESE LDTKISSPQE TTEWRAPGLS LPGSCQPAPS 51 100 ENSP00000267082/1-798 CQKCILSHPS CAWCKQL--- -------NFT ASGEAEARRC ARREELLARG ENSBTAP00000025279/1-800 CQKCILSHPS CAWCKQL--- -------NFT ASGEAEARRC ARREELLARG ENSTTRP00000002605/1-789 CQKCILSHPS CAWCKQL--- -------NFT ASGEAEVRRC ALREELLARG bmy_04672T0/1-606 CQKCILSHPS CAWCKQLGPD APPLAAQNFT ASGEAEVRRC ALREELLARG BACU018274/1-800 CQKCILSHPS CAWCKQL--- -------NFT ASGEAEVRRC ALREELLARG 101 150 ENSP00000267082/1-798 CPLEELEEPR GQQEVLQDQP LSQGARGEGA TQLAPQRVRV TLRPGEPQQL ENSBTAP00000025279/1-800 CLPGELEEPR GRQEVLQDDP LSQGTRGEGA TQLAPQRVRV TLRPGEPQQL ENSTTRP00000002605/1-789 CPPEELEEPR GRQEVLQDEP LSQGTRGEGA TQLAPQRVRV TLRPGEPQQL bmy_04672T0/1-606 CPPGELEEPR GRQEVLQDKP LSQGTRGEGA TQLAPQRVRV TLRPGEPQQL BACU018274/1-800 CPPGELEEPR GRRGGLQGEP LSQGTRGEGA TQLAPQRVRV TLRPGEPQQL 151 200 ENSP00000267082/1-798 QVRFLRAEGY PVDLYYLMDL SYSMKDDLER VRQLGHALLV RLQEVTHSVR ENSBTAP00000025279/1-800 RVRFLRAEGY PVDLYYLMDL SYSMKDDLER VRQLGHALLV RLQEVTDSVR ENSTTRP00000002605/1-789 RVRFLRAEGY PVDLYYLMDL SYSMKDDLER VRQLGHALLV RLQEVTHSVR bmy_04672T0/1-606 RVRFLRAEGY PVDLYYLMDL SYSMKDDLER VRQLGHALLV RLQEVTHSVR BACU018274/1-800 RVRFLRAEGY PVDLYYLMDL SYSMKDDLER VRQLGHALLV RLQEVTHSVR 201 250 ENSP00000267082/1-798 IGFGSFVDKT VLPFVSTVPS KLRHPCPTRL ERCQSPFSFH HVLSLTGDAQ ENSBTAP00000025279/1-800 IGFGSFVDKT VLPFVSTVPS KLRHPCPSRL ESCQPPFSFH HVLSLTGDAE ENSTTRP00000002605/1-789 IXXXXXXDKV L--FVSTVP- KLRHPCPTRL ERCQPPFSFH HVLPLTRDAK bmy_04672T0/1-606 IGFGSFVDKM VLPFVSTVPS KLRHPCPTRL ERCQPPFSFH HVLSLTGDAK BACU018274/1-800 IGFGSFVDKM VLPFVSTVPS KLRHPCPTRL ERCQPPFSFH HVLSLTGDAK 251 300 ENSP00000267082/1-798 AFEREVGRQS VSGNLDSPEG GFDAILQAAL CQEQIGWRNV SRLLVFTSDD ENSBTAP00000025279/1-800 AFEREVGRQN VSGNLDLPEG GFDAILQAAL CQKQIGWRNV SRLLVFTSDD ENSTTRP00000002605/1-789 AFEREVGRQS VSGNLDS-EG GFDAILQAAL CQEQIGWRNV SRLLVFTSDD bmy_04672T0/1-606 AFEREVGRQS VSGNLDSPEG GFDAILQAAL CQEQIGWRNV SRLLVFTSDD BACU018274/1-800 AFEREVGRQS VSGNLDSPEG GFDAILQAAL CQEQIGWRNV SRLLVFTSDD 301 350 ENSP00000267082/1-798 TFHTAGDGKL GGIFMPSDGH CHLDSNGLYS RSTEFDYPSV GQVAQALSAA ENSBTAP00000025279/1-800 TFHTAGDGKL GGIFMPSDGH CHLDSNGLYS RSPEFDYPSV GQVAQALSAA ENSTTRP00000002605/1-789 TFHTAGDGKL GGIFMPSDGH CHLDSNGLYS RSPEFDYPSV GQVAQALSAA bmy_04672T0/1-606 TFHTAGDGKL GGIFMPSDGH CHLDSNGLYS RSPEFDYPSV GQVAQALSAA BACU018274/1-800 TFHTAGDGKL GGIFMPSDGH CHLDSNGLYS RSPEFDYPSV GQVAQALSAA 351 400 ENSP00000267082/1-798 NIQPIFAVTS AALPVYQELS KLIPKSAVGE LSEDSSNVVQ LIMDAYNSLS ENSBTAP00000025279/1-800 NIQPIFAVTS ATLPVYRELS NLIPKSAVGE LSEDSSNVVQ LIMDAYNRLS ENSTTRP00000002605/1-789 NIQPIFAVTG ATLPVYQELS KLIPKSAVGE LSEDSSNVVQ LIMDAYNS-- bmy_04672T0/1-606 NIQPIFAVTG ATLPVYQELS KLIPKSAVGE LSEDSSNVVQ LIMDAYNSLS BACU018274/1-800 NIQPIFAVTG ATLPVYQELS KLIPKSAVGE LSEDSSNVVQ LIMDAYNSLS 401 450 ENSP00000267082/1-798 STVTLEH--S SLPPGVHISY ESQCEGPEKR EGKAEDRGQC NHVRINQTVT ENSBTAP00000025279/1-800 STVTLEHEHS LLPPGVRISY ESQCGDSEKR LSEAGDWVQC NQVRINQTVN ENSTTRP00000002605/1-789 ---TXXXXXX XXXXXXXXXY -FQCGGHEKR QDEAGQ-GQC NHVRINQTVN bmy_04672T0/1-606 STVTLEHERS LLPPGVRISY DSQCGGPEKR QDEAGDRGQC NHVRINQTVN BACU018274/1-800 STVTLEHERS LLPPGVRISY DSQCGGPEKR QHEAGDRGQC NHVRINQTVN 451 500 ENSP00000267082/1-798 FWVSLQATHC LPEPHLLRLR ALGFSEELIV ELHTLCDCNC SDTQPQAPHC ENSBTAP00000025279/1-800 FWVTFQATHC LPEPHLLRFR ARGFSEELTV ELHTVCDCNC SDAQLQAPHC ENSTTRP00000002605/1-789 FLVTLQATHC LPEPHLLRFR ARGFSEELTV ELHTLCDCNC SDTQLQAPHC bmy_04672T0/1-606 FLVTLQATHC LPEPHLLRFR ARGFSEELTV ELHTLCDCNC SDTQLQAPHC BACU018274/1-800 FLVTLQATHC LPEPHLLRFR ARGFSEELTV ELHTLCDCNC SDTQLQAPHC 501 550 ENSP00000267082/1-798 SDGQGHLQCG VCSCAPGRLG RLCECSVAEL SSPDLESGCR APNGTGPLCS ENSBTAP00000025279/1-800 SDGQGHLQCG VCSCVPGRLG RLCECSEAEL SSPDLESGCR VPNGTGPLCS ENSTTRP00000002605/1-789 SDGKGHLQCG VCSCVPGHLG RLCECSEAEL SSLDLESGCR APNGTGPLCS bmy_04672T0/1-606 SDGQGHLQCG VCSCVPGHLG RLCECSEAEL SSLDLESGCR APNGTGPLCS BACU018274/1-800 SDGQGHLQCG VCSCVPGHLG RLCECSEAEL SSLDLESGCR APNGTGPLCN 551 600 ENSP00000267082/1-798 GKGHCQCGRC SCSGQSSGHL CECDDASCER HEGILCGGFG RCQCGVCHCH ENSBTAP00000025279/1-800 GRGQCQCGRC TCSGQSSGRL CECDDASCER HEGILCGGFG RCQCGVCHCH ENSTTRP00000002605/1-789 GRGRCQCGRC TCSGQSSGRL CECDDASCER HEGILCGGFG RCQCGVCHCH bmy_04672T0/1-606 GRGRCQCGRC TCSGQSSGRL CECDDASCER HEGILCGGTW R--------- BACU018274/1-800 GRGRCQCGRC TCSGQSSGRL CECDDASCER HEGILCGGFG RCQCGVCHCH 601 650 ENSP00000267082/1-798 ANRTGRACEC SGDMDSCISP EGGLCSGHGR CKCNRCQCLD GYYGALCDQC ENSBTAP00000025279/1-800 ANRTGRACEC SGDTDNCVSP DGGFCNGHGH CNCDRCQCDD GYYGALCDQC ENSTTRP00000002605/1-789 ANRTGRACEC SGDTDNCVSP EGGLCNGHGY CNCNRCQCLD GYYGALCDQC bmy_04672T0/1-606 ---------L WGE------- ------GRGQ S--------- ---------- BACU018274/1-800 ANRTGRACEC SGDTDNCVSP EGGLCNGRGY CTCNRCQCLD GYYGALCDQC 651 700 ENSP00000267082/1-798 PGCKTPCERH RDCAECGAFR TGPLATNCST ACAHTNVTLA LAPILDDGWC ENSBTAP00000025279/1-800 SGCKTPCETH RDCAECKAFG TGPLARNCST ACAHANMTLV LTPTLDDSWC ENSTTRP00000002605/1-789 SGCKTPCERH RDCAECGAFG TGPLAVNCSL ACAHANVTLA LAPILDDGWC bmy_04672T0/1-606 ---------- ---------- ---------- ---------- -------GFX BACU018274/1-800 SGCKTPCERH RDCAECGAFG TGPLAMNCSL ACAHANVTLA LAPILDDGWC 701 750 ENSP00000267082/1-798 KERTLDNQLF FFLVEDDARG TVVLRVRPQE KGADHTQAIV LGCVGGIVAV ENSBTAP00000025279/1-800 KERTQDNQLF FFLAEDEAGG RVVLTVRPPE EGADHTRIIV LGCVGGIVAV ENSTTRP00000002605/1-789 KERTHDNQLF FFLAEDEAGG RVMLRVRPPE KGSDHTQIIV LGCVGGIVVV bmy_04672T0/1-606 K--------- ---------- ---------- ---------- -----GV--- BACU018274/1-800 KERTHDNQLF FFLAEDEARG RVMLTVKPPE KGADYTQIIV LGCVGGIVAV 751 800 ENSP00000267082/1-798 GLGLVLAYRL SVEIYDRREY SRFEKEQQQL NWKQDSNPLY KSAITTTINP ENSBTAP00000025279/1-800 GLGLVLAYRL SVEIYDRREF HRFEKERQHL NWKQDHNPLY QSAITTTVNP ENSTTRP00000002605/1-789 GLGLVLAYRL SVEIYDRREY SRFEKEQQQL HWKQENNPLY KSAITTTVNP bmy_04672T0/1-606 ---------- ---------- ---------- ---------- ---------- BACU018274/1-800 GLGLVLAYRL SVEIYDRREY SRFEKEQQQL KWKQDNNPLY KSAITTTVNP 801 850 ENSP00000267082/1-798 RFQEADSPTL ENSBTAP00000025279/1-800 RFQEADSPVL ENSTTRP00000002605/1-789 RFQEAEGAPL bmy_04672T0/1-606 ---------- BACU018274/1-800 CFQEAESAPL