KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:25:45 2014 Check: 00 .. Name: BACU000328/1-812 Len: 862 Check: 8660 Weight: 1.00 Name: ENSTTRP00000003191/1-843 Len: 862 Check: 6125 Weight: 1.00 Name: ENSP00000361245/1-861 Len: 862 Check: 5087 Weight: 1.00 Name: bmy_19785T0/1-831 Len: 862 Check: 8481 Weight: 1.00 Name: ENSBTAP00000025307/1-861 Len: 862 Check: 4065 Weight: 1.00 // 1 50 BACU000328/1-812 MAGPGPGAAL ESPRQLLGRV RFLAEAAKSL RAGRPLPAAL AFVPREVLYK ENSTTRP00000003191/1-843 MAGPGPGAAL ESPRQLLGRV RFLAEAAKSL RAGRPLPAAL AFVPREVLYK ENSP00000361245/1-861 MAGPGPGAVL ESPRQLLGRV RFLAEAARSL RAGRPLPAAL AFVPREVLYK bmy_19785T0/1-831 MAGPGPGAAL ESPRQLLGRV RFLAEAAKSL RAGRPLPAAL AFVPREVLYK ENSBTAP00000025307/1-861 MAGPGPGAAL ESPRQLLGRV RFLAEAAKSL RAGRPLPAAL AFVPREVLYK 51 100 BACU000328/1-812 LYKDPAGPSR VLLPVWEAEG PGLRVGATGP APCTGS---- --------RR ENSTTRP00000003191/1-843 LYKDPAGPSR VLLPVWEAEG PGLRVGATGP ATCTGSGPLR AARDSIELRR ENSP00000361245/1-861 LYKDPAGPSR VLLPVWEAEG LGLRVGAAGP APGTGSGPLR AARDSIELRR bmy_19785T0/1-831 LYKDPAGPSR VLLPVWEAEG PGLRVGATGP ATCTGSGPLR AARDSIELRR ENSBTAP00000025307/1-861 LYKDPAGPSR VLLPVWEAEG LGLRVGATGP APGTGSGALR AARDSIELRR 101 150 BACU000328/1-812 PRQHRAPARR LRAHHGRGAV QRPRALGEAD QGAAGGTPGR LRAGRRLAAG ENSTTRP00000003191/1-843 GACVRTTGEE LCNGHGLWVK LTKEQLAE-H LGDCGLDEGW LLVCRPAEGG ENSP00000361245/1-861 GACVRTTGEE LCNGHGLWVK LTKEQLAE-H LGDCGLQEGW LLVCRPAEGG bmy_19785T0/1-831 GACVRTTGEE LCNGHGLWVK LTKEQLAE-H LGDCGLDEGW LLVCRPAEGG ENSBTAP00000025307/1-861 GACVRTTGEE LCNGHGLWVK LTKEQLAE-H LGDCGLDEGW LLVCRPAEGG 151 200 BACU000328/1-812 VPPGRRRGPP RTHRH----- ---------- ---------- --SRPPP--- ENSTTRP00000003191/1-843 ARLVPIDTPD HLQRQQQLFG VDYRPVLRWE QVVDLTYSHR LGSRPQPAEA ENSP00000361245/1-861 ARLVPIDTPN HLQRQQQLFG VDYRPVLRWE QVVDLTYSHR LGSRPQPAEA bmy_19785T0/1-831 ARLVPIDTPD HLQRQQQLFG VDYRPVLRWE QVVDLTYSHR LGSRPQPAEA ENSBTAP00000025307/1-861 ARLVPIDTPD HLQRQQQLFG VDYRPVLRWE QVVDLTYSHR LGSRPQPAEA 201 250 BACU000328/1-812 -TAAAALWSG LPPGAQMGTG GGP-DILASP GIKASAGRGI YRSRTKA--- ENSTTRP00000003191/1-843 YTEAVQRLLY VPPTWTYECD EDLIHFLYDH LGKEDENLGS VKQYVESIDV ENSP00000361245/1-861 YAEAVQRLLY VPPTWTYECD EDLIHFLYDH LGKEDENLGS VKQYVESIDV bmy_19785T0/1-831 YTEAVQRLLY VPPTWTYECD EDLIHFLYDH LGKEDENLGS VKQYVESIDV ENSBTAP00000025307/1-861 YTEAVQRLLY VPPTWTYECD EDLIHFLYDH LGKEDENLGS VKQYVESIDV 251 300 BACU000328/1-812 ---TEEFNVS CLTDSNADTY WESDGSQCQH WVRLTMKKGT IVKKLLLTVD ENSTTRP00000003191/1-843 SSYTEEFNVS CLTDSNADTY WESDGSQCQH WVRLTMKKGT IVKKLLLTVD ENSP00000361245/1-861 SSYTEEFNVS CLTDSNADTY WESDGSQCQH WVRLTMKKGT IVKKLLLTVD bmy_19785T0/1-831 SSYTEEFNVS CLTDSNADTY WESDGSQCQH WVRLTMKKGT IVKKLLLTVD ENSBTAP00000025307/1-861 SSYTEEFNVS CLTDSNADTY WESDGSQCQH WVRLTMKKGT IVKKLLLTVD 301 350 BACU000328/1-812 TTDDNFMPKR VVIYGGEGDN LKKLSDVSID ETLIGDVCVL EDMTVHLPVI ENSTTRP00000003191/1-843 TTDDNFMPKR VVIYGGEGDN LKKLSDVSID ETLIGDVCVL EDMTVHLPVI ENSP00000361245/1-861 TTDDNFMPKR VVVYGGEGDN LKKLSDVSID ETLIGDVCVL EDMTVHLPII bmy_19785T0/1-831 TTDDNFMPKR VVIYGGEGDN LKKLSDVSID ETLIGDVCVL EDMTVHLPVI ENSBTAP00000025307/1-861 TTDDNFMPKR VVVYGGEGDN LKKLSDVSID ETLIGDVCVL EDMTVHLPII 351 400 BACU000328/1-812 EIRIVECRDD GIDVRLRGVK IKSSRQRELG LNADLFQPTS LVRYPRLEGT ENSTTRP00000003191/1-843 EIRIVECRDD GIDVRLRGVK IKSSRQRELG LNADLFQPTS LVRYPRLEGT ENSP00000361245/1-861 EIRIVECRDD GIDVRLRGVK IKSSRQRELG LNADLFQPTS LVRYPRLEGT bmy_19785T0/1-831 EIRIVECRDD GIDVRLRGVK IKSSRQRELG LNADLFQPTS LVRYPRLEGT ENSBTAP00000025307/1-861 EIRIVECRDD GIDVRLRGVK IKSSRQRELG LNADLFQPTN LVRYPRLEGT 401 450 BACU000328/1-812 DPEVLYRRAV LLQRFIKILD SVLHHLVPAW DHTLGTFSEI KQVKQFLLLS ENSTTRP00000003191/1-843 DPEVLYRRAV LLQRFIKILD SVLHHLVPAW DHTLGTFSEI KQVKQFLLLS ENSP00000361245/1-861 DPEVLYRRAV LLQRFIKILD SVLHHLVPAW DHTLGTFSEI KQVKQFLLLS bmy_19785T0/1-831 DPEVLYRRAV LLQRFIKILD SVLHHLVPAW DHTLGTFSEI KQVKQFLLLS ENSBTAP00000025307/1-861 DPEVLYRRAV LLQRFIKILD SVLHHLVPAW DHTLGTFSEI KQVKQFLLLS 451 500 BACU000328/1-812 RQRPGLVAQC LRDSESSKPS FMPRLYINRR LAMEHRACPL RDPACKNAVF ENSTTRP00000003191/1-843 RQRPGLVAQC LRDSESSKPS FMPRLYINRR LAMEHRACPL KDPACKNAVF ENSP00000361245/1-861 RQRPGLVAQC LRDSESSKPS FMPRLYINRR LAMEHRACPS RDPACKNAVF bmy_19785T0/1-831 RQRPGLVAQC LRDSESSKPS FMPRLYINRR LAMEHRACPL RDPACKNAVF ENSBTAP00000025307/1-861 RQRPGLVAQC LRDSESSKPS FMPRLYINRR LAMEHRACPL RDPACKNAVF 501 550 BACU000328/1-812 TQVYEGLKPS DKYEKPLDYR WPMRYDQWWE CKFIAEGIID QGGGFRDSLA ENSTTRP00000003191/1-843 TQVYEGLKPS DKYEKPLDYR WPMRYDQWWE CKFIAEGIID QGGGFRDSLA ENSP00000361245/1-861 TQVYEGLKPS DKYEKPLDYR WPMRYDQWWE CKFIAEGIID QGGGFRDSLA bmy_19785T0/1-831 TQVYEGLKPS DKYEKPLDYR WPMRYDQWWE CKFIAEGIID QGGGFRDSLA ENSBTAP00000025307/1-861 TQVYEGLKPS DKYEKPLDYR WPMRYDQWWE CKFIAEGIID QGGGFRDSLA 551 600 BACU000328/1-812 DMSEELCPSS ADTPVPLPFF VRTANQGNGT GEARDMYVPN PSCRDFAKYE ENSTTRP00000003191/1-843 DMSEELCPSS ADTPVPLPFF VRTANQGNGT GEARDMYVPN PSCRDFAKYE ENSP00000361245/1-861 DMSEELCPSS ADTPVPLPFF VRTANQGNGT GEARDMYVPN PSCRDFAKYE bmy_19785T0/1-831 DMSEELCPSS ADTPVPLPFF VRTANQGNGT GEARDMYVPN PSCRDFAKYE ENSBTAP00000025307/1-861 DMSEELCPSS ADTPVPLPFF VRTANQGNGT GEARDMYVPN PSCRDFAKYE 601 650 BACU000328/1-812 WIGQLMGAAL RGKEFLVLAL PGFVWKQLSG EEVSWSKDFP AVDSVLVKLL ENSTTRP00000003191/1-843 WIGQLMGAAL RGKEFLVLAL PGFVWKQLSG EEVSWSKDFP AVDSVLVKLL ENSP00000361245/1-861 WIGQLMGAAL RGKEFLVLAL PGFVWKQLSG EEVSWSKDFP AVDSVLVKLL bmy_19785T0/1-831 WIGQLMGAAL RGKEF----- ---------- ---------- -----LVKLL ENSBTAP00000025307/1-861 WIGQLMGAAL RGKEFLVLAL PGFVWKQLSG EEVSWSKDFP AVDSVLVKLL 651 700 BACU000328/1-812 EVMEGMDKET FEFKFGKELT FTTVLSDQQV VELIPGGAGI VVGFEDRSRF ENSTTRP00000003191/1-843 EVMEGMDKET FEFKFGKELT FTTVLSDQQV VELIPGGAGI VVGFEDRSRF ENSP00000361245/1-861 EVMEGMDKET FEFKFGKELT FTTVLSDQQV VELIPGGAGI VVGYGDRSRF bmy_19785T0/1-831 EVMEGMDKET FEFKFGKELT FTTVLSDQQV VELIPGGAGI VVGFEDRSRF ENSBTAP00000025307/1-861 EVMEGMDKET FEFKFGKELT FTTVLSDQQV VELIPGGSGI VVGYEDRSRF 701 750 BACU000328/1-812 IQLVQKARLE ESKEQVSAMQ AGLLKVVPQA VLDLLTWQEL EKKVCGDPEV ENSTTRP00000003191/1-843 IQLVQKARLE ESKEQVSAMQ AGLLKVVPQA VLDLLTWQEL EKKVCGDPEV ENSP00000361245/1-861 IQLVQKARLE ESKEQVAAMQ AGLLKVVPQA VLDLLTWQEL EKKVCGDPEV bmy_19785T0/1-831 IQLVQKARLE ESKEQVSAMQ AGLLKVVPQA VLDLLTWQEL EKKVCGDPEV ENSBTAP00000025307/1-861 IQLVQKARLE ESKEQVAAMQ AGLLKVVPQA VLDLLTWQEL EKKVCGDPEV 751 800 BACU000328/1-812 TVDALRKLTR FEDFEPSDTR VQYFWEALNN FTNEDRSRFL RFVTGRSRLP ENSTTRP00000003191/1-843 TVDALRKLTR FEDFEPSDTR VQYXXDKL-- ---------- ----GLLPCP ENSP00000361245/1-861 TVDALRKLTR FEDFEPSDSR VQYFWEALNN FTNEDRSRFL RFVTGRSRLP bmy_19785T0/1-831 TVDALRKLTR FEDFEPSDTR VQYFWEALNN FTNEDRSRFL RFVTGRSRLP ENSBTAP00000025307/1-861 TVDALRKLTR FEDFEPSDTR VQYFWEALNN FTNEDRSRFL RFVTGRSRLP 801 850 BACU000328/1-812 ARIYIYPDKL GYETTDALPE SSTCSSTLFL PHYASAKVCE EKLRYAAYNC ENSTTRP00000003191/1-843 THIHV-SDPC PYETTDAL-E SSTCSSTLFL PHYASAKVCE EKLRYAAYNC ENSP00000361245/1-861 ARIYIYPDKL GYETTDALPE SSTCSSTLFL PHYASAKVCE EKLRYAAYNC bmy_19785T0/1-831 ARIYIYPDKL GYETTDALPE SSTCSSTLFL PHYASAKVCE EKLRYAAYNC ENSBTAP00000025307/1-861 ARIYIYPDKL GYETTDALPE SSTCSSTLFL PHYASAKVCE EKLRYAAYNC 851 900 BACU000328/1-812 VAIDTDMSPW EE ENSTTRP00000003191/1-843 VAIDTDMSPW EE ENSP00000361245/1-861 VAIDTDMSPW EE bmy_19785T0/1-831 VAIDTDMSPW EE ENSBTAP00000025307/1-861 VAIDTDMSPW EE