KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:25:42 2014 Check: 00 .. Name: bmy_05952T0/1-556 Len: 624 Check: 15 Weight: 1.00 Name: ENSP00000275230/1-617 Len: 624 Check: 3457 Weight: 1.00 Name: BACU014321/1-584 Len: 624 Check: 1819 Weight: 1.00 Name: ENSBTAP00000025291/1-621 Len: 624 Check: 6719 Weight: 1.00 Name: ENSTTRP00000009160/1-616 Len: 624 Check: 864 Weight: 1.00 // 1 50 bmy_05952T0/1-556 MRLHIALKWV MHSLTEVVTT PILSTRP--- ---------- -GCGMFTLLS ENSP00000275230/1-617 ---MVPVENT EGPSLLNQKG TAVETEG--- -SGSRHPPWA RGCGMFTFLS BACU014321/1-584 ---MVPVENA EGPSLLKPKG PAAETDGSDR ASGGRHPPWA RGCGMFTLLS ENSBTAP00000025291/1-621 ---MVPVENA EGPSLLKPKG RAAETDGSDR ASGGPHPPWA RGCGMYTLLS ENSTTRP00000009160/1-616 ---MVPVENA EGPSLLKPKG PAAETDGSDR DSGGRHPPWA RGCGMFTLLS 51 100 bmy_05952T0/1-556 SVTAAVSGFL VGYELGLISG ALLQIRTLLA LTCHEQEMVV SSLLIGALLA ENSP00000275230/1-617 SVTAAVSGLL VGYELGIISG ALLQIKTLLA LSCHEQEMVV SSLVIGALLA BACU014321/1-584 SVTAAVSGFL VGYELGLISG ALLQIRTLLA LTCHEQEMVV SSLLIGALLA ENSBTAP00000025291/1-621 SVTAAVSGFL VGYELGIISG ALLQIRTLLV LTCHEQEMVV SSLLIGALLA ENSTTRP00000009160/1-616 SVTAAVSGFL VGYELGLISG ALLQIRTLLA LTCHEQEMVV SSLLIGALLA 101 150 bmy_05952T0/1-556 SLIGGVLIDR CGRRAAIILS SCLLGLGSLV LIISLSYAAL IAGRIAIGVS ENSP00000275230/1-617 SLTGGVLIDR YGRRTAIILS SCLLGLGSLV LILSLSYTVL IVGRIAIGVS BACU014321/1-584 SLIGGVLIDR CGRRAAIILS SCLLGLGSLV LIISLSYTAL IAGRIAIGVS ENSBTAP00000025291/1-621 SLIGGVLIDR YGRRAAIILS SCLLGLGSLV LIISLSYTTL IGGRIAIGVF ENSTTRP00000009160/1-616 SLIGGVLIDR CGRRAAIILS SCLLGLGSLV LIISLSYAAL IAGRIAIGVS 151 200 bmy_05952T0/1-556 ISLSSIATCV YIAEIAPQHK RGLLVSLNEL MIVIGILFAY ISNYAFANVS ENSP00000275230/1-617 ISLSSIATCV YIAEIAPQHR RGLLVSLNEL MIVIGILSAY ISNYAFANVF BACU014321/1-584 ISLSSIATCV YIAEIAPQHK RGLLVSLNEL MIVIGILFAY ISNYAFANVS ENSBTAP00000025291/1-621 ISLSSTATCV YIAEIAPQHR RGLLVSLNEL MIVIGILFAY ISNYAFANIS ENSTTRP00000009160/1-616 ISLSSIATCV YIAEIALQHK RGLLVSLNEL MIVIGILFAY ISNYAFANVS 201 250 bmy_05952T0/1-556 HGWKYMFGLV IPLGVLQAIA MYFLPPSPRF LVMKGHEEAA SKVLGKLRAI ENSP00000275230/1-617 HGWKYMFGLV IPLGVLQAIA MYFLPPSPRF LVMKGQEGAA SKVLGRLRAL BACU014321/1-584 HGWKYMFGLV IPLGVLQAIA MYFLPPSPRF LVMKGHEEAA SKVLGKLRAI ENSBTAP00000025291/1-621 HGWKYMFGLV IPLGVLQAIA MYFLPPSPRF LVMKGHEEAA SKVLGKLRAI ENSTTRP00000009160/1-616 HGWKYMFGLV IPLGVLQAIA MYFLPPSPRF LVMKGHEEAA SKVLGKLRAI 251 300 bmy_05952T0/1-556 SDTTEELTAI KSSLKDEYQY SFGDLFRSKD NMRTRIMIGL TLVFFVQITG ENSP00000275230/1-617 SDTTEELTVI KSSLKDEYQY SFWDLFRSKD NMRTRIMIGL TLVFFVQITG BACU014321/1-584 SDTTEELTAI KSSLKDEYQY SFGDLFRSKD NMRTRIMIGL TLVFFVQITG ENSBTAP00000025291/1-621 SDTTEELTVI KSSLKDEYQY SFWDLFRSKD NMRTRIMIGL MLVFFVQITG ENSTTRP00000009160/1-616 SDTTEELTVI KSSLKDEYQY SFGDLFRSKD NMRTRIMIGL TLVFFVQITG 301 350 bmy_05952T0/1-556 QPNILFYAST VLKSVGFQSN EAASLASTGV GVVKVISTIP ATLLVDHVGS ENSP00000275230/1-617 QPNILFYAST VLKSVGFQSN EAASLASTGV GVVKVISTIP ATLLVDHVGS BACU014321/1-584 QPNILFYAST VLKSVGFQSN EAASLASTGV GVVKVISTIP ATLLVDHVGS ENSBTAP00000025291/1-621 QPNILFYAST VLKSVGFQSN EAASLASTGV GVVKVISTIP ATLLVDQVGS ENSTTRP00000009160/1-616 QPNILFYAST VLKSVGFQSN EAASLASTGV GVVKVLSTIP ATLLVDHVGS 351 400 bmy_05952T0/1-556 KTLLCVGSSV MAASLVTMGI VNLNIHMNFT NICRNHSPIN QSLDESVFYG ENSP00000275230/1-617 KTFLCIGSSV MAASLVTMGI VNLNIHMNFT HICRSHNSIN QSLDESVIYG BACU014321/1-584 KTLLCVGSSV MAASLVTMGI VNLNIHMNFT NICRNHSPIN QSLDESVFYG ENSBTAP00000025291/1-621 KTFLCIGSSV MAASLVTMGI VNLNIHMNFT SICRNHSPIN QSLDESVFYG ENSTTRP00000009160/1-616 KTLLCVGSSV MAASLVTMGI VNLNIHMNFT NICRNHSPIN QSLDESVLYG 401 450 bmy_05952T0/1-556 PGNLSASNDT LRESFKGMAS R-RSSLRPTR NDMDKRGEMT LASLSNAGLS ENSP00000275230/1-617 PGNLSTNNNT LRDHFKGISS HSRSSLMPLR NDVDKRGETT SASLLNAGLS BACU014321/1-584 PANLSASNDT LRESFKGMAS HSRSSLRPMR NDMDKRGETT LASLSNAGLS ENSBTAP00000025291/1-621 PGNLSASNDT LRESFKGMTF HSRSSLRPTR NDINGKGETT LASLPNAGLS ENSTTRP00000009160/1-616 PGNLSASNDT LRESFKGMAS RSRS--LPTR ND-DRRGETT SASLSNAGLS 451 500 bmy_05952T0/1-556 QTEYQIITDP ADIPAFLKWL SLASLLVYVA AFSIGLGPMP WLVLSEIFPG ENSP00000275230/1-617 HTEYQIVTDP GDVPAFLKWL SLASLLVYVA AFSIGLGPMP WLVLSEIFPG BACU014321/1-584 QTEYQIITDP ADVPAFLKWL SLASLLVYVA AFSIGLGPMP WLVLSEIFPG ENSBTAP00000025291/1-621 QTEYRIVTDS ADVPTFLKWL SLASLLVYVA AFSIGLGPMP WLVLSEIFPG ENSTTRP00000009160/1-616 QTEYQVITDP ADVPAFLKWL SLASLLVYVA AFSIGLGPMP WLVLSEIFPG 501 550 bmy_05952T0/1-556 GIRGRAMALT SSMNWGINLL ISLTFLTVTE QPLKDYELVM RTTLTL---- ENSP00000275230/1-617 GIRGRAMALT SSMNWGINLL ISLTFLTVTD LIGLPWVCFI YTIMSLASLL BACU014321/1-584 GIRGRAMALT SSMNWGINLL ISLTFLTVTD RF------HK YQEVGVEEQI ENSBTAP00000025291/1-621 GIRGRAMALT SSMNWGINLL ISLTFLTVTD LIGLPWVCFI YTVMSLASLV ENSTTRP00000009160/1-616 GIRGRAMALT SSMNWGINLL ISLTFLTVTD LIGLPCVCFI YTIMSLASLV 551 600 bmy_05952T0/1-556 ---------- ---------- ---RHYLHWV LC-------- -------KKE ENSP00000275230/1-617 FVVMFIPETK GCSLEQISME LAKVNYVKNN ICFMSHHQEE LVPKQPQKRK BACU014321/1-584 EIRAQVPIMK D--------E VAKQFCISNS --FLGAASSS VY-------- ENSBTAP00000025291/1-621 FVIVFIPETK GCSLEQISVE LAKENYVKNN ICFMSHHREE LVPKQLQKRK ENSTTRP00000009160/1-616 FVVVFIPETK GCSLEQISME LAKENYVKNN ICFMSHHQEE LVPKQLQKRK 601 650 bmy_05952T0/1-556 PGHNVDNCKH VLG------- ---- ENSP00000275230/1-617 PQEQLLECNK LCGRGQSRQL SPET BACU014321/1-584 -QGAFL---- ---WGKPST- ---- ENSBTAP00000025291/1-621 PQEQFLESKK LRGKGQPRQL SSEV ENSTTRP00000009160/1-616 PQDQFLESKK LRGRGQPRQL PE--